RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 CELF6Q96J87 481 aaKnown RBP11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 UGT1A7Q9HAW7 530 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 UGT1A10Q9HAW8 530 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 UGT1A8Q9HAW9 530 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 OSER1Q9NX31 292 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 ZFATQ9P243 1243 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 HS3ST4Q9Y661 456 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 DFFAO00273 331 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 BIRC5O15392 142 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 SLC11A1P49279 550 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 PGFP49763 221 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 TUBP50607 506 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 TBX4P57082 545 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 CRADDP78560 199 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 BMPR2Q13873 1038 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 ANKS3Q6ZW76 656 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 RASSF3Q86WH2 238 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 ATP6V0D2Q8N8Y2 350 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 ZNF296Q8WUU4 475 aaPredicted RBP11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 C10orf82Q8WW14 230 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 GPR62Q9BZJ7 368 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 TLR8Q9NR97 1041 aaKnown RBP11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 GMIPQ9P107 970 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 TXNDC16Q9P2K2 825 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 MTMR11A4FU01 709 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 MAFKO60675 156 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 UBOX5O94941 541 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 RHOQP17081 205 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 NDST2P52849 883 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 RPL10AP62906 217 aaKnown RBP11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 TRIP4Q15650 581 aaPredicted RBP11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 MROH9Q5TGP6 573 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 NDUFAF2Q8N183 169 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 UMODL1-AS1Q8N2C9 162 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 ATP2A3Q93084 1043 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 FBXO32Q969P5 355 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 ISL2Q96A47 359 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 RMDN2Q96LZ7 410 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 TSSK1BQ9BXA7 367 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 NSMCE4AQ9NXX6 385 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 SOX13Q9UN79 622 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 TTC3P53804 2025 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 C2CD2LO14523 706 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 GLRA3O75311 464 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 CXCL10P02778 98 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 HAPLN1P10915 354 aaPredicted RBP11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 CPB1P15086 417 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 GEMP55040 296 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 INSCQ1MX18 579 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 ANKRD20A4Q4UJ75 823 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 ATG16L1Q676U5 607 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 CEP57Q86XR8 500 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 CNTD1Q8N815 330 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 ZNF669Q96BR6 464 aaPredicted RBP11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 SLC39A8Q9C0K1 460 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 GLOD4Q9HC38 313 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 TANC1Q9C0D5 1861 aa11.02□□□□□ -0.65
PHACTR4-204ENST00000493669 IGLV3-10A0A075B6K4 115 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 ATP5HO75947 161 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 GPR15P49685 360 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 KPNA1P52294 538 aaPredicted RBP11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 RING1Q06587 406 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 CDHR3Q6ZTQ4 885 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 ZNF683Q8IZ20 524 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 LRRC43Q8N309 656 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 FITM2Q8N6M3 262 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 ATAD1Q8NBU5 361 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 PTCD2Q8WV60 388 aaKnown RBP11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 BTN2A3PQ96KV6 586 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 CDK5RAP1Q96SZ6 601 aaKnown RBP11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 TRIM55Q9BYV6 548 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 PRDM5Q9NQX1 630 aaPredicted RBP11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 PCMTD2Q9NV79 361 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 TMEM248Q9NWD8 314 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 SIRPGQ9P1W8 387 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 ZCWPW2A0A1B0GU75 182 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 WDR91A4D1P6 747 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 GALTP07902 379 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 ITGA2BP08514 1039 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 NEFHP12036 1026 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 CSE1LP55060 971 aaKnown RBP11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 USP46P62068 366 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 CDK18Q07002 472 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 SF3A3Q12874 501 aaKnown RBP eCLIP11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 PIK3R6Q5UE93 754 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 C7orf26Q96N11 449 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 PGLYRP2Q96PD5 576 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 TTPALQ9BTX7 342 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 KIFC1Q9BW19 673 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 ZYG11BQ9C0D3 744 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 PAK6Q9NQU5 681 aaPredicted RBP11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 DCDC2Q9UHG0 476 aa11.01□□□□□ -0.65
PHACTR4-204ENST00000493669 RASSF9O75901 435 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 MOCS2O96007 188 aaPredicted RBP11□□□□□ -0.65
PHACTR4-204ENST00000493669 IGLV3-27P01718 113 aa11□□□□□ -0.65
PHACTR4-204ENST00000493669 SPRP35270 261 aaPredicted RBP11□□□□□ -0.65
PHACTR4-204ENST00000493669 HADHAP40939 763 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms