RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 HECTD1Q9ULT8 2610 aa8.46□□□□□ -1.05
USP39-216ENST00000490193 TBC1D3DA0A087WVF3 549 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 TBC1D3IA0A087WXS9 549 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 TBC1D3EA0A087X179 549 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 TBC1D3KA0A087X1G2 549 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 TBC1D3FA6NER0 549 aaPredicted RBP8.46□□□□□ -1.06
USP39-216ENST00000490193 TBC1D3LB9A6J9 549 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 PRAMEF26H0Y7S4 382 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 TRIM38O00635 465 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 SIGLEC6O43699 453 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 RNGTTO60942 597 aaKnown RBP8.46□□□□□ -1.06
USP39-216ENST00000490193 IL1BP01584 269 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 FYNP06241 537 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 GP1BAP07359 652 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 PAEPP09466 180 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 TBC1D3HP0C7X1 549 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 GIMD1P0DJR0 217 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 CKMT1AP12532 417 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 CD19P15391 556 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 PFKFB1P16118 471 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 DGKAP23743 735 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 LSSP48449 732 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 PLK1P53350 603 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 TAF1BQ53T94 588 aaPredicted RBP8.46□□□□□ -1.06
USP39-216ENST00000490193 DCAF6Q58WW2 860 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 TBC1D3GQ6DHY5 549 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 TBC1D3CQ6IPX1 549 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 PMF1Q6P1K2 205 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 KDM7AQ6ZMT4 941 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 BEND5Q7L4P6 421 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 CCDC117Q8IWD4 279 aaPredicted RBP8.46□□□□□ -1.06
USP39-216ENST00000490193 TBC1D3Q8IZP1 549 aaPredicted RBP8.46□□□□□ -1.06
USP39-216ENST00000490193 APCDD1Q8J025 514 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 CARNMT1Q8N4J0 409 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 TMEM145Q8NBT3 493 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 UBA3Q8TBC4 463 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 FRS2Q8WU20 508 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 TTC9Q92623 222 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 CCDC47Q96A33 483 aaKnown RBP8.46□□□□□ -1.06
USP39-216ENST00000490193 HSFY1Q96LI6 401 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 SERPINB11Q96P15 392 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 DPH1Q9BZG8 443 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 NUCKS1Q9H1E3 243 aaKnown RBP8.46□□□□□ -1.06
USP39-216ENST00000490193 ASCL3Q9NQ33 180 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 CFAP45Q9UL16 551 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 PCDHB1Q9Y5F3 818 aa8.46□□□□□ -1.06
USP39-216ENST00000490193 TDRD6O60522 2096 aaKnown RBP8.45□□□□□ -1.06
USP39-216ENST00000490193 UBR5O95071 2799 aaPredicted RBP8.45□□□□□ -1.06
USP39-216ENST00000490193 FAM237AA0A1B0GTK4 181 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 B8ZZF3 427 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 ALOX15BO15296 676 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 OPA1O60313 960 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 SDC3O75056 442 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 FBXO21O94952 628 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 F13A1P00488 732 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 ZSCAN22P10073 491 aaPredicted RBP8.45□□□□□ -1.06
USP39-216ENST00000490193 C6P13671 934 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 LCP1P13796 627 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 CMA1P23946 247 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 TBXAS1P24557 533 aaPredicted RBP8.45□□□□□ -1.06
USP39-216ENST00000490193 NNMTP40261 264 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 RPL34P49207 117 aaKnown RBP8.45□□□□□ -1.06
USP39-216ENST00000490193 STK19P49842 368 aaPredicted RBP8.45□□□□□ -1.06
USP39-216ENST00000490193 METAP1P53582 386 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 SKOR1P84550 965 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 DAB2P98082 770 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 SULT2A1Q06520 285 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 DPYDQ12882 1025 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 STAT4Q14765 748 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 STILQ15468 1287 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 CNGA2Q16280 664 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 CBWD6Q4V339 395 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 SETMARQ53H47 684 aaPredicted RBP8.45□□□□□ -1.06
USP39-216ENST00000490193 CBWD3Q5JTY5 395 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 CBWD5Q5RIA9 395 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 AGBL4Q5VU57 503 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 FAM46CQ5VWP2 391 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 RNF219Q5W0B1 726 aaPredicted RBP8.45□□□□□ -1.06
USP39-216ENST00000490193 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.45□□□□□ -1.06
USP39-216ENST00000490193 DSG4Q86SJ6 1040 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 CFAP52Q8N1V2 620 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 FAM181AQ8N9Y4 354 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 DQX1Q8TE96 717 aaKnown RBP8.45□□□□□ -1.06
USP39-216ENST00000490193 CLEC4CQ8WTT0 213 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 TFAP2BQ92481 460 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 IFT43Q96FT9 208 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 RPL10LQ96L21 214 aaKnown RBP8.45□□□□□ -1.06
USP39-216ENST00000490193 DEPDC7Q96QD5 511 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 SEMA4CQ9C0C4 833 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 CLMPQ9H6B4 373 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 POLR1BQ9H9Y6 1135 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 USP29Q9HBJ7 922 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 CPNE5Q9HCH3 593 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 PREBQ9HCU5 417 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 KLHL11Q9NVR0 708 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 TJP2Q9UDY2 1190 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 MAPK8IP1Q9UQF2 711 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 SPTA1P02549 2419 aa8.45□□□□□ -1.06
USP39-216ENST00000490193 PIEZO2Q9H5I5 2752 aa8.44□□□□□ -1.06
USP39-216ENST00000490193 LY6G6EA0A0G2JKS1 128 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms