RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 UGT1A7Q9HAW7 530 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 UGT1A10Q9HAW8 530 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 UGT1A8Q9HAW9 530 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 TMEM248Q9NWD8 314 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 NKIRAS1Q9NYS0 192 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 HSFX1Q9UBD0 423 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 ZNF180Q9UJW8 692 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 SMG5Q9UPR3 1016 aaKnown RBP16.9■□□□□ 0.3
ATG4B-225ENST00000494465 ANAPC1Q9H1A4 1944 aa16.9■□□□□ 0.3
ATG4B-225ENST00000494465 ASMTLO95671 621 aa16.89■□□□□ 0.3
ATG4B-225ENST00000494465 RHOQP17081 205 aa16.89■□□□□ 0.3
ATG4B-225ENST00000494465 PAPOLAP51003 745 aaKnown RBP16.89■□□□□ 0.3
ATG4B-225ENST00000494465 CTAGE3PQ8IX95 158 aa16.89■□□□□ 0.3
ATG4B-225ENST00000494465 CMTR2Q8IYT2 770 aaKnown RBP16.89■□□□□ 0.3
ATG4B-225ENST00000494465 GDAP1Q8TB36 358 aa16.89■□□□□ 0.3
ATG4B-225ENST00000494465 TMEM169Q96HH4 297 aa16.89■□□□□ 0.3
ATG4B-225ENST00000494465 SGSM3Q96HU1 749 aa16.89■□□□□ 0.3
ATG4B-225ENST00000494465 IQANK1A0A1B0GTG1 560 aa16.89■□□□□ 0.29
ATG4B-225ENST00000494465 PGAM1P18669 254 aa16.89■□□□□ 0.29
ATG4B-225ENST00000494465 BTG3Q14201 252 aaPredicted RBP16.89■□□□□ 0.29
ATG4B-225ENST00000494465 RAP1GAP2Q684P5 730 aa16.89■□□□□ 0.29
ATG4B-225ENST00000494465 NADSYN1Q6IA69 706 aa16.89■□□□□ 0.29
ATG4B-225ENST00000494465 CASC4Q6P4E1 433 aa16.89■□□□□ 0.29
ATG4B-225ENST00000494465 TFAP2DQ7Z6R9 452 aa16.89■□□□□ 0.29
ATG4B-225ENST00000494465 DYDC1Q8WWB3 177 aa16.89■□□□□ 0.29
ATG4B-225ENST00000494465 MYEOVQ96EZ4 313 aa16.89■□□□□ 0.29
ATG4B-225ENST00000494465 SERAC1Q96JX3 654 aa16.89■□□□□ 0.29
ATG4B-225ENST00000494465 PRDM4Q9UKN5 801 aa16.89■□□□□ 0.29
ATG4B-225ENST00000494465 IKBKGQ9Y6K9 419 aa16.89■□□□□ 0.29
ATG4B-225ENST00000494465 ZNF840PA6NDX5 716 aa16.88■□□□□ 0.29
ATG4B-225ENST00000494465 DRGXA6NNA5 263 aa16.88■□□□□ 0.29
ATG4B-225ENST00000494465 EBAG9O00559 213 aa16.88■□□□□ 0.29
ATG4B-225ENST00000494465 PEX11BO96011 259 aa16.88■□□□□ 0.29
ATG4B-225ENST00000494465 ACRP10323 421 aa16.88■□□□□ 0.29
ATG4B-225ENST00000494465 KCNQ1P51787 676 aa16.88■□□□□ 0.29
ATG4B-225ENST00000494465 CRYMQ14894 314 aa16.88■□□□□ 0.29
ATG4B-225ENST00000494465 TPGS2Q68CL5 300 aa16.88■□□□□ 0.29
ATG4B-225ENST00000494465 LRRC49Q8IUZ0 686 aa16.88■□□□□ 0.29
ATG4B-225ENST00000494465 CCNJLQ8IV13 435 aa16.88■□□□□ 0.29
ATG4B-225ENST00000494465 BANPQ8N9N5 519 aa16.88■□□□□ 0.29
ATG4B-225ENST00000494465 OVCA2Q8WZ82 227 aa16.88■□□□□ 0.29
ATG4B-225ENST00000494465 NAT9Q9BTE0 207 aa16.88■□□□□ 0.29
ATG4B-225ENST00000494465 GRID1Q9ULK0 1009 aa16.88■□□□□ 0.29
ATG4B-225ENST00000494465 LAG3P18627 525 aa16.88■□□□□ 0.29
ATG4B-225ENST00000494465 NDST2P52849 883 aa16.88■□□□□ 0.29
ATG4B-225ENST00000494465 SLC1A5Q15758 541 aa16.88■□□□□ 0.29
ATG4B-225ENST00000494465 CPLX4Q7Z7G2 160 aa16.88■□□□□ 0.29
ATG4B-225ENST00000494465 TTC17Q96AE7 1141 aa16.88■□□□□ 0.29
ATG4B-225ENST00000494465 KLF6Q99612 283 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-225ENST00000494465 UBP1Q9NZI7 540 aa16.88■□□□□ 0.29
ATG4B-225ENST00000494465 HBS1LQ9Y450 684 aaKnown RBP16.88■□□□□ 0.29
ATG4B-225ENST00000494465 CHD5Q8TDI0 1954 aa16.88■□□□□ 0.29
ATG4B-225ENST00000494465 GOLGA6L7A0A1B0GV03 622 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 HMX2A2RU54 273 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 GOLGA8RI6L899 631 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 GJB5O95377 273 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 CA4P22748 312 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 NIPAL4Q0D2K0 466 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 TTC39BQ5VTQ0 682 aaPredicted RBP16.87■□□□□ 0.29
ATG4B-225ENST00000494465 TIGD7Q6NT04 549 aaPredicted RBP16.87■□□□□ 0.29
ATG4B-225ENST00000494465 DDX53Q86TM3 631 aaKnown RBP16.87■□□□□ 0.29
ATG4B-225ENST00000494465 SPATA22Q8NHS9 363 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 HMCESQ96FZ2 354 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 MYRFLQ96LU7 910 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 FCRL5Q96RD9 977 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 CYP4F11Q9HBI6 524 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 GLOD4Q9HC38 313 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 SPG21Q9NZD8 308 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 IPO11Q9UI26 975 aaKnown RBP16.87■□□□□ 0.29
ATG4B-225ENST00000494465 DNMT3LQ9UJW3 386 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 YIPF1Q9Y548 306 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 TCP11X1B4DZS4 312 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 EFCAB14O75071 495 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 HLA-DQB2P05538 268 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 RAG1P15918 1043 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 FOXN2P32314 431 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 ATP5C1P36542 298 aaKnown RBP16.87■□□□□ 0.29
ATG4B-225ENST00000494465 KPNA1P52294 538 aaPredicted RBP16.87■□□□□ 0.29
ATG4B-225ENST00000494465 SLC18A2Q05940 514 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 RAB33AQ14088 237 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 TAX1BP1Q86VP1 789 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 PDZD8Q8NEN9 1154 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 AUTS2Q8WXX7 1259 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 MAGEB18Q96M61 343 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 ZNF512Q96ME7 567 aaPredicted RBP16.87■□□□□ 0.29
ATG4B-225ENST00000494465 FCRL3Q96P31 734 aaPredicted RBP16.87■□□□□ 0.29
ATG4B-225ENST00000494465 CDK5RAP1Q96SZ6 601 aaKnown RBP16.87■□□□□ 0.29
ATG4B-225ENST00000494465 APOL2Q9BQE5 337 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 LRRC40Q9H9A6 602 aa16.87■□□□□ 0.29
ATG4B-225ENST00000494465 MT-ND3P03897 115 aa16.86■□□□□ 0.29
ATG4B-225ENST00000494465 KLHDC10Q6PID8 442 aa16.86■□□□□ 0.29
ATG4B-225ENST00000494465 PIGWQ7Z7B1 504 aa16.86■□□□□ 0.29
ATG4B-225ENST00000494465 CIR1Q86X95 450 aaPredicted RBP16.86■□□□□ 0.29
ATG4B-225ENST00000494465 FATE1Q969F0 183 aa16.86■□□□□ 0.29
ATG4B-225ENST00000494465 ALKBH8Q96BT7 664 aaKnown RBP16.86■□□□□ 0.29
ATG4B-225ENST00000494465 SEC16BQ96JE7 1060 aa16.86■□□□□ 0.29
ATG4B-225ENST00000494465 MYLKQ15746 1914 aa16.86■□□□□ 0.29
ATG4B-225ENST00000494465 TRIM49D1C9J1S8 452 aa16.86■□□□□ 0.29
ATG4B-225ENST00000494465 COCHO43405 550 aa16.86■□□□□ 0.29
ATG4B-225ENST00000494465 MT-CYBP00156 380 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms