RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 KLF6Q99612 283 aaPredicted RBP11.86□□□□□ -0.51
USP46-204ENST00000503060 STARD7Q9NQZ5 370 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 CREBZFQ9NS37 354 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 IGSF9Q9P2J2 1179 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 GRID1Q9ULK0 1009 aa11.86□□□□□ -0.51
USP46-204ENST00000503060 PATJQ8NI35 1801 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 CXorf49A8MYA2 514 aaPredicted RBP11.85□□□□□ -0.51
USP46-204ENST00000503060 TMEM189-UBE2V1I3L0A0 370 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 GOLGA8RI6L899 631 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 NCAM2O15394 837 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 FSBPO95073 299 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 IGLV3-25P01717 112 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 PSMB4P28070 264 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 GRIK1P39086 918 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 MTFR1Q15390 333 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 DBN1Q16643 649 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 PDK4Q16654 411 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 LACTB2Q53H82 288 aaPredicted RBP11.85□□□□□ -0.51
USP46-204ENST00000503060 LRRC8BQ6P9F7 803 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 LVRNQ6Q4G3 990 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 SPATA21Q7Z572 469 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 NPWQ8N729 165 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 RNF34Q969K3 372 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 SKA1Q96BD8 255 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 SMYD2Q9NRG4 433 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 TBC1D13Q9NVG8 400 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 OR12D3Q9UGF7 316 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 ZNF180Q9UJW8 692 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 PCDHA11Q9Y5I1 949 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 SCAMP3O14828 347 aaKnown RBP11.85□□□□□ -0.51
USP46-204ENST00000503060 TM9SF1O15321 606 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 FAM155BO75949 473 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 LRIG2O94898 1065 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 SUN1O94901 812 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 OR4Q2P0C623 313 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 TPP2P29144 1249 aaPredicted RBP11.85□□□□□ -0.51
USP46-204ENST00000503060 OR1G1P47890 313 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 PAPOLAP51003 745 aaKnown RBP11.85□□□□□ -0.51
USP46-204ENST00000503060 SLC5A3P53794 718 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 SLC18A2Q05940 514 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 PPIDQ08752 370 aaKnown RBP11.85□□□□□ -0.51
USP46-204ENST00000503060 IFRD2Q12894 506 aaPredicted RBP11.85□□□□□ -0.51
USP46-204ENST00000503060 ARHGEF6Q15052 776 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 SPRED3Q2MJR0 410 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 CGB2Q6NT52 195 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 LILRB1Q8NHL6 650 aaPredicted RBP11.85□□□□□ -0.51
USP46-204ENST00000503060 STAMBPL1Q96FJ0 436 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 SERAC1Q96JX3 654 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 C1orf74Q96LT6 269 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 TRIM56Q9BRZ2 755 aaKnown RBP11.85□□□□□ -0.51
USP46-204ENST00000503060 BRD8Q9H0E9 1235 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 CCDC68Q9H2F9 335 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 ACTR5Q9H9F9 607 aaPredicted RBP11.85□□□□□ -0.51
USP46-204ENST00000503060 TMEM165Q9HC07 324 aa11.85□□□□□ -0.51
USP46-204ENST00000503060 HMX1Q9NP08 348 aaPredicted RBP11.85□□□□□ -0.51
USP46-204ENST00000503060 FAM159BA6NKW6 160 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 KCNK1O00180 336 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 ARVCFO00192 962 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 EIF3FO00303 357 aaPredicted RBP11.84□□□□□ -0.51
USP46-204ENST00000503060 OAZ2O95190 189 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 PTPN3P26045 913 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 EPHB2P29323 1055 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 ACTN3Q08043 901 aaPredicted RBP11.84□□□□□ -0.51
USP46-204ENST00000503060 GALNT2Q10471 571 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 EIF4EBP2Q13542 120 aaPredicted RBP11.84□□□□□ -0.51
USP46-204ENST00000503060 SLC39A12Q504Y0 691 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 BTBD8Q5XKL5 378 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 STEAP4Q687X5 459 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 ERAP2Q6P179 960 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 CFAP161Q6P656 301 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 TRMT10BQ6PF06 316 aaKnown RBP11.84□□□□□ -0.51
USP46-204ENST00000503060 FAM47EQ6ZV65 393 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 SH2D5Q6ZV89 423 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 PID1Q7Z2X4 250 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 PPHLN1Q8NEY8 458 aaKnown RBP11.84□□□□□ -0.51
USP46-204ENST00000503060 SUN5Q8TC36 379 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 TCP10LQ8TDR4 215 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 GRAMD1AQ96CP6 724 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 FTHL17Q9BXU8 183 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 PITPNM3Q9BZ71 974 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 ZCWPW1Q9H0M4 648 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 ABCC13Q9NSE7 274 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 KLHL8Q9P2G9 620 aaPredicted RBP11.84□□□□□ -0.51
USP46-204ENST00000503060 KANSL3Q9P2N6 904 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 PRG3Q9Y2Y8 225 aaPredicted RBP11.84□□□□□ -0.51
USP46-204ENST00000503060 WDR27A2RRH5 827 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 SDR42E2A6NKP2 422 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 C2orf81A6NN90 581 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 TBKBP1A7MCY6 615 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 TRIM49D1C9J1S8 452 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 IRAK2O43187 625 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 KRT37O76014 449 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 GNRH1P01148 92 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 SNRPAP09012 282 aaKnown RBP11.84□□□□□ -0.51
USP46-204ENST00000503060 CSH1P0DML2 217 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 CSH2P0DML3 217 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 MX2P20592 715 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 CYP2C18P33260 490 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 SERPINB6P35237 376 aa11.84□□□□□ -0.51
USP46-204ENST00000503060 DNAJC3Q13217 504 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 231.6 ms