RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 ZNF830Q96NB3 372 aaPredicted RBP12.24□□□□□ -0.45
APTX-233ENST00000496030 PPP1R9BQ96SB3 815 aa12.24□□□□□ -0.45
APTX-233ENST00000496030 KCTD15Q96SI1 283 aaPredicted RBP12.24□□□□□ -0.45
APTX-233ENST00000496030 GOLPH3Q9H4A6 298 aa12.24□□□□□ -0.45
APTX-233ENST00000496030 LUC7LQ9NQ29 371 aaKnown RBP12.24□□□□□ -0.45
APTX-233ENST00000496030 ABCB8Q9NUT2 735 aa12.24□□□□□ -0.45
APTX-233ENST00000496030 C2orf42Q9NWW7 574 aa12.24□□□□□ -0.45
APTX-233ENST00000496030 LCMT1Q9UIC8 334 aa12.24□□□□□ -0.45
APTX-233ENST00000496030 STARD13Q9Y3M8 1113 aa12.24□□□□□ -0.45
APTX-233ENST00000496030 LOC400499M0QZD8 3231 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 TBC1D3BA6NDS4 549 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 CHURC1-FNTBB4DL54 471 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 IPO7O95373 1038 aaKnown RBP12.23□□□□□ -0.45
APTX-233ENST00000496030 APODP05090 189 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 RHOQP17081 205 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 DESP17661 470 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 COMTP21964 271 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 IL4RP24394 825 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 NOP2P46087 812 aaKnown RBP12.23□□□□□ -0.45
APTX-233ENST00000496030 FNTBP49356 437 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 PLK1P53350 603 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 CCDC6Q16204 474 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 DPYSL2Q16555 572 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 SMTNL2Q2TAL5 461 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 MAMSTRQ6ZN01 415 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 MFN1Q8IWA4 741 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 SYNPOQ8N3V7 929 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 LRRC57Q8N9N7 239 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 USP33Q8TEY7 942 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 TSC1Q92574 1164 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 ZYG11BQ9C0D3 744 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 DHX35Q9H5Z1 703 aaKnown RBP12.23□□□□□ -0.45
APTX-233ENST00000496030 ZWILCHQ9H900 591 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 NDFIP2Q9NV92 336 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 CWC15Q9P013 229 aaKnown RBP12.23□□□□□ -0.45
APTX-233ENST00000496030 GGA2Q9UJY4 613 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 HYOU1Q9Y4L1 999 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 ALG6Q9Y672 507 aa12.23□□□□□ -0.45
APTX-233ENST00000496030 FLNBO75369 2602 aaKnown RBP12.23□□□□□ -0.45
APTX-233ENST00000496030 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.22□□□□□ -0.45
APTX-233ENST00000496030 WASH4PA8MWX3 477 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 H0Y626 953 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 BUB1O43683 1085 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 RNF40O75150 1001 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 PABPC1P11940 636 aaKnown RBP12.22□□□□□ -0.45
APTX-233ENST00000496030 MZF1P28698 734 aaPredicted RBP12.22□□□□□ -0.45
APTX-233ENST00000496030 HCAR3P49019 387 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 LIMK1P53667 647 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 ZNF177Q13360 481 aaPredicted RBP12.22□□□□□ -0.45
APTX-233ENST00000496030 LRRC32Q14392 662 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 FUT11Q495W5 492 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 FBXO43Q4G163 708 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 AASDHQ4L235 1098 aaPredicted RBP12.22□□□□□ -0.45
APTX-233ENST00000496030 C11orf63Q6NUN7 778 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 ZNF662Q6ZS27 426 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 POLNQ7Z5Q5 900 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 ANKS1BQ7Z6G8 1248 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 TFAP2DQ7Z6R9 452 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 KIAA1328Q86T90 577 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 APCDD1Q8J025 514 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 FAM160A2Q8N612 972 aaPredicted RBP12.22□□□□□ -0.45
APTX-233ENST00000496030 KDF1Q8NAX2 398 aaPredicted RBP12.22□□□□□ -0.45
APTX-233ENST00000496030 SORCS1Q8WY21 1168 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 ANP32BQ92688 251 aaKnown RBP12.22□□□□□ -0.45
APTX-233ENST00000496030 EXOC4Q96A65 974 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 TTC17Q96AE7 1141 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 TBC1D31Q96DN5 1066 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 ACOX2Q99424 681 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 FEM1AQ9BSK4 669 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 TMEM121BQ9BXQ6 578 aaPredicted RBP12.22□□□□□ -0.45
APTX-233ENST00000496030 KLC2Q9H0B6 622 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 RETREG1Q9H6L5 497 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 NOL6Q9H6R4 1146 aaKnown RBP12.22□□□□□ -0.45
APTX-233ENST00000496030 PCDH18Q9HCL0 1135 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 ZDHHC4Q9NPG8 344 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 POLR3BQ9NW08 1133 aaPredicted RBP12.22□□□□□ -0.45
APTX-233ENST00000496030 TMEM248Q9NWD8 314 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 ELOVL2Q9NXB9 296 aa12.22□□□□□ -0.45
APTX-233ENST00000496030 KIAA1522Q9P206 1035 aaPredicted RBP12.22□□□□□ -0.45
APTX-233ENST00000496030 A0A0D9SEW6 157 aa12.21□□□□□ -0.45
APTX-233ENST00000496030 TYW5A2RUC4 315 aaKnown RBP12.21□□□□□ -0.45
APTX-233ENST00000496030 GRID2IPA4D2P6 1211 aa12.21□□□□□ -0.45
APTX-233ENST00000496030 CREB3O43889 395 aa12.21□□□□□ -0.45
APTX-233ENST00000496030 KCNK5O95279 499 aa12.21□□□□□ -0.45
APTX-233ENST00000496030 CD48P09326 243 aa12.21□□□□□ -0.45
APTX-233ENST00000496030 HNRNPLP14866 589 aaKnown RBP eCLIP12.21□□□□□ -0.45
APTX-233ENST00000496030 GOT1P17174 413 aa12.21□□□□□ -0.45
APTX-233ENST00000496030 SPINK2P20155 84 aa12.21□□□□□ -0.45
APTX-233ENST00000496030 EPHB2P29323 1055 aa12.21□□□□□ -0.45
APTX-233ENST00000496030 HTR7P34969 479 aa12.21□□□□□ -0.45
APTX-233ENST00000496030 CSKP41240 450 aa12.21□□□□□ -0.45
APTX-233ENST00000496030 SLC1A1P43005 524 aa12.21□□□□□ -0.45
APTX-233ENST00000496030 CCR3P51677 355 aa12.21□□□□□ -0.45
APTX-233ENST00000496030 SEC13P55735 322 aa12.21□□□□□ -0.45
APTX-233ENST00000496030 KIF5AQ12840 1032 aa12.21□□□□□ -0.45
APTX-233ENST00000496030 CDH18Q13634 790 aa12.21□□□□□ -0.45
APTX-233ENST00000496030 ENPP2Q13822 863 aa12.21□□□□□ -0.45
APTX-233ENST00000496030 DPYSQ14117 519 aa12.21□□□□□ -0.45
APTX-233ENST00000496030 PTPRNQ16849 979 aa12.21□□□□□ -0.45
APTX-233ENST00000496030 PLEKHG6Q3KR16 790 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms