RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 OR52K1Q8NGK4 314 aa12.24□□□□□ -0.45
NUP54-202ENST00000502850 GIMAP7Q8NHV1 300 aa12.24□□□□□ -0.45
NUP54-202ENST00000502850 DQX1Q8TE96 717 aaKnown RBP12.24□□□□□ -0.45
NUP54-202ENST00000502850 RSPH1Q8WYR4 309 aa12.24□□□□□ -0.45
NUP54-202ENST00000502850 UTP4Q969X6 686 aaKnown RBP12.24□□□□□ -0.45
NUP54-202ENST00000502850 MCUR1Q96AQ8 359 aa12.24□□□□□ -0.45
NUP54-202ENST00000502850 RSRC1Q96IZ7 334 aaKnown RBP12.24□□□□□ -0.45
NUP54-202ENST00000502850 SUSD3Q96L08 255 aa12.24□□□□□ -0.45
NUP54-202ENST00000502850 TEKT5Q96M29 485 aa12.24□□□□□ -0.45
NUP54-202ENST00000502850 CEP41Q9BYV8 373 aa12.24□□□□□ -0.45
NUP54-202ENST00000502850 PCDHB8Q9UN66 801 aa12.24□□□□□ -0.45
NUP54-202ENST00000502850 FNDC1Q4ZHG4 1894 aaPredicted RBP12.24□□□□□ -0.45
NUP54-202ENST00000502850 MYO16Q9Y6X6 1858 aa12.24□□□□□ -0.45
NUP54-202ENST00000502850 GYG2O15488 501 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 ZBTB24O43167 697 aaPredicted RBP12.23□□□□□ -0.45
NUP54-202ENST00000502850 IRAK2O43187 625 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 ADAMTS4O75173 837 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 ANXA9O76027 345 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 MYL4P12829 197 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 CCL5P13501 91 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 BDNFP23560 247 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 DNAJB1P25685 340 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 HOXC13P31276 330 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 CD52P31358 61 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 CCR1P32246 355 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 CRADDP78560 199 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 PDE1CQ14123 709 aaPredicted RBP12.23□□□□□ -0.45
NUP54-202ENST00000502850 PPP2R5DQ14738 602 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 UGP2Q16851 508 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 FAM26DQ5JW98 314 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 BTBD8Q5XKL5 378 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 PDPK2PQ6A1A2 396 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 SPATA2LQ8IUW3 424 aaPredicted RBP12.23□□□□□ -0.45
NUP54-202ENST00000502850 NPWQ8N729 165 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 FAM13CQ8NE31 585 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 PIWIL2Q8TC59 973 aaKnown RBP12.23□□□□□ -0.45
NUP54-202ENST00000502850 PTCD2Q8WV60 388 aaKnown RBP12.23□□□□□ -0.45
NUP54-202ENST00000502850 EDEM1Q92611 657 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 TSNARE1Q96NA8 513 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 PKMYT1Q99640 499 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 RTP3Q9BQQ7 232 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 TRIM56Q9BRZ2 755 aaKnown RBP12.23□□□□□ -0.45
NUP54-202ENST00000502850 MECRQ9BV79 373 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 RNF208Q9H0X6 261 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 SMOC2Q9H3U7 446 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 RNPEPL1Q9HAU8 725 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 SOX13Q9UN79 622 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 NOD1Q9Y239 953 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 ANKRD6Q9Y2G4 727 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.23□□□□□ -0.45
NUP54-202ENST00000502850 C15orf41Q9Y2V0 281 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 SHROOM3Q8TF72 1996 aa12.23□□□□□ -0.45
NUP54-202ENST00000502850 CCDC195A0A1B0GUA6 201 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 F5H423 210 aaPredicted RBP12.22□□□□□ -0.45
NUP54-202ENST00000502850 CACNG3O60359 315 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 PGK1P00558 417 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 SERPINA6P08185 405 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 NFKB1P19838 968 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 POLD2P49005 469 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 CCNG1P51959 295 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 CACNA2D1P54289 1103 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 PRKAA2P54646 552 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 NRG1Q02297 640 aaPredicted RBP12.22□□□□□ -0.45
NUP54-202ENST00000502850 ANO4Q32M45 955 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 DNAL1Q4LDG9 190 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 ANKRD20A4Q4UJ75 823 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 MBLAC2Q68D91 279 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 ARHGAP18Q8N392 663 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 GABPB2Q8TAK5 448 aaPredicted RBP12.22□□□□□ -0.45
NUP54-202ENST00000502850 PXYLP1Q8TE99 480 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 TRIB2Q92519 343 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 SERPINB11Q96P15 392 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 AGAP3Q96P47 875 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 AGO3Q9H9G7 860 aaKnown RBP12.22□□□□□ -0.45
NUP54-202ENST00000502850 SNX15Q9NRS6 342 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 PPARGC1AQ9UBK2 798 aaKnown RBP12.22□□□□□ -0.45
NUP54-202ENST00000502850 MCM8Q9UJA3 840 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 NR2E3Q9Y5X4 410 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 FRMPD3Q5JV73 1810 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 PLXNA3P51805 1871 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 TMEM114B3SHH9 223 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 ANP32DO95626 131 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 POMCP01189 267 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 PROCP04070 461 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 ASGR1P07306 291 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 ERVK-10P10266 1014 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 SLC2A3P11169 496 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 ELNP15502 786 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 HK2P52789 917 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 GEMP55040 296 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 AQP5P55064 265 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 YWHAHQ04917 246 aaPredicted RBP12.22□□□□□ -0.45
NUP54-202ENST00000502850 ZBTB17Q13105 803 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 MPP3Q13368 585 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 LPIN1Q14693 890 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 STRA8Q7Z7C7 330 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 KCNMB4Q86W47 210 aa12.22□□□□□ -0.45
NUP54-202ENST00000502850 DCP1BQ8IZD4 617 aaKnown RBP12.22□□□□□ -0.45
NUP54-202ENST00000502850 ENDOVQ8N8Q3 282 aaKnown RBP12.22□□□□□ -0.45
NUP54-202ENST00000502850 RDH11Q8TC12 318 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms