RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 TTC31Q49AM3 519 aaPredicted RBP13.58□□□□□ -0.24
ERCC3-209ENST00000494464 WDR45BQ5MNZ6 344 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 SYCP2LQ5T4T6 812 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 RNF219Q5W0B1 726 aaPredicted RBP13.58□□□□□ -0.24
ERCC3-209ENST00000494464 ZNF776Q68DI1 518 aaPredicted RBP13.58□□□□□ -0.24
ERCC3-209ENST00000494464 ZNF662Q6ZS27 426 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 ZNF683Q8IZ20 524 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 APCDD1Q8J025 514 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 DEFB119Q8N690 84 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 MYRIPQ8NFW9 859 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 KIF18AQ8NI77 898 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 DESI2Q9BSY9 194 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 GPR174Q9BXC1 333 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 RSPH9Q9H1X1 276 aaPredicted RBP13.58□□□□□ -0.24
ERCC3-209ENST00000494464 CAPN10Q9HC96 672 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 TMEM9BQ9NQ34 198 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 ANLNQ9NQW6 1124 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 SUSD2Q9UGT4 822 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 MYO6Q9UM54 1294 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 SCML1Q9UN30 329 aa13.58□□□□□ -0.24
ERCC3-209ENST00000494464 IGLV3-10A0A075B6K4 115 aa13.57□□□□□ -0.24
ERCC3-209ENST00000494464 EDDM13A0A1B0GTR0 161 aa13.57□□□□□ -0.24
ERCC3-209ENST00000494464 CDX4O14627 284 aaPredicted RBP13.57□□□□□ -0.24
ERCC3-209ENST00000494464 SIN3BO75182 1162 aa13.57□□□□□ -0.24
ERCC3-209ENST00000494464 ENDOD1O94919 500 aa13.57□□□□□ -0.24
ERCC3-209ENST00000494464 NDUFA10O95299 355 aa13.57□□□□□ -0.24
ERCC3-209ENST00000494464 DNTTP04053 509 aa13.57□□□□□ -0.24
ERCC3-209ENST00000494464 SERPINF2P08697 491 aa13.57□□□□□ -0.24
ERCC3-209ENST00000494464 FERP16591 822 aa13.57□□□□□ -0.24
ERCC3-209ENST00000494464 MZF1P28698 734 aaPredicted RBP13.57□□□□□ -0.24
ERCC3-209ENST00000494464 CYLC1P35663 651 aaPredicted RBP13.57□□□□□ -0.24
ERCC3-209ENST00000494464 GGCXP38435 758 aa13.57□□□□□ -0.24
ERCC3-209ENST00000494464 CTSOP43234 321 aaPredicted RBP13.57□□□□□ -0.24
ERCC3-209ENST00000494464 NSFP46459 744 aaKnown RBP13.57□□□□□ -0.24
ERCC3-209ENST00000494464 CDH4P55283 916 aa13.57□□□□□ -0.24
ERCC3-209ENST00000494464 PTP4A2Q12974 167 aa13.57□□□□□ -0.24
ERCC3-209ENST00000494464 CLEC16AQ2KHT3 1053 aa13.57□□□□□ -0.24
ERCC3-209ENST00000494464 PHF13Q86YI8 300 aaPredicted RBP13.57□□□□□ -0.24
ERCC3-209ENST00000494464 DNASE2BQ8WZ79 361 aa13.57□□□□□ -0.24
ERCC3-209ENST00000494464 ALG14Q96F25 216 aa13.57□□□□□ -0.24
ERCC3-209ENST00000494464 C1orf74Q96LT6 269 aa13.57□□□□□ -0.24
ERCC3-209ENST00000494464 CFAP57Q96MR6 1250 aa13.57□□□□□ -0.24
ERCC3-209ENST00000494464 PCDHB18PQ96TA0 734 aa13.57□□□□□ -0.24
ERCC3-209ENST00000494464 C11orf70Q9BRQ4 267 aa13.57□□□□□ -0.24
ERCC3-209ENST00000494464 SIK2Q9H0K1 926 aa13.57□□□□□ -0.24
ERCC3-209ENST00000494464 SLC6A14Q9UN76 642 aa13.57□□□□□ -0.24
ERCC3-209ENST00000494464 TBC1D30Q9Y2I9 924 aa13.57□□□□□ -0.24
ERCC3-209ENST00000494464 EPN1Q9Y6I3 576 aaPredicted RBP13.57□□□□□ -0.24
ERCC3-209ENST00000494464 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.56□□□□□ -0.24
ERCC3-209ENST00000494464 FAM170AA1A519 330 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 C2CD4BA6NLJ0 364 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 LRRC53A6NM62 1247 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 C4orf47A7E2U8 309 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 MEI4A8MW99 385 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 EIF3CLB5ME19 914 aaKnown RBP13.56□□□□□ -0.24
ERCC3-209ENST00000494464 CFIP05156 583 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 CCDC172P0C7W6 258 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 ENGP17813 658 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 PTPN9P43378 593 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 KRT83P78385 493 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 ZNF177Q13360 481 aaPredicted RBP13.56□□□□□ -0.24
ERCC3-209ENST00000494464 PPM1JQ5JR12 505 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 C9orf64Q5T6V5 341 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 DAB2IPQ5VWQ8 1189 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 USP30Q70CQ3 517 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 MON1BQ7L1V2 547 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 C14orf80Q86SX3 495 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 EMC1Q8N766 993 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 C3orf20Q8ND61 904 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 OR52K2Q8NGK3 314 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 SLC30A5Q8TAD4 765 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 HAPLN3Q96S86 360 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 EIF3CQ99613 913 aaKnown RBP13.56□□□□□ -0.24
ERCC3-209ENST00000494464 CHP1Q99653 195 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 FEM1AQ9BSK4 669 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 OR51B4Q9Y5P0 310 aa13.56□□□□□ -0.24
ERCC3-209ENST00000494464 ADAMTS9Q9P2N4 1935 aa13.55□□□□□ -0.24
ERCC3-209ENST00000494464 SSU72P8A0A1W2PR75 194 aa13.55□□□□□ -0.24
ERCC3-209ENST00000494464 DRGXA6NNA5 263 aa13.55□□□□□ -0.24
ERCC3-209ENST00000494464 METTL12A8MUP2 240 aa13.55□□□□□ -0.24
ERCC3-209ENST00000494464 TTC34A8MYJ7 566 aa13.55□□□□□ -0.24
ERCC3-209ENST00000494464 RNASEH1O60930 286 aaKnown RBP13.55□□□□□ -0.24
ERCC3-209ENST00000494464 CALB1P05937 261 aa13.55□□□□□ -0.24
ERCC3-209ENST00000494464 GNSP15586 552 aa13.55□□□□□ -0.24
ERCC3-209ENST00000494464 SDC4P31431 198 aa13.55□□□□□ -0.24
ERCC3-209ENST00000494464 NNMTP40261 264 aa13.55□□□□□ -0.24
ERCC3-209ENST00000494464 STK19P49842 368 aaPredicted RBP13.55□□□□□ -0.24
ERCC3-209ENST00000494464 GFPT1Q06210 699 aaPredicted RBP13.55□□□□□ -0.24
ERCC3-209ENST00000494464 SFSWAPQ12872 951 aaKnown RBP13.55□□□□□ -0.24
ERCC3-209ENST00000494464 MAPK8IP2Q13387 824 aaPredicted RBP13.55□□□□□ -0.24
ERCC3-209ENST00000494464 ELAVL3Q14576 367 aaKnown RBP13.55□□□□□ -0.24
ERCC3-209ENST00000494464 LRRC31Q6UY01 552 aa13.55□□□□□ -0.24
ERCC3-209ENST00000494464 STRADAQ7RTN6 431 aa13.55□□□□□ -0.24
ERCC3-209ENST00000494464 SETD3Q86TU7 594 aaPredicted RBP13.55□□□□□ -0.24
ERCC3-209ENST00000494464 FAM131BQ86XD5 332 aa13.55□□□□□ -0.24
ERCC3-209ENST00000494464 RGL4Q8IZJ4 473 aa13.55□□□□□ -0.24
ERCC3-209ENST00000494464 ACRBPQ8NEB7 543 aa13.55□□□□□ -0.24
ERCC3-209ENST00000494464 AGPAT1Q99943 283 aa13.55□□□□□ -0.24
ERCC3-209ENST00000494464 SYT11Q9BT88 431 aa13.55□□□□□ -0.24
ERCC3-209ENST00000494464 BTBD1Q9H0C5 482 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms