RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 LMAN1LQ9HAT1 526 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 ATP13A1Q9HD20 1204 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 ELOVL2Q9NXB9 296 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 MYOFQ9NZM1 2061 aa12.2□□□□□ -0.46
CUX1-210ENST00000497815 KIAA1549LQ6ZVL6 1849 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 hCG_1818297A0A087WSY0 165 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 RASA4BC9J798 803 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 CBX4O00257 560 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 KCNK3O14649 394 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 APOL1O14791 398 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 RASA4O43374 803 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 MFSD11O43934 449 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 SNAP91O60641 907 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 RNF40O75150 1001 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 MAP3K6O95382 1288 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 ATP1A1P05023 1023 aaKnown RBP12.19□□□□□ -0.46
CUX1-210ENST00000497815 GLDCP23378 1020 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 TIE1P35590 1138 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 CETN2P41208 172 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 CTSOP43234 321 aaPredicted RBP12.19□□□□□ -0.46
CUX1-210ENST00000497815 TNFRSF4P43489 277 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 ADCY2Q08462 1091 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 SLC12A1Q13621 1099 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 CCINQ13939 588 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 DMC1Q14565 340 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 TFDP3Q5H9I0 405 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 DCAF12L1Q5VU92 463 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 LINGO4Q6UY18 593 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 LEKR1Q6ZMV7 388 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 KIAA0907Q7Z7F0 614 aaPredicted RBP12.19□□□□□ -0.46
CUX1-210ENST00000497815 UMODL1-AS1Q8N2C9 162 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 PJA1Q8NG27 643 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 ARHGEF2Q92974 986 aaKnown RBP12.19□□□□□ -0.46
CUX1-210ENST00000497815 ALG14Q96F25 216 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 HMCESQ96FZ2 354 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 NELL2Q99435 816 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 KLC2Q9H0B6 622 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 MAGEH1Q9H213 219 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 KCND1Q9NSA2 647 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 DONSONQ9NYP3 566 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 SIT1Q9Y3P8 196 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 JRKLQ9Y4A0 524 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 HEY1Q9Y5J3 304 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 OR51B4Q9Y5P0 310 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 VCANP13611 3396 aa12.19□□□□□ -0.46
CUX1-210ENST00000497815 MIA3Q5JRA6 1907 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 A0A0A0MRY4 1105 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 FAM86C2PA6NEL3 165 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 ZNF487B1APH4 448 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 CST8O60676 142 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 ATP5BP06576 529 aaKnown RBP12.18□□□□□ -0.46
CUX1-210ENST00000497815 DCNP07585 359 aaKnown RBP12.18□□□□□ -0.46
CUX1-210ENST00000497815 CHRNB1P11230 501 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 CXCR5P32302 372 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 SERPINB6P35237 376 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 ETFBP38117 255 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 WASP42768 502 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 STK19P49842 368 aaPredicted RBP12.18□□□□□ -0.46
CUX1-210ENST00000497815 PAPOLAP51003 745 aaKnown RBP12.18□□□□□ -0.46
CUX1-210ENST00000497815 NDST2P52849 883 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 PLK1P53350 603 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 YBEYP58557 167 aaPredicted RBP12.18□□□□□ -0.46
CUX1-210ENST00000497815 COPS2P61201 443 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 GBE1Q04446 702 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 TFDP2Q14188 446 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 LRRC32Q14392 662 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 EIF4HQ15056 248 aaKnown RBP12.18□□□□□ -0.46
CUX1-210ENST00000497815 PAFAH1B3Q15102 231 aaKnown RBP12.18□□□□□ -0.46
CUX1-210ENST00000497815 TAZQ16635 292 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 PARP15Q460N3 678 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 FNDC3BQ53EP0 1204 aaKnown RBP12.18□□□□□ -0.46
CUX1-210ENST00000497815 DGKKQ5KSL6 1271 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 SEL1L2Q5TEA6 688 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 CCDC181Q5TID7 509 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 EGFLAMQ63HQ2 1017 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 CWF19L1Q69YN2 538 aaKnown RBP12.18□□□□□ -0.46
CUX1-210ENST00000497815 SLC9A4Q6AI14 798 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 NPNTQ6UXI9 565 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 ZNF783Q6ZMS7 281 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 Q6ZS52 159 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 VSIG1Q86XK7 387 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 ARHGAP12Q8IWW6 846 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 CCDC105Q8IYK2 499 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 ZNF687Q8N1G0 1237 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 PLD5Q8N7P1 536 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 ZNF513Q8N8E2 541 aaPredicted RBP12.18□□□□□ -0.46
CUX1-210ENST00000497815 DCAF4L2Q8NA75 395 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 LRRN4Q8WUT4 740 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 UCMAQ8WVF2 138 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 TTC17Q96AE7 1141 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 PBXIP1Q96AQ6 731 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 HAUS1Q96CS2 278 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 ERLEC1Q96DZ1 483 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 RPL10LQ96L21 214 aaKnown RBP12.18□□□□□ -0.46
CUX1-210ENST00000497815 WDR24Q96S15 920 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 ACOX2Q99424 681 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 HERPUD2Q9BSE4 406 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 C2orf49Q9BVC5 232 aaPredicted RBP12.18□□□□□ -0.46
CUX1-210ENST00000497815 OSBPL8Q9BZF1 889 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 LRRC19Q9H756 370 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms