RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 SNX10Q9Y5X0 201 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 COL4A4P53420 1690 aaPredicted RBP11.31□□□□□ -0.6
CMSS1-208ENST00000496116 NUP205Q92621 2012 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 FGF10O15520 208 aaPredicted RBP11.3□□□□□ -0.6
CMSS1-208ENST00000496116 IRAK2O43187 625 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 TIMM44O43615 452 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 MGEA5O60502 916 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 GSRP00390 522 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 JCHAINP01591 159 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 PROCP04070 461 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 MPOP05164 745 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 ASGR1P07306 291 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 SERPINA6P08185 405 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 FGF3P11487 239 aaPredicted RBP11.3□□□□□ -0.6
CMSS1-208ENST00000496116 CCNCP24863 283 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 CSE1LP55060 971 aaKnown RBP11.3□□□□□ -0.6
CMSS1-208ENST00000496116 DSC3Q14574 896 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 PCLAFQ15004 111 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 ACCSLQ4AC99 568 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 SPATA2LQ8IUW3 424 aaPredicted RBP11.3□□□□□ -0.6
CMSS1-208ENST00000496116 DCLK2Q8N568 766 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 ATPAF2Q8N5M1 289 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 LZTR1Q8N653 840 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 PRR11Q96HE9 360 aaPredicted RBP11.3□□□□□ -0.6
CMSS1-208ENST00000496116 CELF6Q96J87 481 aaKnown RBP11.3□□□□□ -0.6
CMSS1-208ENST00000496116 TSGA13Q96PP4 275 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 PPP1R2P1Q96PQ5 205 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 NUDCD1Q96RS6 583 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 PKMYT1Q99640 499 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 ZNF395Q9H8N7 513 aaPredicted RBP11.3□□□□□ -0.6
CMSS1-208ENST00000496116 TMLHEQ9NVH6 421 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 ARMCX1Q9P291 453 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 SOX13Q9UN79 622 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 NOD1Q9Y239 953 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 DFFAO00273 331 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 DIAPH2O60879 1101 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 ADAMTS4O75173 837 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 PEX11AO75192 247 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 IGLV3-25P01717 112 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 MYCNP04198 464 aaPredicted RBP11.3□□□□□ -0.6
CMSS1-208ENST00000496116 TYMPP19971 482 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 CCR1P32246 355 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 GRIK1P39086 918 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 HADHAP40939 763 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 MAGEA12P43365 314 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 MPP3Q13368 585 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 SMAD1Q15797 465 aaKnown RBP11.3□□□□□ -0.6
CMSS1-208ENST00000496116 HSP90AA5PQ58FG0 334 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 CERCAMQ5T4B2 595 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 TEDDM1Q5T9Z0 273 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 FSTL4Q6MZW2 842 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 TMPRSS6Q8IU80 811 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 OR10T2Q8NGX3 314 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 NSMCE1Q8WV22 266 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 MFSD3Q96ES6 412 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 SUSD3Q96L08 255 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 ANKRD27Q96NW4 1050 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 SIK2Q9H0K1 926 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 DENND2DQ9H6A0 471 aaPredicted RBP11.3□□□□□ -0.6
CMSS1-208ENST00000496116 DCLRE1BQ9H816 532 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 YY1AP1Q9H869 796 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 C20orf96Q9NUD7 363 aaPredicted RBP11.3□□□□□ -0.6
CMSS1-208ENST00000496116 TAS2R1Q9NYW7 299 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 TMEM216Q9P0N5 145 aa11.3□□□□□ -0.6
CMSS1-208ENST00000496116 PTPRDP23468 1912 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 PATJQ8NI35 1801 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 CAPN14A8MX76 684 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 ANXA9O76027 345 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 RALBP11234 206 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 CCNG1P51959 295 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 SLC5A3P53794 718 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 YWHAHQ04917 246 aaPredicted RBP11.29□□□□□ -0.6
CMSS1-208ENST00000496116 EIF4EBP2Q13542 120 aaPredicted RBP11.29□□□□□ -0.6
CMSS1-208ENST00000496116 LPIN1Q14693 890 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 KCNA10Q16322 511 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 PPM1JQ5JR12 505 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 CD300LGQ6UXG3 332 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 RINLQ6ZS11 566 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 LRRTM3Q86VH5 581 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 C10orf107Q8IVU9 208 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 TEX9Q8N6V9 391 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 ENDOVQ8N8Q3 282 aaKnown RBP11.29□□□□□ -0.6
CMSS1-208ENST00000496116 SCAMP5Q8TAC9 235 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 DPF3Q92784 378 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 SMOC2Q9H3U7 446 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 CHRAC1Q9NRG0 131 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 TAGLN3Q9UI15 199 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 DNAJC16Q9Y2G8 782 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 A0A096LPK6 155 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 CA12O43570 354 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 CACNG3O60359 315 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 ENO1P06733 434 aaKnown RBP11.29□□□□□ -0.6
CMSS1-208ENST00000496116 TPBGLP0DKB5 382 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 CPA3P15088 417 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 YY1P25490 414 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 HOXC13P31276 330 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 FLT3LGP49771 235 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 ALDH18A1P54886 795 aaKnown RBP11.29□□□□□ -0.6
CMSS1-208ENST00000496116 HSF5Q4G112 596 aaPredicted RBP11.29□□□□□ -0.6
CMSS1-208ENST00000496116 PDPK2PQ6A1A2 396 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms