RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 ZBTB16Q05516 673 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 SCAPQ12770 1279 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 SFSWAPQ12872 951 aaKnown RBP13.13□□□□□ -0.31
HSPG2-213ENST00000498495 CCDC6Q16204 474 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 C9orf64Q5T6V5 341 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 FAM72AQ5TYM5 149 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 ZNF776Q68DI1 518 aaPredicted RBP13.13□□□□□ -0.31
HSPG2-213ENST00000498495 FAM72DQ6L9T8 149 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 SARM1Q6SZW1 724 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 ARMCX6Q7L4S7 300 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 FAM72BQ86X60 149 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 PYROXD2Q8N2H3 581 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 PIGKQ92643 395 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 PTPRN2Q92932 1015 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 TBC1D31Q96DN5 1066 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 TOE1Q96GM8 510 aaKnown RBP13.13□□□□□ -0.31
HSPG2-213ENST00000498495 DNAJC7Q99615 494 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 NCAPGQ9BPX3 1015 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 THAP2Q9H0W7 228 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 RBSNQ9H1K0 784 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 RSPH9Q9H1X1 276 aaPredicted RBP13.13□□□□□ -0.31
HSPG2-213ENST00000498495 PARD6AQ9NPB6 346 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 CD93Q9NPY3 652 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 WSB2Q9NYS7 404 aaPredicted RBP13.13□□□□□ -0.31
HSPG2-213ENST00000498495 USP36Q9P275 1121 aaKnown RBP13.13□□□□□ -0.31
HSPG2-213ENST00000498495 PCSK1NQ9UHG2 260 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 DNAI1Q9UI46 699 aa13.13□□□□□ -0.31
HSPG2-213ENST00000498495 MYO15AQ9UKN7 3530 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 ZFHX2Q9C0A1 2572 aaPredicted RBP13.12□□□□□ -0.31
HSPG2-213ENST00000498495 AKR1B10O60218 316 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 PRPSAP2O60256 369 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 SNAP91O60641 907 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 EPHB2P29323 1055 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 PTGER3P43115 390 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 MAPKAPK2P49137 400 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 GALCP54803 685 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 GNA12Q03113 381 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 GFPT1Q06210 699 aaPredicted RBP13.12□□□□□ -0.31
HSPG2-213ENST00000498495 ZNF33AQ06730 810 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 ACAP1Q15027 740 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 DLG2Q15700 870 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 ARTNQ5T4W7 220 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 ERMARDQ5T6L9 678 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 MANEALQ5VSG8 457 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 LYSMD4Q5XG99 296 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 IL31Q6EBC2 164 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 RETSATQ6NUM9 610 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 CYP2U1Q7Z449 544 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 FAM124AQ86V42 546 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 MMAAQ8IVH4 418 aaKnown RBP13.12□□□□□ -0.31
HSPG2-213ENST00000498495 C12orf50Q8NA57 414 aaPredicted RBP13.12□□□□□ -0.31
HSPG2-213ENST00000498495 ATP11CQ8NB49 1132 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 OR7D4Q8NG98 312 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 GANCQ8TET4 914 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 PSMB7Q99436 277 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 EPAS1Q99814 870 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 GPR174Q9BXC1 333 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 TRIM7Q9C029 511 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 CATSPERBQ9H7T0 1116 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 ATP13A1Q9HD20 1204 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 VPS45Q9NRW7 570 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 ABHD10Q9NUJ1 306 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 TMEM248Q9NWD8 314 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 ZNF212Q9UDV6 495 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 SCML1Q9UN30 329 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 NCKAP1Q9Y2A7 1128 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 ABCA7Q8IZY2 2146 aa13.12□□□□□ -0.31
HSPG2-213ENST00000498495 THADAQ6YHU6 1953 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 SSU72P8A0A1W2PR75 194 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 PRR5-ARHGAP8B1AHC4 643 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 AKR1B15C9JRZ8 316 aaPredicted RBP13.11□□□□□ -0.31
HSPG2-213ENST00000498495 CBX4O00257 560 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 ATP9BO43861 1147 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 MFAP3LO75121 409 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 MIPP30301 263 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 ETFBP38117 255 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 DPP6P42658 865 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 ARHGAP8P85298 464 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 LMNB2Q03252 620 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 SLC20A2Q08357 652 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 MAPK8IP2Q13387 824 aaPredicted RBP13.11□□□□□ -0.31
HSPG2-213ENST00000498495 PIGHQ14442 188 aaPredicted RBP13.11□□□□□ -0.31
HSPG2-213ENST00000498495 SLC18A3Q16572 532 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 TTC31Q49AM3 519 aaPredicted RBP13.11□□□□□ -0.31
HSPG2-213ENST00000498495 PLA2G2CQ5R387 149 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 PRR23CQ6ZRP0 262 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 NLRP14Q86W24 1093 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 CNGA4Q8IV77 575 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 RGL4Q8IZJ4 473 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 STK40Q8N2I9 435 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 SH2D3CQ8N5H7 860 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 ARFGAP1Q8N6T3 406 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 DCAF4L2Q8NA75 395 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 FOXJ1Q92949 421 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 ZNF419Q96HQ0 510 aaPredicted RBP13.11□□□□□ -0.31
HSPG2-213ENST00000498495 CCDC42Q96M95 316 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 FAM129BQ96TA1 746 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 CHP1Q99653 195 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 NUP85Q9BW27 656 aa13.11□□□□□ -0.31
HSPG2-213ENST00000498495 DHX35Q9H5Z1 703 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms