RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, human

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM4-205	ENST00000496896	INPP5D	Q92835	1189 aa		4.64	□□□□□ -1.67
TRIM4-205	ENST00000496896	PABPC3	Q9H361	631 aa	Known RBP	4.64	□□□□□ -1.67
TRIM4-205	ENST00000496896	SLC22A11	Q9NSA0	550 aa		4.64	□□□□□ -1.67
TRIM4-205	ENST00000496896	PLK2	Q9NYY3	685 aa		4.64	□□□□□ -1.67
TRIM4-205	ENST00000496896	DAPP1	Q9UN19	280 aa		4.64	□□□□□ -1.67
TRIM4-205	ENST00000496896	PCDHA7	Q9UN72	937 aa		4.64	□□□□□ -1.67
TRIM4-205	ENST00000496896	SLC4A4	Q9Y6R1	1079 aa		4.64	□□□□□ -1.67
TRIM4-205	ENST00000496896	PRX	Q9BXM0	1461 aa		4.63	□□□□□ -1.67
TRIM4-205	ENST00000496896	TRBV5-7	A0A0A0MS05	114 aa		4.63	□□□□□ -1.67
TRIM4-205	ENST00000496896	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.63	□□□□□ -1.67
TRIM4-205	ENST00000496896	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.63	□□□□□ -1.67
TRIM4-205	ENST00000496896		H0YGN5	161 aa		4.63	□□□□□ -1.67
TRIM4-205	ENST00000496896	TNFRSF13B	O14836	293 aa	Predicted RBP	4.63	□□□□□ -1.67
TRIM4-205	ENST00000496896	HLA-DQA2	P01906	255 aa		4.63	□□□□□ -1.67
TRIM4-205	ENST00000496896	SERPINB3	P29508	390 aa		4.63	□□□□□ -1.67
TRIM4-205	ENST00000496896	ICA1	Q05084	483 aa		4.63	□□□□□ -1.67
TRIM4-205	ENST00000496896	RNASEL	Q05823	741 aa	Known RBP	4.63	□□□□□ -1.67
TRIM4-205	ENST00000496896	PUM3	Q15397	648 aa	Known RBP	4.63	□□□□□ -1.67
TRIM4-205	ENST00000496896	ENTPD8	Q5MY95	495 aa		4.63	□□□□□ -1.67
TRIM4-205	ENST00000496896	TANGO2	Q6ICL3	276 aa		4.63	□□□□□ -1.67
TRIM4-205	ENST00000496896	TMEM200A	Q86VY9	491 aa		4.63	□□□□□ -1.67
TRIM4-205	ENST00000496896	GPSM1	Q86YR5	675 aa		4.63	□□□□□ -1.67
TRIM4-205	ENST00000496896	CCDC146	Q8IYE0	955 aa		4.63	□□□□□ -1.67
TRIM4-205	ENST00000496896	IP6K1	Q92551	441 aa		4.63	□□□□□ -1.67
TRIM4-205	ENST00000496896	SF3B5	Q9BWJ5	86 aa	Known RBP	4.63	□□□□□ -1.67
TRIM4-205	ENST00000496896	ARHGAP39	Q9C0H5	1083 aa		4.63	□□□□□ -1.67
TRIM4-205	ENST00000496896	NDUFAF4	Q9P032	175 aa		4.63	□□□□□ -1.67
TRIM4-205	ENST00000496896	TBC1D14	Q9P2M4	693 aa		4.63	□□□□□ -1.67
TRIM4-205	ENST00000496896	EME2	A4GXA9	379 aa	Predicted RBP	4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	TMEM247	A6NEH6	219 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	LACTBL1	A8MY62	500 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	HNRNPR	O43390	633 aa	Known RBP	4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	HEXIM1	O94992	359 aa	Known RBP	4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	PEPD	P12955	493 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	PNLIPRP1	P54315	467 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	ROR2	Q01974	943 aa	Known RBP	4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	EGR4	Q05215	589 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	DCTN1	Q14203	1278 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	WASHC2D	Q5SRD0	308 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	DGAT2L7P	Q6IED9	249 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	HMBOX1	Q6NT76	420 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	AAGAB	Q6PD74	315 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	KLHL17	Q6TDP4	642 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	CAMK1D	Q8IU85	385 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	IQCF1	Q8N6M8	205 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	KDM1B	Q8NB78	822 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	C7orf57	Q8NEG2	295 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	ADAMTS15	Q8TE58	950 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	ASB5	Q8WWX0	329 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	PIGS	Q96S52	555 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	RMDN3	Q96TC7	470 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	MEIS3	Q99687	375 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	ZPBP	Q9BS86	351 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	NTPCR	Q9BSD7	190 aa	Known RBP	4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	DDX23	Q9BUQ8	820 aa	Known RBP	4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	ISCU	Q9H1K1	167 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	PDE11A	Q9HCR9	933 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	HIF1AN	Q9NWT6	349 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	WWOX	Q9NZC7	414 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	LRP12	Q9Y561	859 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	PCDHA10	Q9Y5I2	948 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	PRDM2	Q13029	1718 aa		4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	RRBP1	Q9P2E9	1410 aa	Known RBP	4.62	□□□□□ -1.67
TRIM4-205	ENST00000496896	AGAP5	A6NIR3	686 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	ACKR2	O00590	384 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	PRPH2	P23942	346 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	SERPINA4	P29622	427 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	MCM2	P49736	904 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	ZXDB	P98169	803 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	ZBTB16	Q05516	673 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	UBE4A	Q14139	1066 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	SYCP2L	Q5T4T6	812 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	LIN54	Q6MZP7	749 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	SLC30A9	Q6PML9	568 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	FBXL14	Q8N1E6	418 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	GABPB2	Q8TAK5	448 aa	Predicted RBP	4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	STT3B	Q8TCJ2	826 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	MIB2	Q96AX9	1013 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	SLC39A13	Q96H72	371 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	ZNF479	Q96JC4	524 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	FRG2B	Q96QU4	278 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	FRMD8	Q9BZ67	464 aa	Predicted RBP	4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	ABHD16B	Q9H3Z7	469 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	ELAC1	Q9H777	363 aa	Known RBP	4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	ACTR5	Q9H9F9	607 aa	Predicted RBP	4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	PLAC1	Q9HBJ0	212 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	ZNF304	Q9HCX3	659 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	KRCC1	Q9NPI7	259 aa	Predicted RBP	4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	ARL15	Q9NXU5	204 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	DACT1	Q9NYF0	836 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	WNT16	Q9UBV4	365 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	FBXO4	Q9UKT5	387 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	BAG5	Q9UL15	447 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	RUSC2	Q8N2Y8	1516 aa		4.61	□□□□□ -1.67
TRIM4-205	ENST00000496896	GRM8	O00222	908 aa		4.6	□□□□□ -1.67
TRIM4-205	ENST00000496896	NGFR	P08138	427 aa		4.6	□□□□□ -1.67
TRIM4-205	ENST00000496896	HOXC6	P09630	235 aa		4.6	□□□□□ -1.67
TRIM4-205	ENST00000496896	MYZAP	P0CAP1	466 aa		4.6	□□□□□ -1.67
TRIM4-205	ENST00000496896	GYS1	P13807	737 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms