RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 STX1BP61266 288 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 RHDQ02161 417 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 PPP3CAQ08209 521 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 CEP55Q53EZ4 464 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 ANKRD22Q5VYY1 191 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 C1orf186Q6ZWK4 172 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 GRAMD2AQ8IUY3 354 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 FAM178BQ8IXR5 827 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 TMC2Q8TDI7 906 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.24□□□□□ -0.93
HPS4-217ENST00000496385 SH3YL1Q96HL8 342 aaPredicted RBP9.24□□□□□ -0.93
HPS4-217ENST00000496385 FIZ1Q96SL8 496 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 SENP7Q9BQF6 1050 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 OR2B2Q9GZK3 357 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 SP140LQ9H930 580 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 DUS2Q9NX74 493 aaKnown RBP9.24□□□□□ -0.93
HPS4-217ENST00000496385 DSEQ9UL01 958 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 hCG_1818297A0A087WSY0 165 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 IGKV6D-41A0A0C4DH26 115 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 A0A0G2JLL6 359 aaPredicted RBP9.24□□□□□ -0.93
HPS4-217ENST00000496385 TRIM38O00635 465 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 DCXO43602 365 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 GUCY1B2O75343 617 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 TOM1L1O75674 476 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 IFNB1P01574 187 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 C1QAP02745 245 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 FGF3P11487 239 aaPredicted RBP9.24□□□□□ -0.93
HPS4-217ENST00000496385 BMP2P12643 396 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 NCAM1P13591 858 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 GLDCP23378 1020 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 SLC7A1P30825 629 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 ELK3P41970 407 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 NSFP46459 744 aaKnown RBP9.24□□□□□ -0.93
HPS4-217ENST00000496385 NUDT2P50583 147 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 TPTEP56180 551 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 AP3B2Q13367 1082 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 COG2Q14746 738 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 PUS10Q3MIT2 529 aaKnown RBP9.24□□□□□ -0.93
HPS4-217ENST00000496385 INTS11Q5TA45 600 aaKnown RBP9.24□□□□□ -0.93
HPS4-217ENST00000496385 EPGNQ6UW88 154 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 TMEM26Q6ZUK4 368 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 PRRT2Q7Z6L0 340 aaPredicted RBP9.24□□□□□ -0.93
HPS4-217ENST00000496385 AKAP14Q86UN6 197 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 GALNT13Q8IUC8 556 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 ESX1Q8N693 406 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 OR13F1Q8NGS4 319 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 LRRC39Q96DD0 335 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 MAGED4Q96JG8 741 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 FEM1CQ96JP0 617 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 TMEM121Q9BTD3 319 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 RAD21L1Q9H4I0 556 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 TUFT1Q9NNX1 390 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 XPNPEP1Q9NQW7 623 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 SACM1LQ9NTJ5 587 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 COPG2Q9UBF2 871 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 NXF1Q9UBU9 619 aaKnown RBP9.24□□□□□ -0.93
HPS4-217ENST00000496385 KCNH4Q9UQ05 1017 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 PCDHGA11Q9Y5H2 935 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 IVNS1ABPQ9Y6Y0 642 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 FRMPD2Q68DX3 1309 aaPredicted RBP9.24□□□□□ -0.93
HPS4-217ENST00000496385 KBTBD13C9JR72 458 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 PDHXO00330 501 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 CYB561D2O14569 222 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 TEX28O15482 410 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 GLRA3O75311 464 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 CRYZL1O95825 349 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 ABCB1P08183 1280 aaPredicted RBP9.24□□□□□ -0.93
HPS4-217ENST00000496385 ZNF182P17025 639 aaPredicted RBP9.24□□□□□ -0.93
HPS4-217ENST00000496385 MS4A2Q01362 244 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 OTUD4Q01804 1114 aaKnown RBP9.24□□□□□ -0.93
HPS4-217ENST00000496385 GNA12Q03113 381 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 INSCQ1MX18 579 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 KAZNQ674X7 775 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 PLEKHG7Q6ZR37 379 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 ZBTB49Q6ZSB9 765 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 MON1BQ7L1V2 547 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 IFNL1Q8IU54 200 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 CAMK1DQ8IU85 385 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 LACC1Q8IV20 430 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 NDUFAF2Q8N183 169 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 MYO1HQ8N1T3 1032 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 ZNF786Q8N393 782 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 PHTF2Q8N3S3 785 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 KAT5Q92993 513 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 NT5C1BQ96P26 610 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 LENG8Q96PV6 779 aaPredicted RBP9.24□□□□□ -0.93
HPS4-217ENST00000496385 WDR18Q9BV38 432 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 SLC4A5Q9BY07 1137 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 POLR1BQ9H9Y6 1135 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 EFCAB1Q9HAE3 211 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 MRGBPQ9NV56 204 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 FBXO28Q9NVF7 368 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 FKBP14Q9NWM8 211 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 FAM170AA1A519 330 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 MANSC4A6NHS7 340 aaPredicted RBP9.23□□□□□ -0.93
HPS4-217ENST00000496385 ZC3H11AO75152 810 aaKnown RBP eCLIP9.23□□□□□ -0.93
HPS4-217ENST00000496385 DEAF1O75398 565 aaPredicted RBP9.23□□□□□ -0.93
HPS4-217ENST00000496385 KRT1P04264 644 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 MSL3P1P0C860 447 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 SNHG28P0DPA3 235 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms