RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	EIF4H	Q15056	248 aa	Known RBP	13.87	□□□□□ -0.19
APTX-231	ENST00000494973	LLGL1	Q15334	1064 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	SIX1	Q15475	284 aa	Predicted RBP	13.87	□□□□□ -0.19
APTX-231	ENST00000494973	ARTN	Q5T4W7	220 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	TRIM68	Q6AZZ1	485 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	IL31	Q6EBC2	164 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	GRAMD4	Q6IC98	578 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	RETSAT	Q6NUM9	610 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	C4orf22	Q6V702	233 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	MAATS1	Q7Z4T9	603 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	ADAT2	Q7Z6V5	191 aa	Known RBP	13.87	□□□□□ -0.19
APTX-231	ENST00000494973	CIR1	Q86X95	450 aa	Predicted RBP	13.87	□□□□□ -0.19
APTX-231	ENST00000494973	ZNF354C	Q86Y25	554 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	NPW	Q8N729	165 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	PRELID2	Q8N945	189 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	CASKIN2	Q8WXE0	1202 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	ARHGEF2	Q92974	986 aa	Known RBP	13.87	□□□□□ -0.19
APTX-231	ENST00000494973	ASIC4	Q96FT7	647 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	ZNF599	Q96NL3	588 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	PPP1R2P1	Q96PQ5	205 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	AP1M1	Q9BXS5	423 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	PLA2G2F	Q9BZM2	168 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	KLC2	Q9H0B6	622 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	ATP13A1	Q9HD20	1204 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	HPS4	Q9NQG7	708 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	ETNK2	Q9NVF9	386 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	DNAJC17	Q9NVM6	304 aa	Known RBP	13.87	□□□□□ -0.19
APTX-231	ENST00000494973	DEC1	Q9P2X7	70 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	LIMD1	Q9UGP4	676 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	VPS28	Q9UK41	221 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	SLC27A6	Q9Y2P4	619 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	BCLAF3	A2AJT9	711 aa	Known RBP	13.86	□□□□□ -0.19
APTX-231	ENST00000494973	ARNTL	O00327	626 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	TIMM44	O43615	452 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	NEBL	O76041	1014 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	ASL	P04424	464 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	SRF	P11831	508 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	PABPC1	P11940	636 aa	Known RBP	13.86	□□□□□ -0.19
APTX-231	ENST00000494973	ARSA	P15289	507 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	IL10RB	Q08334	325 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	ADCY2	Q08462	1091 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	SERINC3	Q13530	473 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	TDG	Q13569	410 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	PRKD1	Q15139	912 aa	Predicted RBP	13.86	□□□□□ -0.19
APTX-231	ENST00000494973	RNF219	Q5W0B1	726 aa	Predicted RBP	13.86	□□□□□ -0.19
APTX-231	ENST00000494973	DARS2	Q6PI48	645 aa	Known RBP	13.86	□□□□□ -0.19
APTX-231	ENST00000494973	CCDC137	Q6PK04	289 aa	Known RBP	13.86	□□□□□ -0.19
APTX-231	ENST00000494973	RALGPS2	Q86X27	583 aa	Predicted RBP	13.86	□□□□□ -0.19
APTX-231	ENST00000494973	ARHGAP12	Q8IWW6	846 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	ETFBKMT	Q8IXQ9	262 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	CCDC13	Q8IYE1	715 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	CCDC105	Q8IYK2	499 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	SLC44A3	Q8N4M1	653 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	CCNY	Q8ND76	341 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	ATL2	Q8NHH9	583 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	RSAD2	Q8WXG1	361 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	SLCO2A1	Q92959	643 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	BHMT	Q93088	406 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	MYEOV	Q96EZ4	313 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	CELF6	Q96J87	481 aa	Known RBP	13.86	□□□□□ -0.19
APTX-231	ENST00000494973	ZFYVE19	Q96K21	471 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	CCDC114	Q96M63	670 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	HERPUD2	Q9BSE4	406 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	SLC39A8	Q9C0K1	460 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	SLC2A4RG	Q9NR83	387 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	PCYOX1	Q9UHG3	505 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	AMACR	Q9UHK6	382 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	IPO11	Q9UI26	975 aa	Known RBP	13.86	□□□□□ -0.19
APTX-231	ENST00000494973	GGA2	Q9UJY4	613 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	FBXO10	Q9UK96	956 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	ZNF148	Q9UQR1	794 aa		13.86	□□□□□ -0.19
APTX-231	ENST00000494973	CHD5	Q8TDI0	1954 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	TCRBV7S2A1N4T	A0A589	114 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	PDE2A	O00408	941 aa	Predicted RBP	13.85	□□□□□ -0.19
APTX-231	ENST00000494973	KDELR3	O43731	214 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	TULP3	O75386	442 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	SLU7	O95391	586 aa	Known RBP	13.85	□□□□□ -0.19
APTX-231	ENST00000494973	ECEL1	O95672	775 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	ATP5B	P06576	529 aa	Known RBP	13.85	□□□□□ -0.19
APTX-231	ENST00000494973	GJA4	P35212	333 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	COIL	P38432	576 aa	Predicted RBP	13.85	□□□□□ -0.19
APTX-231	ENST00000494973	HSPA9	P38646	679 aa	Known RBP	13.85	□□□□□ -0.19
APTX-231	ENST00000494973	CSK	P41240	450 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	PAPOLA	P51003	745 aa	Known RBP	13.85	□□□□□ -0.19
APTX-231	ENST00000494973	RENBP	P51606	427 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	TFF2	Q03403	129 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	ZP2	Q05996	745 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	SLC20A2	Q08357	652 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	AP1B1	Q10567	949 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	LMAN2	Q12907	356 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	OASL	Q15646	514 aa	Known RBP	13.85	□□□□□ -0.19
APTX-231	ENST00000494973	PLEKHG6	Q3KR16	790 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	GLE1	Q53GS7	698 aa	Known RBP	13.85	□□□□□ -0.19
APTX-231	ENST00000494973	NPNT	Q6UXI9	565 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	GSTA5	Q7RTV2	222 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	ZC3H18	Q86VM9	953 aa	Known RBP	13.85	□□□□□ -0.19
APTX-231	ENST00000494973	CCDC89	Q8N998	374 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	UCMA	Q8WVF2	138 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	C1orf54	Q8WWF1	131 aa		13.85	□□□□□ -0.19
APTX-231	ENST00000494973	HTR3C	Q8WXA8	447 aa		13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms