RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 XPO7Q9UIA9 1087 aaKnown RBP12.41□□□□□ -0.42
CNOT4-211ENST00000498534 E5RJQ4 531 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 WNT1P04628 370 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 GLI1P08151 1106 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 PDGFRAP16234 1089 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 ZNF18P17022 549 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 MZF1P28698 734 aaPredicted RBP12.4□□□□□ -0.42
CNOT4-211ENST00000498534 GNA15P30679 374 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 CCR1P32246 355 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 NUDT1P36639 197 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 USP8P40818 1118 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 STK19P49842 368 aaPredicted RBP12.4□□□□□ -0.42
CNOT4-211ENST00000498534 PLK1P53350 603 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 ADPRHP54922 357 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 MARSP56192 900 aaKnown RBP12.4□□□□□ -0.42
CNOT4-211ENST00000498534 STX17P56962 302 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 SNX16P57768 344 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 CAMK2BQ13554 666 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 STAT4Q14765 748 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 CREBRFQ8IUR6 639 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 CCAR2Q8N163 923 aaKnown RBP12.4□□□□□ -0.42
CNOT4-211ENST00000498534 OXR1Q8N573 874 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 EID2Q8N6I1 236 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 MFSD2AQ8NA29 543 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 SAP25Q8TEE9 199 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 OR8D1Q8WZ84 308 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 ERVMER34-1Q9H9K5 563 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 RYDENQ9NUL5 291 aaKnown RBP12.4□□□□□ -0.42
CNOT4-211ENST00000498534 DDIT4Q9NX09 232 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 SLC25A13Q9UJS0 675 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 CTNND2Q9UQB3 1225 aa12.4□□□□□ -0.42
CNOT4-211ENST00000498534 IGSF10Q6WRI0 2623 aa12.4□□□□□ -0.43
CNOT4-211ENST00000498534 SYNJ2BP-COX16A0A087WUM0 186 aa12.39□□□□□ -0.43
CNOT4-211ENST00000498534 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.39□□□□□ -0.43
CNOT4-211ENST00000498534 A0A1B0GVM2 712 aa12.39□□□□□ -0.43
CNOT4-211ENST00000498534 A0A1W2PR77 199 aa12.39□□□□□ -0.43
CNOT4-211ENST00000498534 TCAF2A6NFQ2 919 aa12.39□□□□□ -0.43
CNOT4-211ENST00000498534 EIF4E1BA6NMX2 242 aaKnown RBP12.39□□□□□ -0.43
CNOT4-211ENST00000498534 BIN1O00499 593 aa12.39□□□□□ -0.43
CNOT4-211ENST00000498534 SLC7A4O43246 635 aa12.39□□□□□ -0.43
CNOT4-211ENST00000498534 IGLV3-25P01717 112 aa12.39□□□□□ -0.43
CNOT4-211ENST00000498534 OVGP1Q12889 678 aa12.39□□□□□ -0.43
CNOT4-211ENST00000498534 PAK1Q13153 545 aa12.39□□□□□ -0.43
CNOT4-211ENST00000498534 ZNF177Q13360 481 aaPredicted RBP12.39□□□□□ -0.43
CNOT4-211ENST00000498534 MORC3Q14149 939 aa12.39□□□□□ -0.43
CNOT4-211ENST00000498534 TAF5Q15542 800 aa12.39□□□□□ -0.43
CNOT4-211ENST00000498534 C6orf118Q5T5N4 469 aa12.39□□□□□ -0.43
CNOT4-211ENST00000498534 NAPEPLDQ6IQ20 393 aa12.39□□□□□ -0.43
CNOT4-211ENST00000498534 IQCHQ86VS3 1027 aa12.39□□□□□ -0.43
CNOT4-211ENST00000498534 RPRD1AQ96P16 312 aaPredicted RBP12.39□□□□□ -0.43
CNOT4-211ENST00000498534 NOX5Q96PH1 765 aa12.39□□□□□ -0.43
CNOT4-211ENST00000498534 FEM1AQ9BSK4 669 aa12.39□□□□□ -0.43
CNOT4-211ENST00000498534 COX16Q9P0S2 106 aa12.39□□□□□ -0.43
CNOT4-211ENST00000498534 CYTH4Q9UIA0 394 aa12.39□□□□□ -0.43
CNOT4-211ENST00000498534 DMTF1Q9Y222 760 aa12.39□□□□□ -0.43
CNOT4-211ENST00000498534 PLXNA2O75051 1894 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 C2orf72A6NCS6 295 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 C1QTNF3-AMACRE9PGA6 284 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 WNT9AO14904 365 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 LATO43561 262 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 HSF2BPO75031 334 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 RFPL3O75679 317 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 BMP6P22004 513 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 RXRGP48443 463 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 NUMBP49757 651 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 NXPH1P58417 271 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 CCDC15Q0P6D6 951 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 DNAJC3Q13217 504 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 PDCLQ13371 301 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 EIF4EBP2Q13542 120 aaPredicted RBP12.38□□□□□ -0.43
CNOT4-211ENST00000498534 SHBQ15464 509 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 DLG2Q15700 870 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 ARHGAP44Q17R89 818 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 SOWAHCQ53LP3 525 aaPredicted RBP12.38□□□□□ -0.43
CNOT4-211ENST00000498534 FBXL22Q6P050 247 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 CIR1Q86X95 450 aaPredicted RBP12.38□□□□□ -0.43
CNOT4-211ENST00000498534 DEFB106AQ8N104 65 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 FRS2Q8WU20 508 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 PPP1R13BQ96KQ4 1090 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 PRMT1Q99873 361 aaKnown RBP12.38□□□□□ -0.43
CNOT4-211ENST00000498534 CRACR2AQ9BSW2 395 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 ASNSD1Q9NWL6 643 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 AK5Q9Y6K8 562 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 CELSR3Q9NYQ7 3312 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 ASXL3Q9C0F0 2248 aa12.38□□□□□ -0.43
CNOT4-211ENST00000498534 A0A087WV48 116 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 C10orf142B7Z368 130 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 PRAMEF26H0Y7S4 382 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 PLK4O00444 970 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 MCF2LO15068 1137 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 ALOX15BO15296 676 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 ATP9BO43861 1147 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 RTN2O75298 545 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 CLDN11O75508 207 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 VAV1P15498 845 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 EPHA8P29322 1005 aaPredicted RBP12.37□□□□□ -0.43
CNOT4-211ENST00000498534 MAT2AP31153 395 aaKnown RBP12.37□□□□□ -0.43
CNOT4-211ENST00000498534 DRD3P35462 400 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 KRT9P35527 623 aa12.37□□□□□ -0.43
CNOT4-211ENST00000498534 PITX1P78337 314 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms