RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 A0A0D9SEW6 157 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 ILVBLA1L0T0 632 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 SOWAHDA6NJG2 315 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 PROB1E7EW31 1015 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 EEF2KO00418 725 aaKnown RBP13.11□□□□□ -0.31
CLIP2-209ENST00000493166 FGF10O15520 208 aaPredicted RBP13.11□□□□□ -0.31
CLIP2-209ENST00000493166 HRO43593 1189 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 IPO7O95373 1038 aaKnown RBP13.11□□□□□ -0.31
CLIP2-209ENST00000493166 NDUFV2P19404 249 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 FECHP22830 423 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 HOXD11P31277 338 aaPredicted RBP13.11□□□□□ -0.31
CLIP2-209ENST00000493166 MAGEA1P43355 309 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 STK19P49842 368 aaPredicted RBP13.11□□□□□ -0.31
CLIP2-209ENST00000493166 KRT83P78385 493 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 GNA12Q03113 381 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 SEMA3BQ13214 749 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 CA9Q16790 459 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 SMTNL2Q2TAL5 461 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 USP39Q53GS9 565 aaKnown RBP13.11□□□□□ -0.31
CLIP2-209ENST00000493166 PPP6R3Q5H9R7 873 aaPredicted RBP13.11□□□□□ -0.31
CLIP2-209ENST00000493166 KIAA1324Q6UXG2 1013 aaKnown RBP13.11□□□□□ -0.31
CLIP2-209ENST00000493166 PRR23BQ6ZRT6 265 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 CEP68Q76N32 757 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 RHOT2Q8IXI1 618 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 RTL3Q8N8U3 475 aaKnown RBP13.11□□□□□ -0.31
CLIP2-209ENST00000493166 KDM1BQ8NB78 822 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 OR7D4Q8NG98 312 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 SLC35G2Q8TBE7 412 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 RFFLQ8WZ73 363 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 NKD2Q969F2 451 aaPredicted RBP13.11□□□□□ -0.31
CLIP2-209ENST00000493166 MYO19Q96H55 970 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 KCTD15Q96SI1 283 aaPredicted RBP13.11□□□□□ -0.31
CLIP2-209ENST00000493166 PSMB7Q99436 277 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 BAG1Q99933 345 aaPredicted RBP13.11□□□□□ -0.31
CLIP2-209ENST00000493166 SPON2Q9BUD6 331 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 EPC1Q9H2F5 836 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 ZWILCHQ9H900 591 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 CD248Q9HCU0 757 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 OSGEPQ9NPF4 335 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 SUN2Q9UH99 717 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 DNAI1Q9UI46 699 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 RAB23Q9ULC3 237 aa13.11□□□□□ -0.31
CLIP2-209ENST00000493166 ABCA7Q8IZY2 2146 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 TMEM110-MUSTN1A8MSY1 372 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 SNAP91O60641 907 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 RAMP2O60895 175 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 PROSCO94903 275 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 LCA5LO95447 670 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 TCF4P15884 667 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 IL1R2P27930 398 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 ETFBP38117 255 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 SLC25A11Q02978 314 aaKnown RBP13.1□□□□□ -0.31
CLIP2-209ENST00000493166 CAMK2GQ13555 558 aaPredicted RBP13.1□□□□□ -0.31
CLIP2-209ENST00000493166 SIM2Q14190 667 aaPredicted RBP13.1□□□□□ -0.31
CLIP2-209ENST00000493166 MESDQ14696 234 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 HADHQ16836 314 aaKnown RBP13.1□□□□□ -0.31
CLIP2-209ENST00000493166 HNRNPA1L2Q32P51 320 aaKnown RBP13.1□□□□□ -0.31
CLIP2-209ENST00000493166 BOLA3Q53S33 107 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 KCNT1Q5JUK3 1230 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 IL31Q6EBC2 164 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 DCAF4L2Q8NA75 395 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 OR2T3Q8NH03 318 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 HSPH1Q92598 858 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 SPACA7Q96KW9 195 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 MRGPRX1Q96LB2 322 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 SLC6A17Q9H1V8 727 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 FBRSQ9HAH7 460 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 PRDM16Q9HAZ2 1276 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 ATP13A1Q9HD20 1204 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.1□□□□□ -0.31
CLIP2-209ENST00000493166 NDFIP2Q9NV92 336 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 DONSONQ9NYP3 566 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 VPS51Q9UID3 782 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 SLCO3A1Q9UIG8 710 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 INVSQ9Y283 1065 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 PCDHA13Q9Y5I0 950 aa13.1□□□□□ -0.31
CLIP2-209ENST00000493166 EPN1Q9Y6I3 576 aaPredicted RBP13.1□□□□□ -0.31
CLIP2-209ENST00000493166 ANKRD36A6QL64 1941 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 EDDM13A0A1B0GTR0 161 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 WASH4PA8MWX3 477 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 TTC34A8MYJ7 566 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 H3BRJ5 948 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 CBX4O00257 560 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 DAPK3O43293 454 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 MTA2O94776 668 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 NDUFA10O95299 355 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 LMNAP02545 664 aaKnown RBP13.09□□□□□ -0.31
CLIP2-209ENST00000493166 RARAP10276 462 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 GOT1P17174 413 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 GLDCP23378 1020 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 MAN1A1P33908 653 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 GJC1P36383 396 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 ZNF135P52742 658 aaPredicted RBP13.09□□□□□ -0.31
CLIP2-209ENST00000493166 COPAP53621 1224 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 BYSLQ13895 437 aaKnown RBP13.09□□□□□ -0.31
CLIP2-209ENST00000493166 POLD3Q15054 466 aaPredicted RBP13.09□□□□□ -0.31
CLIP2-209ENST00000493166 DPYSL2Q16555 572 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 ACCSLQ4AC99 568 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 TXNRD3NBQ6F5E7 133 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 RFX8Q6ZV50 586 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms