RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 LGMNQ99538 433 aa13.65□□□□□ -0.22
USF1-206ENST00000491629 SCN8AQ9UQD0 1980 aa13.65□□□□□ -0.22
USF1-206ENST00000491629 AHCTF1Q8WYP5 2266 aa13.64□□□□□ -0.23
USF1-206ENST00000491629 A0A1B0GVM2 712 aa13.64□□□□□ -0.23
USF1-206ENST00000491629 OPA1O60313 960 aa13.64□□□□□ -0.23
USF1-206ENST00000491629 KRT10P13645 584 aa13.64□□□□□ -0.23
USF1-206ENST00000491629 PDGFRAP16234 1089 aa13.64□□□□□ -0.23
USF1-206ENST00000491629 TACR2P21452 398 aa13.64□□□□□ -0.23
USF1-206ENST00000491629 BRD2P25440 801 aaKnown RBP13.64□□□□□ -0.23
USF1-206ENST00000491629 RPL34P49207 117 aaKnown RBP13.64□□□□□ -0.23
USF1-206ENST00000491629 NNTQ13423 1086 aa13.64□□□□□ -0.23
USF1-206ENST00000491629 EIF4EBP2Q13542 120 aaPredicted RBP13.64□□□□□ -0.23
USF1-206ENST00000491629 CNGA2Q16280 664 aa13.64□□□□□ -0.23
USF1-206ENST00000491629 SLC45A4Q5BKX6 768 aa13.64□□□□□ -0.23
USF1-206ENST00000491629 ZC3H12AQ5D1E8 599 aaKnown RBP13.64□□□□□ -0.23
USF1-206ENST00000491629 TMEM270Q6UE05 265 aa13.64□□□□□ -0.23
USF1-206ENST00000491629 PRPF39Q86UA1 669 aaKnown RBP13.64□□□□□ -0.23
USF1-206ENST00000491629 ZNF248Q8NDW4 579 aa13.64□□□□□ -0.23
USF1-206ENST00000491629 OR4C6Q8NH72 309 aa13.64□□□□□ -0.23
USF1-206ENST00000491629 SLC35C1Q96A29 364 aa13.64□□□□□ -0.23
USF1-206ENST00000491629 PRMT1Q99873 361 aaKnown RBP13.64□□□□□ -0.23
USF1-206ENST00000491629 MIS12Q9H081 205 aa13.64□□□□□ -0.23
USF1-206ENST00000491629 GOLPH3LQ9H4A5 285 aa13.64□□□□□ -0.23
USF1-206ENST00000491629 ASCL3Q9NQ33 180 aa13.64□□□□□ -0.23
USF1-206ENST00000491629 KIAA1257Q9ULG3 409 aa13.64□□□□□ -0.23
USF1-206ENST00000491629 PPM1HQ9ULR3 514 aa13.64□□□□□ -0.23
USF1-206ENST00000491629 M0QYV0 167 aa13.63□□□□□ -0.23
USF1-206ENST00000491629 DXOO77932 396 aaKnown RBP13.63□□□□□ -0.23
USF1-206ENST00000491629 IGLV3-25P01717 112 aa13.63□□□□□ -0.23
USF1-206ENST00000491629 PAEPP09466 180 aa13.63□□□□□ -0.23
USF1-206ENST00000491629 SYKP43405 635 aa13.63□□□□□ -0.23
USF1-206ENST00000491629 IRAK1P51617 712 aa13.63□□□□□ -0.23
USF1-206ENST00000491629 PMS1P54277 932 aaKnown RBP13.63□□□□□ -0.23
USF1-206ENST00000491629 PCBP4P57723 403 aaKnown RBP13.63□□□□□ -0.23
USF1-206ENST00000491629 E2F1Q01094 437 aa13.63□□□□□ -0.23
USF1-206ENST00000491629 OVGP1Q12889 678 aa13.63□□□□□ -0.23
USF1-206ENST00000491629 DCAF17Q5H9S7 520 aaPredicted RBP13.63□□□□□ -0.23
USF1-206ENST00000491629 TCERG1LQ5VWI1 586 aa13.63□□□□□ -0.23
USF1-206ENST00000491629 CXorf57Q6NSI4 855 aaKnown RBP13.63□□□□□ -0.23
USF1-206ENST00000491629 TMC6Q7Z403 805 aa13.63□□□□□ -0.23
USF1-206ENST00000491629 SLC22A18ASQ8N1D0 253 aa13.63□□□□□ -0.23
USF1-206ENST00000491629 SNRNP27Q8WVK2 155 aaKnown RBP13.63□□□□□ -0.23
USF1-206ENST00000491629 KLK6Q92876 244 aa13.63□□□□□ -0.23
USF1-206ENST00000491629 WBP1Q96G27 269 aa13.63□□□□□ -0.23
USF1-206ENST00000491629 HSFY1Q96LI6 401 aa13.63□□□□□ -0.23
USF1-206ENST00000491629 ZNF578Q96N58 590 aaPredicted RBP13.63□□□□□ -0.23
USF1-206ENST00000491629 SERPINB11Q96P15 392 aa13.63□□□□□ -0.23
USF1-206ENST00000491629 NOX5Q96PH1 765 aa13.63□□□□□ -0.23
USF1-206ENST00000491629 SPAG5Q96R06 1193 aa13.63□□□□□ -0.23
USF1-206ENST00000491629 MYOCQ99972 504 aa13.63□□□□□ -0.23
USF1-206ENST00000491629 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.63□□□□□ -0.23
USF1-206ENST00000491629 KDM4CQ9H3R0 1056 aa13.63□□□□□ -0.23
USF1-206ENST00000491629 CFAP45Q9UL16 551 aa13.63□□□□□ -0.23
USF1-206ENST00000491629 TPX2Q9ULW0 747 aaKnown RBP13.63□□□□□ -0.23
USF1-206ENST00000491629 DMTF1Q9Y222 760 aa13.63□□□□□ -0.23
USF1-206ENST00000491629 CEP83Q9Y592 693 aa13.63□□□□□ -0.23
USF1-206ENST00000491629 TYW5A2RUC4 315 aaKnown RBP13.62□□□□□ -0.23
USF1-206ENST00000491629 CETN3O15182 167 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 CASC3O15234 703 aaKnown RBP13.62□□□□□ -0.23
USF1-206ENST00000491629 FFAR2O15552 330 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 SLC7A4O43246 635 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 STX10O60499 249 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 USP12O75317 370 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 MOCS3O95396 460 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 CTSLP07711 333 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 THEGLP0DJG4 465 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 EPB41P11171 864 aaKnown RBP13.62□□□□□ -0.23
USF1-206ENST00000491629 CKMT1AP12532 417 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 PRLRP16471 622 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 GPD2P43304 727 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 PLK1P53350 603 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 TMPRSS3P57727 454 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 GABREP78334 506 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 RHDQ02161 417 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 KCNMA1Q12791 1236 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 STAT4Q14765 748 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 TAF1BQ53T94 588 aaPredicted RBP13.62□□□□□ -0.23
USF1-206ENST00000491629 PIP5KL1Q5T9C9 394 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 KRBA2Q6ZNG9 492 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 CHSY1Q86X52 802 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 CCAR2Q8N163 923 aaKnown RBP13.62□□□□□ -0.23
USF1-206ENST00000491629 OR13H1Q8NG92 308 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 LMO3Q8TAP4 145 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 KLHDC7BQ96G42 594 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 DDX50Q9BQ39 737 aaKnown RBP13.62□□□□□ -0.23
USF1-206ENST00000491629 FZD3Q9NPG1 666 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 OR51B4Q9Y5P0 310 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 DOPEY2Q9Y3R5 2298 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 CHD5Q8TDI0 1954 aa13.62□□□□□ -0.23
USF1-206ENST00000491629 LRRK1Q38SD2 2015 aa13.61□□□□□ -0.23
USF1-206ENST00000491629 PMS2P1A4D2B8 440 aa13.61□□□□□ -0.23
USF1-206ENST00000491629 PRAMEF26H0Y7S4 382 aa13.61□□□□□ -0.23
USF1-206ENST00000491629 SLC31A1O15431 190 aa13.61□□□□□ -0.23
USF1-206ENST00000491629 ATP9BO43861 1147 aa13.61□□□□□ -0.23
USF1-206ENST00000491629 CSO75390 466 aaKnown RBP13.61□□□□□ -0.23
USF1-206ENST00000491629 PIAS2O75928 621 aa13.61□□□□□ -0.23
USF1-206ENST00000491629 FBXO21O94952 628 aa13.61□□□□□ -0.23
USF1-206ENST00000491629 PRCPP42785 496 aa13.61□□□□□ -0.23
USF1-206ENST00000491629 LSSP48449 732 aa13.61□□□□□ -0.23
USF1-206ENST00000491629 VASPP50552 380 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms