RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 RNF38Q9H0F5 515 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 ATP13A3Q9H7F0 1226 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 PCDH18Q9HCL0 1135 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 SAMD15Q9P1V8 674 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 RSPH14Q9UHP6 348 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 CYTH4Q9UIA0 394 aa8.83□□□□□ -1
U2AF1-212ENST00000496462 AAR2Q9Y312 384 aaKnown RBP8.83□□□□□ -1
U2AF1-212ENST00000496462 GFRA2O00451 464 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 TULP3O75386 442 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 PRAMEF12O95522 483 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 OLFM2O95897 454 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 CYP17A1P05093 508 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 TUBBP07437 444 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 RBP3P10745 1247 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 BCL2L1Q07817 233 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 ASTE1Q2TB18 679 aaPredicted RBP8.82□□□□□ -1
U2AF1-212ENST00000496462 STXBP5Q5T5C0 1151 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 PCDH20Q8N6Y1 951 aaKnown RBP8.82□□□□□ -1
U2AF1-212ENST00000496462 TERB1Q8NA31 727 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 ATRIPQ8WXE1 791 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 RMDN1Q96DB5 314 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 POLR1EQ9GZS1 481 aaKnown RBP8.82□□□□□ -1
U2AF1-212ENST00000496462 SLC2A4RGQ9NR83 387 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 ARGLU1Q9NWB6 273 aaPredicted RBP8.82□□□□□ -1
U2AF1-212ENST00000496462 ERVW-1Q9UQF0 538 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 KANSL1LA0AUZ9 987 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 FAM86C2PA6NEL3 165 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 LRRC72A6NJI9 287 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 KPNA3O00505 521 aaPredicted RBP8.82□□□□□ -1
U2AF1-212ENST00000496462 ENDOD1O94919 500 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 HOXB2P14652 356 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 NTSR1P30989 418 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 GJA4P35212 333 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 MMP13P45452 471 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 HDAC4P56524 1084 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 RPS24P62847 133 aaKnown RBP8.82□□□□□ -1
U2AF1-212ENST00000496462 ELF2Q15723 593 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 VITQ6UXI7 678 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 SYDE1Q6ZW31 735 aaPredicted RBP8.82□□□□□ -1
U2AF1-212ENST00000496462 DNAAF3Q8N9W5 541 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 ATL2Q8NHH9 583 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 TBC1D17Q9HA65 648 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 KLHL11Q9NVR0 708 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 MARK1Q9P0L2 795 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 SCML1Q9UN30 329 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 FAM169AQ9Y6X4 670 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 XIRP2A4UGR9 3374 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 SIP14410 1827 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 SMAPO00193 183 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 MAGEC1O60732 1142 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 ERLIN1O75477 346 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 CHRNA3P32297 505 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 CTNNA1P35221 906 aaKnown RBP8.82□□□□□ -1
U2AF1-212ENST00000496462 IL10RBQ08334 325 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 FCHO2Q0JRZ9 810 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 HLTFQ14527 1009 aaKnown RBP eCLIP8.82□□□□□ -1
U2AF1-212ENST00000496462 RALGPS1Q5JS13 557 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 ZNF776Q68DI1 518 aaPredicted RBP8.82□□□□□ -1
U2AF1-212ENST00000496462 FBXL19Q6PCT2 694 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 LINC00523Q86TU6 105 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 TSC1Q92574 1164 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 ZFYVE19Q96K21 471 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 RBM22Q9NW64 420 aaKnown RBP eCLIP8.82□□□□□ -1
U2AF1-212ENST00000496462 TMEM248Q9NWD8 314 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 MPP6Q9NZW5 540 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 PAK5Q9P286 719 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 AMACRQ9UHK6 382 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 ANAPC5Q9UJX4 755 aa8.82□□□□□ -1
U2AF1-212ENST00000496462 APOC4-APOC2K7ER74 178 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 POP4O95707 220 aaKnown RBP8.81□□□□□ -1
U2AF1-212ENST00000496462 APOC2P02655 101 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 CTHP32929 405 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 TIE1P35590 1138 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 FDFT1P37268 417 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 ADCY8P40145 1251 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 CXCL12P48061 93 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 ZP2Q05996 745 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 SGCGQ13326 291 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 XRCC4Q13426 336 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 PON2Q15165 354 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 C2orf27AQ580R0 203 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 SYCP2LQ5T4T6 812 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 ZC3H18Q86VM9 953 aaKnown RBP8.81□□□□□ -1
U2AF1-212ENST00000496462 GOLGA6L1Q8N7Z2 621 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 SLC39A13Q96H72 371 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 TARSL2A2RTX5 802 aaKnown RBP8.81□□□□□ -1
U2AF1-212ENST00000496462 ARSAP15289 507 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 GOT1P17174 413 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 OXTRP30559 389 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 HOXC13P31276 330 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 CCR2P41597 374 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 DGKEP52429 567 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 SEC13P55735 322 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 AP1S1P61966 158 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 EML3Q32P44 896 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 PLEKHG6Q3KR16 790 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 MAP9Q49MG5 647 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 PITRM1Q5JRX3 1037 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 C8orf74Q6P047 294 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 ADAT2Q7Z6V5 191 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms