RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 CALB2P22676 271 aa12.71□□□□□ -0.37
HMGN1-220ENST00000492280 CHRNA4P43681 627 aa12.71□□□□□ -0.37
HMGN1-220ENST00000492280 PTDSS1P48651 473 aaKnown RBP12.71□□□□□ -0.37
HMGN1-220ENST00000492280 PPIDQ08752 370 aaKnown RBP12.71□□□□□ -0.37
HMGN1-220ENST00000492280 THOC5Q13769 683 aaKnown RBP12.71□□□□□ -0.37
HMGN1-220ENST00000492280 TAF11Q15544 211 aa12.71□□□□□ -0.37
HMGN1-220ENST00000492280 ANKRD20A4Q4UJ75 823 aa12.71□□□□□ -0.37
HMGN1-220ENST00000492280 TAF2Q6P1X5 1199 aa12.71□□□□□ -0.37
HMGN1-220ENST00000492280 DENND6AQ8IWF6 608 aa12.71□□□□□ -0.37
HMGN1-220ENST00000492280 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.71□□□□□ -0.37
HMGN1-220ENST00000492280 SORT1Q99523 831 aa12.71□□□□□ -0.37
HMGN1-220ENST00000492280 ADAM2Q99965 735 aa12.71□□□□□ -0.37
HMGN1-220ENST00000492280 FTHL17Q9BXU8 183 aa12.71□□□□□ -0.37
HMGN1-220ENST00000492280 IGSF9Q9P2J2 1179 aa12.71□□□□□ -0.37
HMGN1-220ENST00000492280 SLC39A10Q9ULF5 831 aa12.71□□□□□ -0.37
HMGN1-220ENST00000492280 ZNF236Q9UL36 1845 aa12.71□□□□□ -0.37
HMGN1-220ENST00000492280 GOLGA8QA0A0J9YX86 632 aa12.71□□□□□ -0.38
HMGN1-220ENST00000492280 GOLGA8OA6NCC3 632 aa12.71□□□□□ -0.38
HMGN1-220ENST00000492280 GOLGA8NF8WBI6 632 aa12.71□□□□□ -0.38
HMGN1-220ENST00000492280 TRAFD1O14545 582 aaPredicted RBP12.71□□□□□ -0.38
HMGN1-220ENST00000492280 PROCP04070 461 aa12.71□□□□□ -0.38
HMGN1-220ENST00000492280 MLNP12872 115 aa12.71□□□□□ -0.38
HMGN1-220ENST00000492280 HOXC8P31273 242 aa12.71□□□□□ -0.38
HMGN1-220ENST00000492280 GP5P40197 560 aa12.71□□□□□ -0.38
HMGN1-220ENST00000492280 LHX1P48742 406 aa12.71□□□□□ -0.38
HMGN1-220ENST00000492280 SLC25A3Q00325 362 aa12.71□□□□□ -0.38
HMGN1-220ENST00000492280 PCSK7Q16549 785 aa12.71□□□□□ -0.38
HMGN1-220ENST00000492280 RAB41Q5JT25 222 aa12.71□□□□□ -0.38
HMGN1-220ENST00000492280 CD300LGQ6UXG3 332 aa12.71□□□□□ -0.38
HMGN1-220ENST00000492280 KCNMB4Q86W47 210 aa12.71□□□□□ -0.38
HMGN1-220ENST00000492280 SMC1BQ8NDV3 1235 aa12.71□□□□□ -0.38
HMGN1-220ENST00000492280 CASP10Q92851 521 aa12.71□□□□□ -0.38
HMGN1-220ENST00000492280 THTPAQ9BU02 230 aa12.71□□□□□ -0.38
HMGN1-220ENST00000492280 BRD8Q9H0E9 1235 aa12.71□□□□□ -0.38
HMGN1-220ENST00000492280 CYP4F11Q9HBI6 524 aa12.71□□□□□ -0.38
HMGN1-220ENST00000492280 KCNK4Q9NYG8 393 aa12.71□□□□□ -0.38
HMGN1-220ENST00000492280 BFARQ9NZS9 450 aa12.71□□□□□ -0.38
HMGN1-220ENST00000492280 SLC2A6Q9UGQ3 507 aa12.71□□□□□ -0.38
HMGN1-220ENST00000492280 MYO16Q9Y6X6 1858 aa12.71□□□□□ -0.38
HMGN1-220ENST00000492280 NYNRINQ9P2P1 1898 aaKnown RBP12.7□□□□□ -0.38
HMGN1-220ENST00000492280 CCL22O00626 93 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 GLRA3O75311 464 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 PMPCBO75439 489 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 PDHA1P08559 390 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 ELNP15502 786 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 PGM1P36871 562 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 MPP1Q00013 466 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 CTBP1Q13363 440 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 C4orf22Q6V702 233 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 TFAP2DQ7Z6R9 452 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 ZNF781Q8N8C0 355 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 RBBP8Q99708 897 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 EPAS1Q99814 870 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 GBA3Q9H227 469 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 NMUR1Q9HB89 426 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 SLC38A7Q9NVC3 462 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 COPG2Q9UBF2 871 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 PRG3Q9Y2Y8 225 aaPredicted RBP12.7□□□□□ -0.38
HMGN1-220ENST00000492280 ANKRD12Q6UB98 2062 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 A0A096LPK6 155 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 LOC100653049A0A140TA62 436 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 CAPN14A8MX76 684 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.7□□□□□ -0.38
HMGN1-220ENST00000492280 E9PBE3 544 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 NEMP1O14524 444 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 KLHL41O60662 606 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 KRT34O76011 436 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 ASGR1P07306 291 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 CHRNGP07510 517 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 GNAZP19086 355 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 SLC5A3P53794 718 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 ARL13BQ3SXY8 428 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 RALGPS1Q5JS13 557 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 TTC9BQ8N6N2 239 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 NRG4Q8WWG1 115 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 CCDC124Q96CT7 223 aaKnown RBP12.7□□□□□ -0.38
HMGN1-220ENST00000492280 FERMT1Q9BQL6 677 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 MTG1Q9BT17 334 aaPredicted RBP12.7□□□□□ -0.38
HMGN1-220ENST00000492280 WWP1Q9H0M0 922 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 LRRC40Q9H9A6 602 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 EIF2B3Q9NR50 452 aaKnown RBP12.7□□□□□ -0.38
HMGN1-220ENST00000492280 THAP1Q9NVV9 213 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 MKS1Q9NXB0 559 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 ABI2Q9NYB9 513 aaPredicted RBP12.7□□□□□ -0.38
HMGN1-220ENST00000492280 CDH9Q9ULB4 789 aa12.7□□□□□ -0.38
HMGN1-220ENST00000492280 MTF2Q9Y483 593 aaPredicted RBP12.7□□□□□ -0.38
HMGN1-220ENST00000492280 C9IYK1 514 aa12.69□□□□□ -0.38
HMGN1-220ENST00000492280 AURKAO14965 403 aa12.69□□□□□ -0.38
HMGN1-220ENST00000492280 USP1O94782 785 aa12.69□□□□□ -0.38
HMGN1-220ENST00000492280 GSTA2P09210 222 aa12.69□□□□□ -0.38
HMGN1-220ENST00000492280 RALBP11234 206 aa12.69□□□□□ -0.38
HMGN1-220ENST00000492280 ARSAP15289 507 aa12.69□□□□□ -0.38
HMGN1-220ENST00000492280 NCF2P19878 526 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-220ENST00000492280 CCND3P30281 292 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-220ENST00000492280 GRIK1P39086 918 aa12.69□□□□□ -0.38
HMGN1-220ENST00000492280 GJA9P57773 515 aa12.69□□□□□ -0.38
HMGN1-220ENST00000492280 MAXP61244 160 aa12.69□□□□□ -0.38
HMGN1-220ENST00000492280 GRM3Q14832 879 aa12.69□□□□□ -0.38
HMGN1-220ENST00000492280 INTS6LQ5JSJ4 861 aaKnown RBP12.69□□□□□ -0.38
HMGN1-220ENST00000492280 RAPH1Q70E73 1250 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms