RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 OSGEPQ9NPF4 335 aa18.51■□□□□ 0.55
HMGN1-219ENST00000491183 ADAMTS1Q9UHI8 967 aa18.51■□□□□ 0.55
HMGN1-219ENST00000491183 FAM47DPA6NHR8 397 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 GOLGA6L22H0YM25 854 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 ATP9BO43861 1147 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 RNASEH2AO75792 299 aaKnown RBP18.5■□□□□ 0.55
HMGN1-219ENST00000491183 ENDOD1O94919 500 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 ZNF18P17022 549 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 C5AR1P21730 350 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 MMP8P22894 467 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 PSMD8P48556 350 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 AFF3P51826 1226 aaKnown RBP18.5■□□□□ 0.55
HMGN1-219ENST00000491183 SIM1P81133 766 aaPredicted RBP18.5■□□□□ 0.55
HMGN1-219ENST00000491183 STX1AQ16623 288 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 HLA-BQ31612 363 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 RAB6CQ53S08 254 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 NCEH1Q6PIU2 408 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 ARCQ7LC44 396 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 PHLDB2Q86SQ0 1253 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 EMC1Q8N766 993 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 MSANTD4Q8NCY6 345 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 SLC30A5Q8TAD4 765 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 PCDHB18PQ96TA0 734 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 PSMB7Q99436 277 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 OMDQ99983 421 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 RAB6CQ9H0N0 254 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 EBF2Q9HAK2 575 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 FZD4Q9ULV1 537 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 PLXNA2O75051 1894 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 TMEM131Q92545 1883 aa18.5■□□□□ 0.55
HMGN1-219ENST00000491183 IGLV3-10A0A075B6K4 115 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 LGALS16A8MUM7 142 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 IL1BP01584 269 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 GOT1P17174 413 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 DRD3P35462 400 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 STAT1P42224 750 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 METAP1P53582 386 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 SFSWAPQ12872 951 aaKnown RBP18.49■□□□□ 0.55
HMGN1-219ENST00000491183 PTP4A2Q12974 167 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 ELAVL3Q14576 367 aaKnown RBP18.49■□□□□ 0.55
HMGN1-219ENST00000491183 DLG2Q15700 870 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 KIF19Q2TAC6 998 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 ACCSLQ4AC99 568 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 KCNT1Q5JUK3 1230 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 LAYNQ6UX15 382 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 METTL5Q9NRN9 209 aaKnown RBP18.49■□□□□ 0.55
HMGN1-219ENST00000491183 TMEM51Q9NW97 253 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 MPP6Q9NZW5 540 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 SLC25A13Q9UJS0 675 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 VPS28Q9UK41 221 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 SARDHQ9UL12 918 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 ANKRD6Q9Y2G4 727 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 FNDC3AQ9Y2H6 1198 aaKnown RBP18.49■□□□□ 0.55
HMGN1-219ENST00000491183 DAAM1Q9Y4D1 1078 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 PAXBP1Q9Y5B6 917 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 SNX11Q9Y5W9 270 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 DOCK4Q8N1I0 1966 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 KNL1Q8NG31 2342 aa18.49■□□□□ 0.55
HMGN1-219ENST00000491183 SNAP91O60641 907 aa18.48■□□□□ 0.55
HMGN1-219ENST00000491183 ADH1BP00325 375 aa18.48■□□□□ 0.55
HMGN1-219ENST00000491183 MT-CO1P00395 513 aa18.48■□□□□ 0.55
HMGN1-219ENST00000491183 RHOCP08134 193 aa18.48■□□□□ 0.55
HMGN1-219ENST00000491183 UNGP13051 313 aaPredicted RBP18.48■□□□□ 0.55
HMGN1-219ENST00000491183 RDXP35241 583 aaKnown RBP18.48■□□□□ 0.55
HMGN1-219ENST00000491183 GRIA4P48058 902 aa18.48■□□□□ 0.55
HMGN1-219ENST00000491183 UBXN1Q04323 297 aa18.48■□□□□ 0.55
HMGN1-219ENST00000491183 CCDC183Q5T5S1 534 aa18.48■□□□□ 0.55
HMGN1-219ENST00000491183 IL27RAQ6UWB1 636 aa18.48■□□□□ 0.55
HMGN1-219ENST00000491183 LRRC31Q6UY01 552 aa18.48■□□□□ 0.55
HMGN1-219ENST00000491183 FAM131BQ86XD5 332 aa18.48■□□□□ 0.55
HMGN1-219ENST00000491183 NAXDQ8IW45 347 aa18.48■□□□□ 0.55
HMGN1-219ENST00000491183 SH2D3CQ8N5H7 860 aa18.48■□□□□ 0.55
HMGN1-219ENST00000491183 NEK11Q8NG66 645 aa18.48■□□□□ 0.55
HMGN1-219ENST00000491183 OR2T34Q8NGX1 318 aa18.48■□□□□ 0.55
HMGN1-219ENST00000491183 JOSD2Q8TAC2 188 aa18.48■□□□□ 0.55
HMGN1-219ENST00000491183 SPAG5Q96R06 1193 aa18.48■□□□□ 0.55
HMGN1-219ENST00000491183 HAPLN3Q96S86 360 aa18.48■□□□□ 0.55
HMGN1-219ENST00000491183 MUC3BQ9H195 1237 aa18.48■□□□□ 0.55
HMGN1-219ENST00000491183 TM7SF3Q9NS93 570 aa18.48■□□□□ 0.55
HMGN1-219ENST00000491183 CHD8Q9HCK8 2581 aa18.47■□□□□ 0.55
HMGN1-219ENST00000491183 A0A0D9SEW6 157 aa18.47■□□□□ 0.55
HMGN1-219ENST00000491183 A0A1W2PPC4 97 aa18.47■□□□□ 0.55
HMGN1-219ENST00000491183 E9PAM4 449 aa18.47■□□□□ 0.55
HMGN1-219ENST00000491183 PLK4O00444 970 aa18.47■□□□□ 0.55
HMGN1-219ENST00000491183 KCNK3O14649 394 aa18.47■□□□□ 0.55
HMGN1-219ENST00000491183 CBFA2T3O75081 653 aa18.47■□□□□ 0.55
HMGN1-219ENST00000491183 GJB6O95452 261 aa18.47■□□□□ 0.55
HMGN1-219ENST00000491183 CER1O95813 267 aa18.47■□□□□ 0.55
HMGN1-219ENST00000491183 MBD3O95983 291 aa18.47■□□□□ 0.55
HMGN1-219ENST00000491183 ZNF883P0CG24 379 aa18.47■□□□□ 0.55
HMGN1-219ENST00000491183 SRCP12931 536 aa18.47■□□□□ 0.55
HMGN1-219ENST00000491183 CDK11BP21127 795 aaKnown RBP18.47■□□□□ 0.55
HMGN1-219ENST00000491183 ADPRHP54922 357 aa18.47■□□□□ 0.55
HMGN1-219ENST00000491183 ATP11AP98196 1134 aa18.47■□□□□ 0.55
HMGN1-219ENST00000491183 HNRNPDQ14103 355 aaKnown RBP18.47■□□□□ 0.55
HMGN1-219ENST00000491183 TEAD4Q15561 434 aa18.47■□□□□ 0.55
HMGN1-219ENST00000491183 TRIP6Q15654 476 aaKnown RBP18.47■□□□□ 0.55
HMGN1-219ENST00000491183 CCDC14Q49A88 953 aa18.47■□□□□ 0.55
HMGN1-219ENST00000491183 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.47■□□□□ 0.55
HMGN1-219ENST00000491183 TRIM72Q6ZMU5 477 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms