RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 DEFB103AP81534 67 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 BTG3Q14201 252 aaPredicted RBP14.36□□□□□ -0.11
PTPN7-216ENST00000492977 LGSNQ5TDP6 509 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 FOXR1Q6PIV2 292 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 DDX53Q86TM3 631 aaKnown RBP14.36□□□□□ -0.11
PTPN7-216ENST00000492977 PRPF39Q86UA1 669 aaKnown RBP14.36□□□□□ -0.11
PTPN7-216ENST00000492977 KLHDC8BQ8IXV7 354 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 ANKRD42Q8N9B4 389 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 MZB1Q8WU39 189 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 CKAP2Q8WWK9 683 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 FATE1Q969F0 183 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 IL12RB2Q99665 862 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 TMEM248Q9NWD8 314 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 MOCS1Q9NZB8 636 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 MPP6Q9NZW5 540 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 DNMT3LQ9UJW3 386 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 VANGL2Q9ULK5 521 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 MAGED2Q9UNF1 606 aaPredicted RBP14.36□□□□□ -0.11
PTPN7-216ENST00000492977 DOCK4Q8N1I0 1966 aa14.36□□□□□ -0.11
PTPN7-216ENST00000492977 A0A1W2PPM1 405 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 DRGXA6NNA5 263 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 ALDH1A2O94788 518 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 BAIAP3O94812 1187 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 MT-ND3P03897 115 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 RAG1P15918 1043 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 PGAM1P18669 254 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 NFKB1P19838 968 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 DRD4P21917 467 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 ITGB8P26012 769 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 MGAT1P26572 445 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 ATP5C1P36542 298 aaKnown RBP14.35□□□□□ -0.11
PTPN7-216ENST00000492977 SESN2P58004 480 aaPredicted RBP14.35□□□□□ -0.11
PTPN7-216ENST00000492977 TTC39BQ5VTQ0 682 aaPredicted RBP14.35□□□□□ -0.11
PTPN7-216ENST00000492977 CASC4Q6P4E1 433 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 KLHDC10Q6PID8 442 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 NECAB2Q7Z6G3 386 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 CPLX4Q7Z7G2 160 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 SPATS2Q86XZ4 545 aaKnown RBP14.35□□□□□ -0.11
PTPN7-216ENST00000492977 CTAGE3PQ8IX95 158 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 GPR65Q8IYL9 337 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 PPM1NQ8N819 430 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 MGARPQ8TDB4 240 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 DENND1AQ8TEH3 1009 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 ARNTL2Q8WYA1 636 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 TTC17Q96AE7 1141 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 CCSER2Q9H7U1 834 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 LRRC40Q9H9A6 602 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 CASS4Q9NQ75 786 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 NDFIP2Q9NV92 336 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 BFARQ9NZS9 450 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 GGA2Q9UJY4 613 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 MAFFQ9ULX9 164 aa14.35□□□□□ -0.11
PTPN7-216ENST00000492977 AAR2Q9Y312 384 aaKnown RBP14.35□□□□□ -0.11
PTPN7-216ENST00000492977 MRPL42Q9Y6G3 142 aaKnown RBP14.35□□□□□ -0.11
PTPN7-216ENST00000492977 TYROBPO43914 113 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 PIAS1O75925 651 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 FAM155BO75949 473 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 KRT37O76014 449 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 SEC24AO95486 1093 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 KRT4P19013 534 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 DNAJB2P25686 324 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 ALDH1A3P47895 512 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 IFNAR2P48551 515 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 NPY2RP49146 381 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 PAPOLAP51003 745 aaKnown RBP14.34□□□□□ -0.11
PTPN7-216ENST00000492977 IL9RQ01113 521 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 RAB33AQ14088 237 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 SPARCL1Q14515 664 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 LRRC14Q15048 493 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 ANO4Q32M45 955 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 NAPEPLDQ6IQ20 393 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 FBXL22Q6P050 247 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 FAM117BQ6P1L5 589 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 ZNF449Q6P9G9 518 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 ARHGAP36Q6ZRI8 547 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 LINC00523Q86TU6 105 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 CNTD1Q8N815 330 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 MYRFLQ96LU7 910 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 ZNF512Q96ME7 567 aaPredicted RBP14.34□□□□□ -0.11
PTPN7-216ENST00000492977 FCRL5Q96RD9 977 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 MLPHQ9BV36 600 aaPredicted RBP14.34□□□□□ -0.11
PTPN7-216ENST00000492977 FAM107BQ9H098 131 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 RETREG1Q9H6L5 497 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 SAMD15Q9P1V8 674 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 STK39Q9UEW8 545 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 MAGEB16A2A368 324 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 ZNF840PA6NDX5 716 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 CXorf49A8MYA2 514 aaPredicted RBP14.34□□□□□ -0.11
PTPN7-216ENST00000492977 HAX1O00165 279 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 SPAG7O75391 227 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 ANXA9O76027 345 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 ZWINTO95229 277 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 URODP06132 367 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 POLBP06746 335 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 HMBSP08397 361 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 SNRPAP09012 282 aaKnown RBP14.34□□□□□ -0.11
PTPN7-216ENST00000492977 HMGA1P17096 107 aaKnown RBP14.34□□□□□ -0.11
PTPN7-216ENST00000492977 PPM1AP35813 382 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 PPP3CCP48454 512 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 SERPINB9P50453 376 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms