RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 MORC3Q14149 939 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 PROX2Q3B8N5 592 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 SETMARQ53H47 684 aaPredicted RBP6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 EFHC1Q5JVL4 640 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 RABGAP1LQ5R372 815 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 SYPL2Q5VXT5 272 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 CXorf57Q6NSI4 855 aaKnown RBP6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 ARCQ7LC44 396 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 TAC4Q86UU9 113 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 CACUL1Q86Y37 369 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 DCP2Q8IU60 420 aaKnown RBP6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 MMAAQ8IVH4 418 aaKnown RBP6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 LSMEM2Q8N112 164 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 CCAR2Q8N163 923 aaKnown RBP6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 CARNMT1Q8N4J0 409 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 DCBLD1Q8N8Z6 715 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 FAM181AQ8N9Y4 354 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 TMEM145Q8NBT3 493 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 TMIEQ8NEW7 156 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 CLEC4CQ8WTT0 213 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 OR8D1Q8WZ84 308 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 BAP1Q92560 729 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 NT5C3BQ969T7 300 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 FAM149B1Q96BN6 582 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 ERLEC1Q96DZ1 483 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 WBP1Q96G27 269 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 SERAC1Q96JX3 654 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 CNDP2Q96KP4 475 aaKnown RBP6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 C1orf74Q96LT6 269 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 KREMEN1Q96MU8 473 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 FEM1AQ9BSK4 669 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 PRORYQ9H606 182 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 GPR27Q9NS67 375 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 CYTH4Q9UIA0 394 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 SLCO3A1Q9UIG8 710 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 PAXBP1Q9Y5B6 917 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 OR51B4Q9Y5P0 310 aa6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 SMG1Q96Q15 3661 aaKnown RBP6.29□□□□□ -1.4
LSM3P4-201ENST00000502948 IGSF10Q6WRI0 2623 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 TBC1D3DA0A087WVF3 549 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 TBC1D3IA0A087WXS9 549 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 TBC1D3EA0A087X179 549 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 TBC1D3KA0A087X1G2 549 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 TBC1D3FA6NER0 549 aaPredicted RBP6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 PPP1R3GB7ZBB8 358 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 TBC1D3LB9A6J9 549 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 E5RJQ4 531 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 ATXN7O15265 892 aaPredicted RBP6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 RRP8O43159 456 aaKnown RBP6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 IL1BP01584 269 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 TBC1D3HP0C7X1 549 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 JUPP14923 745 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 NOS2P35228 1153 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 ACTN2P35609 894 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 CTSOP43234 321 aaPredicted RBP6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 CDH4P55283 916 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 KRT83P78385 493 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 CDK17Q00537 523 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 LRMPQ12912 555 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 PDCLQ13371 301 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 STAT4Q14765 748 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 CCDC40Q4G0X9 1142 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 ZC3H12AQ5D1E8 599 aaKnown RBP6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 BRMS1LQ5PSV4 323 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 AGBL4Q5VU57 503 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 RAP1GAP2Q684P5 730 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 TBC1D3GQ6DHY5 549 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 TBC1D3CQ6IPX1 549 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 C19orf48Q6RUI8 117 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 DHRS13Q6UX07 377 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 ZNF783Q6ZMS7 281 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 RRAGAQ7L523 313 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 SLC26A9Q7LBE3 791 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 SETD3Q86TU7 594 aaPredicted RBP6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 CHSY1Q86X52 802 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 SPATS2Q86XZ4 545 aaKnown RBP6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 PLPP6Q8IY26 295 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 TBC1D3Q8IZP1 549 aaPredicted RBP6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 APCDD1Q8J025 514 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 LGI2Q8N0V4 545 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 CFAP52Q8N1V2 620 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 STK40Q8N2I9 435 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 SH2D3CQ8N5H7 860 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 C1orf131Q8NDD1 294 aaKnown RBP6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 OR14C36Q8NHC7 312 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 SNRNP27Q8WVK2 155 aaKnown RBP6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 ASB12Q8WXK4 309 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 SHC3Q92529 594 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 KAT5Q92993 513 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 MYEOVQ96EZ4 313 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 CCDC114Q96M63 670 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 NOX5Q96PH1 765 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 MIS12Q9H081 205 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 MTG2Q9H4K7 406 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 ST7Q9NRC1 585 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 AASDHPPTQ9NRN7 309 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 EVA1BQ9NVM1 165 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 KLHL11Q9NVR0 708 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 ARHGEF38Q9NXL2 777 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 STIM2Q9P246 746 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms