RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 KCNT1Q5JUK3 1230 aa20.29■□□□□ 0.84
SREBF1-216ENST00000490796 OLFML1Q6UWY5 402 aa20.29■□□□□ 0.84
SREBF1-216ENST00000490796 SLC26A9Q7LBE3 791 aa20.29■□□□□ 0.84
SREBF1-216ENST00000490796 PRPF39Q86UA1 669 aaKnown RBP20.29■□□□□ 0.84
SREBF1-216ENST00000490796 SLC47A2Q86VL8 602 aa20.29■□□□□ 0.84
SREBF1-216ENST00000490796 IRF2BP1Q8IU81 584 aa20.29■□□□□ 0.84
SREBF1-216ENST00000490796 ZDHHC17Q8IUH5 632 aa20.29■□□□□ 0.84
SREBF1-216ENST00000490796 TMEM35BQ8NCS4 154 aa20.29■□□□□ 0.84
SREBF1-216ENST00000490796 ELF4Q99607 663 aaPredicted RBP20.29■□□□□ 0.84
SREBF1-216ENST00000490796 ORAI3Q9BRQ5 295 aa20.29■□□□□ 0.84
SREBF1-216ENST00000490796 MUC3BQ9H195 1237 aa20.29■□□□□ 0.84
SREBF1-216ENST00000490796 NDST4Q9H3R1 872 aa20.29■□□□□ 0.84
SREBF1-216ENST00000490796 GDF3Q9NR23 364 aa20.29■□□□□ 0.84
SREBF1-216ENST00000490796 STAP1Q9ULZ2 295 aa20.29■□□□□ 0.84
SREBF1-216ENST00000490796 PAXBP1Q9Y5B6 917 aa20.29■□□□□ 0.84
SREBF1-216ENST00000490796 HS3ST4Q9Y661 456 aa20.29■□□□□ 0.84
SREBF1-216ENST00000490796 ACACAQ13085 2346 aa20.28■□□□□ 0.84
SREBF1-216ENST00000490796 C1QTNF3-AMACRE9PGA6 284 aa20.28■□□□□ 0.84
SREBF1-216ENST00000490796 ZZEF1O43149 2961 aa20.28■□□□□ 0.84
SREBF1-216ENST00000490796 BNIP3LO60238 219 aa20.28■□□□□ 0.84
SREBF1-216ENST00000490796 PAGE1O75459 146 aa20.28■□□□□ 0.84
SREBF1-216ENST00000490796 ITGAVP06756 1048 aa20.28■□□□□ 0.84
SREBF1-216ENST00000490796 VAV1P15498 845 aa20.28■□□□□ 0.84
SREBF1-216ENST00000490796 PTPN20Q4JDL3 420 aa20.28■□□□□ 0.84
SREBF1-216ENST00000490796 CXorf57Q6NSI4 855 aaKnown RBP20.28■□□□□ 0.84
SREBF1-216ENST00000490796 PROSER1Q86XN7 944 aa20.28■□□□□ 0.84
SREBF1-216ENST00000490796 GALNT15Q8N3T1 639 aa20.28■□□□□ 0.84
SREBF1-216ENST00000490796 FEM1AQ9BSK4 669 aa20.28■□□□□ 0.84
SREBF1-216ENST00000490796 WDCPQ9H6R7 721 aa20.28■□□□□ 0.84
SREBF1-216ENST00000490796 PLCB1Q9NQ66 1216 aa20.28■□□□□ 0.84
SREBF1-216ENST00000490796 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.28■□□□□ 0.845e-7■■■□□ 16.2
SREBF1-216ENST00000490796 FARP1Q9Y4F1 1045 aaPredicted RBP20.28■□□□□ 0.84
SREBF1-216ENST00000490796 A0A1B0GTQ1 180 aa20.27■□□□□ 0.84
SREBF1-216ENST00000490796 YKT6O15498 198 aa20.27■□□□□ 0.84
SREBF1-216ENST00000490796 PNMA6AP0CW24 399 aaPredicted RBP20.27■□□□□ 0.84
SREBF1-216ENST00000490796 CLCN1P35523 988 aa20.27■□□□□ 0.84
SREBF1-216ENST00000490796 GGCXP38435 758 aa20.27■□□□□ 0.84
SREBF1-216ENST00000490796 ARRB1P49407 418 aaPredicted RBP20.27■□□□□ 0.84
SREBF1-216ENST00000490796 SULT1E1P49888 294 aa20.27■□□□□ 0.84
SREBF1-216ENST00000490796 CDH4P55283 916 aa20.27■□□□□ 0.84
SREBF1-216ENST00000490796 KRT83P78385 493 aa20.27■□□□□ 0.84
SREBF1-216ENST00000490796 DLG2Q15700 870 aa20.27■□□□□ 0.84
SREBF1-216ENST00000490796 VWA3BQ502W6 1294 aa20.27■□□□□ 0.84
SREBF1-216ENST00000490796 PRAMEF14Q5SWL7 426 aa20.27■□□□□ 0.84
SREBF1-216ENST00000490796 LRRC31Q6UY01 552 aa20.27■□□□□ 0.84
SREBF1-216ENST00000490796 TMPRSS7Q7RTY8 843 aa20.27■□□□□ 0.84
SREBF1-216ENST00000490796 MSANTD4Q8NCY6 345 aa20.27■□□□□ 0.84
SREBF1-216ENST00000490796 ZNF397Q8NF99 534 aaPredicted RBP20.27■□□□□ 0.84
SREBF1-216ENST00000490796 CCDC114Q96M63 670 aa20.27■□□□□ 0.84
SREBF1-216ENST00000490796 SIX2Q9NPC8 291 aa20.27■□□□□ 0.84
SREBF1-216ENST00000490796 CHMP5Q9NZZ3 219 aa20.27■□□□□ 0.84
SREBF1-216ENST00000490796 SLC7A4O43246 635 aa20.26■□□□□ 0.83
SREBF1-216ENST00000490796 ATP9BO43861 1147 aa20.26■□□□□ 0.83
SREBF1-216ENST00000490796 F9P00740 461 aa20.26■□□□□ 0.83
SREBF1-216ENST00000490796 RHOCP08134 193 aa20.26■□□□□ 0.83
SREBF1-216ENST00000490796 VASPP50552 380 aaPredicted RBP20.26■□□□□ 0.83
SREBF1-216ENST00000490796 KCNJ12Q14500 433 aa20.26■□□□□ 0.83
SREBF1-216ENST00000490796 HSP90AA4PQ58FG1 418 aa20.26■□□□□ 0.83
SREBF1-216ENST00000490796 BRMS1LQ5PSV4 323 aa20.26■□□□□ 0.83
SREBF1-216ENST00000490796 GATAD2AQ86YP4 633 aa20.26■□□□□ 0.83
SREBF1-216ENST00000490796 FAM71AQ8IYT1 594 aa20.26■□□□□ 0.83
SREBF1-216ENST00000490796 FRS2Q8WU20 508 aa20.26■□□□□ 0.83
SREBF1-216ENST00000490796 TUBGCP2Q9BSJ2 902 aa20.26■□□□□ 0.83
SREBF1-216ENST00000490796 TKTL2Q9H0I9 626 aa20.26■□□□□ 0.83
SREBF1-216ENST00000490796 KDM4CQ9H3R0 1056 aa20.26■□□□□ 0.83
SREBF1-216ENST00000490796 CLSTN2Q9H4D0 955 aa20.26■□□□□ 0.83
SREBF1-216ENST00000490796 EBF2Q9HAK2 575 aa20.26■□□□□ 0.83
SREBF1-216ENST00000490796 TMEM51Q9NW97 253 aa20.26■□□□□ 0.83
SREBF1-216ENST00000490796 TOR4AQ9NXH8 423 aa20.26■□□□□ 0.83
SREBF1-216ENST00000490796 AJAP1Q9UKB5 411 aaPredicted RBP20.26■□□□□ 0.83
SREBF1-216ENST00000490796 LHX6Q9UPM6 363 aa20.26■□□□□ 0.83
SREBF1-216ENST00000490796 TMEM131Q92545 1883 aa20.26■□□□□ 0.83
SREBF1-216ENST00000490796 ALOX15BO15296 676 aa20.25■□□□□ 0.83
SREBF1-216ENST00000490796 MAGEC1O60732 1142 aa20.25■□□□□ 0.83
SREBF1-216ENST00000490796 RTN2O75298 545 aa20.25■□□□□ 0.83
SREBF1-216ENST00000490796 WNT1P04628 370 aa20.25■□□□□ 0.83
SREBF1-216ENST00000490796 NUDT1P36639 197 aa20.25■□□□□ 0.83
SREBF1-216ENST00000490796 DEUP1Q05D60 604 aa20.25■□□□□ 0.83
SREBF1-216ENST00000490796 CCDC15Q0P6D6 951 aa20.25■□□□□ 0.83
SREBF1-216ENST00000490796 DRAP1Q14919 205 aaPredicted RBP20.25■□□□□ 0.83
SREBF1-216ENST00000490796 POM121L1PQ3SYA9 428 aa20.25■□□□□ 0.83
SREBF1-216ENST00000490796 FAM102AQ5T9C2 384 aaPredicted RBP20.25■□□□□ 0.83
SREBF1-216ENST00000490796 NAPEPLDQ6IQ20 393 aa20.25■□□□□ 0.83
SREBF1-216ENST00000490796 Q6ZVU0 165 aa20.25■□□□□ 0.83
SREBF1-216ENST00000490796 C14orf80Q86SX3 495 aa20.25■□□□□ 0.83
SREBF1-216ENST00000490796 ERICH1Q86X53 443 aa20.25■□□□□ 0.83
SREBF1-216ENST00000490796 OXR1Q8N573 874 aa20.25■□□□□ 0.83
SREBF1-216ENST00000490796 ATP11CQ8NB49 1132 aa20.25■□□□□ 0.83
SREBF1-216ENST00000490796 PIP4K2CQ8TBX8 421 aa20.25■□□□□ 0.83
SREBF1-216ENST00000490796 C18orf8Q96DM3 657 aa20.25■□□□□ 0.83
SREBF1-216ENST00000490796 C2orf49Q9BVC5 232 aaPredicted RBP20.25■□□□□ 0.83
SREBF1-216ENST00000490796 PIGVQ9NUD9 493 aa20.25■□□□□ 0.83
SREBF1-216ENST00000490796 KNTC1P50748 2209 aa20.25■□□□□ 0.83
SREBF1-216ENST00000490796 APC2O95996 2303 aa20.24■□□□□ 0.83
SREBF1-216ENST00000490796 TLR4O00206 839 aa20.24■□□□□ 0.83
SREBF1-216ENST00000490796 PLK4O00444 970 aa20.24■□□□□ 0.83
SREBF1-216ENST00000490796 MCF2LO15068 1137 aa20.24■□□□□ 0.83
SREBF1-216ENST00000490796 LDOC1O95751 146 aaPredicted RBP20.24■□□□□ 0.83
SREBF1-216ENST00000490796 ERCC5P28715 1186 aaPredicted RBP20.24■□□□□ 0.83
SREBF1-216ENST00000490796 MAT2AP31153 395 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms