RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 TTYH3Q9C0H2 523 aa7.29□□□□□ -1.24
TPR-208ENST00000492973 LMAN2LQ9H0V9 348 aa7.29□□□□□ -1.24
TPR-208ENST00000492973 ZBP1Q9H171 429 aa7.29□□□□□ -1.24
TPR-208ENST00000492973 OR10A5Q9H207 317 aa7.29□□□□□ -1.24
TPR-208ENST00000492973 PUF60Q9UHX1 559 aaKnown RBP7.29□□□□□ -1.24
TPR-208ENST00000492973 CAPN11Q9UMQ6 739 aa7.29□□□□□ -1.24
TPR-208ENST00000492973 COQ4Q9Y3A0 265 aa7.29□□□□□ -1.24
TPR-208ENST00000492973 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.29□□□□□ -1.242e-22■■■■■ 27.4
TPR-208ENST00000492973 MTCH2Q9Y6C9 303 aa7.29□□□□□ -1.24
TPR-208ENST00000492973 SF3B1O75533 1304 aaKnown RBP eCLIP7.28□□□□□ -1.24
TPR-208ENST00000492973 MYO7AQ13402 2215 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 FNDC1Q4ZHG4 1894 aaPredicted RBP7.28□□□□□ -1.24
TPR-208ENST00000492973 HIDE1A8MVS5 230 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 GOLGA6L6A8MZA4 724 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 M0QZQ0 153 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 EPHB6O15197 1021 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 STX10O60499 249 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 N4BP1O75113 896 aaKnown RBP7.28□□□□□ -1.24
TPR-208ENST00000492973 CSPG5O95196 566 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 HLA-DRAP01903 254 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 GYPCP04921 128 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 KRT19P08727 400 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 CTSAP10619 480 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 TKTP29401 623 aaKnown RBP7.28□□□□□ -1.24
TPR-208ENST00000492973 CASP14P31944 242 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 PNPLA4P41247 253 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 TAF6P49848 677 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 ADKP55263 362 aaKnown RBP7.28□□□□□ -1.24
TPR-208ENST00000492973 APBA1Q02410 837 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 GOLGA8FQ08AF8 430 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 GOLGA8DPQ0D2H9 430 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 ELAVL2Q12926 359 aaKnown RBP7.28□□□□□ -1.24
TPR-208ENST00000492973 TOP3AQ13472 1001 aaPredicted RBP7.28□□□□□ -1.24
TPR-208ENST00000492973 BIRC3Q13489 604 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 PTPN14Q15678 1187 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 EXOC3L4Q17RC7 722 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 USP41Q3LFD5 358 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 HS1BP3Q53T59 392 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 KLHDC7AQ5VTJ3 777 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 FAM171A1Q5VUB5 890 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 PLPP4Q5VZY2 271 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 KRT39Q6A163 491 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 ESRP1Q6NXG1 681 aaKnown RBP7.28□□□□□ -1.24
TPR-208ENST00000492973 DSTYKQ6XUX3 929 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 GBP6Q6ZN66 633 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 LIMS2Q7Z4I7 341 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 ADGRD2Q7Z7M1 963 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 USP37Q86T82 979 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 REXO1L1PQ8IX06 675 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 EFHBQ8N7U6 833 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 MRPL43Q8N983 215 aaKnown RBP7.28□□□□□ -1.24
TPR-208ENST00000492973 TC2NQ8N9U0 490 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 TAS1R2Q8TE23 839 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 MRPL38Q96DV4 380 aaKnown RBP7.28□□□□□ -1.24
TPR-208ENST00000492973 HPDLQ96IR7 371 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 SENP8Q96LD8 212 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 ZNF560Q96MR9 790 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 ZNF830Q96NB3 372 aaPredicted RBP7.28□□□□□ -1.24
TPR-208ENST00000492973 TCF25Q9BQ70 676 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 TTPALQ9BTX7 342 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 EDEM3Q9BZQ6 932 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 MMRN2Q9H8L6 949 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 BARX1Q9HBU1 254 aaPredicted RBP7.28□□□□□ -1.24
TPR-208ENST00000492973 APOBEC3GQ9HC16 384 aaKnown RBP7.28□□□□□ -1.24
TPR-208ENST00000492973 TMEM8AQ9HCN3 771 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 SIX2Q9NPC8 291 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 PLCB1Q9NQ66 1216 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 TLR9Q9NR96 1032 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 THG1LQ9NWX6 298 aaKnown RBP7.28□□□□□ -1.24
TPR-208ENST00000492973 GDAP2Q9NXN4 497 aa7.28□□□□□ -1.24
TPR-208ENST00000492973 SPTBN5Q9NRC6 3674 aaKnown RBP7.28□□□□□ -1.24
TPR-208ENST00000492973 KPNA7A9QM74 516 aa7.27□□□□□ -1.25
TPR-208ENST00000492973 AKR1B15C9JRZ8 316 aaPredicted RBP7.27□□□□□ -1.25
TPR-208ENST00000492973 CYB561D2O14569 222 aa7.27□□□□□ -1.25
TPR-208ENST00000492973 SYN3O14994 580 aa7.27□□□□□ -1.25
TPR-208ENST00000492973 ADAM12O43184 909 aa7.27□□□□□ -1.25
TPR-208ENST00000492973 TRAPPC3O43617 180 aa7.27□□□□□ -1.25
TPR-208ENST00000492973 PRICKLE3O43900 615 aaPredicted RBP7.27□□□□□ -1.25
TPR-208ENST00000492973 TBC1D4O60343 1298 aa7.27□□□□□ -1.25
TPR-208ENST00000492973 CXCL14O95715 111 aa7.27□□□□□ -1.25
TPR-208ENST00000492973 ASS1P00966 412 aaKnown RBP7.27□□□□□ -1.25
TPR-208ENST00000492973 PRLP01236 227 aa7.27□□□□□ -1.25
TPR-208ENST00000492973 PTMAP06454 111 aaKnown RBP7.27□□□□□ -1.25
TPR-208ENST00000492973 RPL17P18621 184 aaKnown RBP7.27□□□□□ -1.25
TPR-208ENST00000492973 TYMPP19971 482 aa7.27□□□□□ -1.25
TPR-208ENST00000492973 PAX3P23760 479 aa7.27□□□□□ -1.25
TPR-208ENST00000492973 CSF2RBP32927 897 aa7.27□□□□□ -1.25
TPR-208ENST00000492973 MASP1P48740 699 aa7.27□□□□□ -1.25
TPR-208ENST00000492973 GLUD2P49448 558 aa7.27□□□□□ -1.25
TPR-208ENST00000492973 MXI1P50539 228 aa7.27□□□□□ -1.25
TPR-208ENST00000492973 SCNN1BP51168 640 aa7.27□□□□□ -1.25
TPR-208ENST00000492973 GSDMDP57764 484 aa7.27□□□□□ -1.25
TPR-208ENST00000492973 TRPC3Q13507 836 aa7.27□□□□□ -1.25
TPR-208ENST00000492973 TRIM14Q14142 442 aa7.27□□□□□ -1.25
TPR-208ENST00000492973 PTPROQ16827 1216 aa7.27□□□□□ -1.25
TPR-208ENST00000492973 WDR72Q3MJ13 1102 aa7.27□□□□□ -1.25
TPR-208ENST00000492973 TCEAL5Q5H9L2 206 aa7.27□□□□□ -1.25
TPR-208ENST00000492973 SPOPLQ6IQ16 392 aa7.27□□□□□ -1.25
TPR-208ENST00000492973 BORAQ6PGQ7 559 aa7.27□□□□□ -1.25
TPR-208ENST00000492973 PRSS55Q6UWB4 352 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms