RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 FMR1NBQ8N0W7 255 aaPredicted RBP12.71□□□□□ -0.37
SAMM50-205ENST00000493621 CCAR2Q8N163 923 aaKnown RBP12.71□□□□□ -0.37
SAMM50-205ENST00000493621 ATP6V0D2Q8N8Y2 350 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 LMO3Q8TAP4 145 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 FRS2Q8WU20 508 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 OR8D1Q8WZ84 308 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 SMARCE1Q969G3 411 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 TRIM62Q9BVG3 475 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 KDM4CQ9H3R0 1056 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 SARDHQ9UL12 918 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 CLCA2Q9UQC9 943 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 ATP6V1DQ9Y5K8 247 aa12.71□□□□□ -0.37
SAMM50-205ENST00000493621 KCNU1A8MYU2 1149 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 E5RJQ4 531 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 PSMA7O14818 248 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 SLC7A4O43246 635 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 PLRG1O43660 514 aaKnown RBP12.7□□□□□ -0.38
SAMM50-205ENST00000493621 MAGEC1O60732 1142 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 SMC2O95347 1197 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 IGLV3-25P01717 112 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 KRT5P13647 590 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 PLK1P53350 603 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 INSM1Q01101 510 aaPredicted RBP12.7□□□□□ -0.38
SAMM50-205ENST00000493621 CNTN1Q12860 1018 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 PROX2Q3B8N5 592 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 FAM46CQ5VWP2 391 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 ISM2Q6H9L7 571 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 IQCHQ86VS3 1027 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 TRIM69Q86WT6 500 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 SNIP1Q8TAD8 396 aaKnown RBP12.7□□□□□ -0.38
SAMM50-205ENST00000493621 FGF11Q92914 225 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 FAM131CQ96AQ9 280 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 CEP63Q96MT8 703 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 KREMEN1Q96MU8 473 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 SLC4A5Q9BY07 1137 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 POPDC2Q9HBU9 364 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.7□□□□□ -0.38
SAMM50-205ENST00000493621 SLC12A6Q9UHW9 1150 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 SLC25A13Q9UJS0 675 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 DMTF1Q9Y222 760 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 CA5BQ9Y2D0 317 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 CFAP46Q8IYW2 2715 aa12.7□□□□□ -0.38
SAMM50-205ENST00000493621 SYNJ2BP-COX16A0A087WUM0 186 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 A0A1B0GVM2 712 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 TCAF2A6NFQ2 919 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 PRAMEF26H0Y7S4 382 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 TRIM38O00635 465 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 P4HA2O15460 535 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 SIGLEC6O43699 453 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 LETM1O95202 739 aaPredicted RBP12.69□□□□□ -0.38
SAMM50-205ENST00000493621 ZNF18P17022 549 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 ACP1P24666 158 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 ACTN2P35609 894 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 NUDT1P36639 197 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 YWHAZP63104 245 aaKnown RBP12.69□□□□□ -0.38
SAMM50-205ENST00000493621 GCNT1Q02742 428 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 CENPCQ03188 943 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 CCDC173Q0VFZ6 552 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 OVGP1Q12889 678 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 STIM1Q13586 685 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 SETMARQ53H47 684 aaPredicted RBP12.69□□□□□ -0.38
SAMM50-205ENST00000493621 RABGAP1LQ5R372 815 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 TTC39BQ5VTQ0 682 aaPredicted RBP12.69□□□□□ -0.38
SAMM50-205ENST00000493621 AGBL4Q5VU57 503 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 CXorf57Q6NSI4 855 aaKnown RBP12.69□□□□□ -0.38
SAMM50-205ENST00000493621 KDM7AQ6ZMT4 941 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 EHBP1Q8NDI1 1231 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 SPATA20Q8TB22 786 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 STK32AQ8WU08 396 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 RFFLQ8WZ73 363 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 RNF34Q969K3 372 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 KLHDC7BQ96G42 594 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 PRMT1Q99873 361 aaKnown RBP12.69□□□□□ -0.38
SAMM50-205ENST00000493621 MYOCQ99972 504 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 FAM204AQ9H8W3 233 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 COX16Q9P0S2 106 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 FLNBO75369 2602 aaKnown RBP12.69□□□□□ -0.38
SAMM50-205ENST00000493621 MGAQ8IWI9 3026 aa12.69□□□□□ -0.38
SAMM50-205ENST00000493621 ASH1LQ9NR48 2969 aaKnown RBP12.68□□□□□ -0.38
SAMM50-205ENST00000493621 C1QTNF3-AMACRE9PGA6 284 aa12.68□□□□□ -0.38
SAMM50-205ENST00000493621 MED7O43513 233 aa12.68□□□□□ -0.38
SAMM50-205ENST00000493621 ATP9BO43861 1147 aa12.68□□□□□ -0.38
SAMM50-205ENST00000493621 BNIP3LO60238 219 aa12.68□□□□□ -0.38
SAMM50-205ENST00000493621 MT-CO3P00414 261 aa12.68□□□□□ -0.38
SAMM50-205ENST00000493621 CD44P16070 742 aaKnown RBP12.68□□□□□ -0.38
SAMM50-205ENST00000493621 OXCT1P55809 520 aa12.68□□□□□ -0.38
SAMM50-205ENST00000493621 DAB2P98082 770 aa12.68□□□□□ -0.38
SAMM50-205ENST00000493621 E2F1Q01094 437 aa12.68□□□□□ -0.38
SAMM50-205ENST00000493621 ZNF211Q13398 564 aaPredicted RBP12.68□□□□□ -0.38
SAMM50-205ENST00000493621 EIF4EBP2Q13542 120 aaPredicted RBP12.68□□□□□ -0.38
SAMM50-205ENST00000493621 TAF5Q15542 800 aa12.68□□□□□ -0.38
SAMM50-205ENST00000493621 DLG2Q15700 870 aa12.68□□□□□ -0.38
SAMM50-205ENST00000493621 TBC1D25Q3MII6 688 aa12.68□□□□□ -0.38
SAMM50-205ENST00000493621 KLHL10Q6JEL2 608 aa12.68□□□□□ -0.38
SAMM50-205ENST00000493621 FBXL22Q6P050 247 aa12.68□□□□□ -0.38
SAMM50-205ENST00000493621 Q6ZVU0 165 aa12.68□□□□□ -0.38
SAMM50-205ENST00000493621 GPR155Q7Z3F1 870 aa12.68□□□□□ -0.38
SAMM50-205ENST00000493621 TMEM110Q86TL2 294 aa12.68□□□□□ -0.38
SAMM50-205ENST00000493621 CACTIN-AS1Q8N1I8 211 aa12.68□□□□□ -0.38
SAMM50-205ENST00000493621 SLC25A45Q8N413 288 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms