RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 SNX30Q5VWJ9 437 aa10.52□□□□□ -0.73
HDAC3-214ENST00000495485 KLHDC10Q6PID8 442 aa10.52□□□□□ -0.73
HDAC3-214ENST00000495485 SYCE2Q6PIF2 218 aa10.52□□□□□ -0.73
HDAC3-214ENST00000495485 RSPO2Q6UXX9 243 aaPredicted RBP10.52□□□□□ -0.73
HDAC3-214ENST00000495485 LEKR1Q6ZMV7 388 aa10.52□□□□□ -0.73
HDAC3-214ENST00000495485 PID1Q7Z2X4 250 aa10.52□□□□□ -0.73
HDAC3-214ENST00000495485 CCDC13Q8IYE1 715 aa10.52□□□□□ -0.73
HDAC3-214ENST00000495485 PLCD3Q8N3E9 789 aa10.52□□□□□ -0.73
HDAC3-214ENST00000495485 OR2W6PQ8NHA6 318 aa10.52□□□□□ -0.73
HDAC3-214ENST00000495485 NSMCE1Q8WV22 266 aa10.52□□□□□ -0.73
HDAC3-214ENST00000495485 ARL8AQ96BM9 186 aa10.52□□□□□ -0.73
HDAC3-214ENST00000495485 P2RY11Q96G91 374 aa10.52□□□□□ -0.73
HDAC3-214ENST00000495485 ZNF512Q96ME7 567 aaPredicted RBP10.52□□□□□ -0.73
HDAC3-214ENST00000495485 ASB2Q96Q27 587 aa10.52□□□□□ -0.73
HDAC3-214ENST00000495485 CAPS2Q9BXY5 557 aa10.52□□□□□ -0.73
HDAC3-214ENST00000495485 S1PR5Q9H228 398 aa10.52□□□□□ -0.73
HDAC3-214ENST00000495485 NMUR1Q9HB89 426 aa10.52□□□□□ -0.73
HDAC3-214ENST00000495485 ETNK1Q9HBU6 452 aa10.52□□□□□ -0.73
HDAC3-214ENST00000495485 SENP1Q9P0U3 644 aa10.52□□□□□ -0.73
HDAC3-214ENST00000495485 KLHL8Q9P2G9 620 aaPredicted RBP10.52□□□□□ -0.73
HDAC3-214ENST00000495485 SLC24A2Q9UI40 661 aa10.52□□□□□ -0.73
HDAC3-214ENST00000495485 DNMT3LQ9UJW3 386 aa10.52□□□□□ -0.73
HDAC3-214ENST00000495485 MAGED2Q9UNF1 606 aaPredicted RBP10.52□□□□□ -0.73
HDAC3-214ENST00000495485 NOVA2Q9UNW9 492 aaKnown RBP10.52□□□□□ -0.73
HDAC3-214ENST00000495485 INSL5Q9Y5Q6 135 aa10.52□□□□□ -0.73
HDAC3-214ENST00000495485 IKBKGQ9Y6K9 419 aa10.52□□□□□ -0.73
HDAC3-214ENST00000495485 EXOC1LA0A1B0GW35 172 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 SLC12A8A0AV02 714 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 ARHGAP42A6NI28 874 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 RNF103O00237 685 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 TRDMT1O14717 391 aaKnown RBP10.51□□□□□ -0.73
HDAC3-214ENST00000495485 TP73O15350 636 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 LINC01565O15544 149 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 ADAM12O43184 909 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 MBTPS2O43462 519 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 CSPG5O95196 566 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 APRTP07741 180 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 ZDHHC11BP0C7U3 371 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 RHOQP17081 205 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 PFKLP17858 780 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 STX2P32856 288 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 GARSP41250 739 aaKnown RBP10.51□□□□□ -0.73
HDAC3-214ENST00000495485 SLC11A2P49281 568 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 HARS2P49590 506 aaKnown RBP10.51□□□□□ -0.73
HDAC3-214ENST00000495485 GPR15P49685 360 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 NDST2P52849 883 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 PPP2R2AP63151 447 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 SKOR1P84550 965 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 SEMA5AQ13591 1074 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 RASA2Q15283 850 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 SKIDA1Q1XH10 827 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 HECTD3Q5T447 861 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 SDHAF4Q5VUM1 108 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 KCTD16Q68DU8 428 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 PTCRAQ6ISU1 281 aaPredicted RBP10.51□□□□□ -0.73
HDAC3-214ENST00000495485 OTOP3Q7RTS5 596 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 PRUNE1Q86TP1 453 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 TDRPQ86YL5 185 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.51□□□□□ -0.73
HDAC3-214ENST00000495485 ATPAF2Q8N5M1 289 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 CCDC110Q8TBZ0 833 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 GIPC2Q8TF65 315 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 SMG7Q92540 1137 aaKnown RBP10.51□□□□□ -0.73
HDAC3-214ENST00000495485 PSMG2Q969U7 264 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 NXPE3Q969Y0 559 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 PLD4Q96BZ4 506 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 TRMT2BQ96GJ1 504 aaKnown RBP10.51□□□□□ -0.73
HDAC3-214ENST00000495485 SLC39A13Q96H72 371 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 C9orf72Q96LT7 481 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 TSGA13Q96PP4 275 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 PHF7Q9BWX1 381 aaPredicted RBP10.51□□□□□ -0.73
HDAC3-214ENST00000495485 ZYG11BQ9C0D3 744 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 EPB41L4BQ9H329 900 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 C10orf88Q9H8K7 445 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 PIDD1Q9HB75 910 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 SEPT10Q9P0V9 454 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 IGSF9Q9P2J2 1179 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 AAR2Q9Y312 384 aaKnown RBP10.51□□□□□ -0.73
HDAC3-214ENST00000495485 ACTL7BQ9Y614 415 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 NOTCH4Q99466 2003 aa10.51□□□□□ -0.73
HDAC3-214ENST00000495485 SRRM3A6NNA2 597 aaPredicted RBP10.5□□□□□ -0.73
HDAC3-214ENST00000495485 E9PAM4 449 aa10.5□□□□□ -0.73
HDAC3-214ENST00000495485 FAM72CH0Y354 149 aa10.5□□□□□ -0.73
HDAC3-214ENST00000495485 GOLGA8MH3BSY2 632 aa10.5□□□□□ -0.73
HDAC3-214ENST00000495485 TLR5O60602 858 aa10.5□□□□□ -0.73
HDAC3-214ENST00000495485 ANXA9O76027 345 aa10.5□□□□□ -0.73
HDAC3-214ENST00000495485 MOCS2O96007 188 aaPredicted RBP10.5□□□□□ -0.73
HDAC3-214ENST00000495485 MMP13P45452 471 aa10.5□□□□□ -0.73
HDAC3-214ENST00000495485 EPHA5P54756 1037 aa10.5□□□□□ -0.73
HDAC3-214ENST00000495485 GEMIN4P57678 1058 aaKnown RBP10.5□□□□□ -0.73
HDAC3-214ENST00000495485 MAGOHP61326 146 aaKnown RBP10.5□□□□□ -0.73
HDAC3-214ENST00000495485 TEX44Q53QW1 395 aa10.5□□□□□ -0.73
HDAC3-214ENST00000495485 RABGAP1LQ5R372 815 aa10.5□□□□□ -0.73
HDAC3-214ENST00000495485 RARS2Q5T160 578 aaKnown RBP10.5□□□□□ -0.73
HDAC3-214ENST00000495485 FAM72AQ5TYM5 149 aa10.5□□□□□ -0.73
HDAC3-214ENST00000495485 FAM72DQ6L9T8 149 aa10.5□□□□□ -0.73
HDAC3-214ENST00000495485 C3orf62Q6ZUJ4 267 aa10.5□□□□□ -0.73
HDAC3-214ENST00000495485 LINC00523Q86TU6 105 aa10.5□□□□□ -0.73
HDAC3-214ENST00000495485 FAM72BQ86X60 149 aa10.5□□□□□ -0.73
HDAC3-214ENST00000495485 RTL3Q8N8U3 475 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms