RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 MKLN1Q9UL63 735 aa6.9□□□□□ -1.3
TM9SF3-206ENST00000490192 DUSP10Q9Y6W6 482 aa6.9□□□□□ -1.3
TM9SF3-206ENST00000490192 ZNF536O15090 1300 aa6.9□□□□□ -1.3
TM9SF3-206ENST00000490192 TP73O15350 636 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 RHOP08100 348 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 CHRM4P08173 479 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 SUMO2P61956 95 aaKnown RBP6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 PRAMEP78395 509 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 RAE1P78406 368 aaKnown RBP6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 B4GALNT1Q00973 533 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 E2F1Q01094 437 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 HHEXQ03014 270 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 CEBPZQ03701 1054 aaKnown RBP6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 ABHD18Q0P651 414 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 CCDC15Q0P6D6 951 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 IL13RA2Q14627 380 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 SLC18A3Q16572 532 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 SPDYE7PQ495Y7 208 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 GXYLT1Q4G148 440 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 CCDC92Q53HC0 331 aaPredicted RBP6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 LRCH2Q5VUJ6 765 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 GJB7Q6PEY0 223 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 MFSD6Q6ZSS7 791 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 CEP97Q8IW35 865 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 BRSK2Q8IWQ3 736 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 AFAP1L1Q8TED9 768 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 DESI2Q9BSY9 194 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 CINPQ9BW66 212 aaPredicted RBP6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 POLR1BQ9H9Y6 1135 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 GALNT9Q9HCQ5 603 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 CDH22Q9UJ99 828 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 SLC25A13Q9UJS0 675 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 SNX5Q9Y5X3 404 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 CAPN7Q9Y6W3 813 aa6.89□□□□□ -1.31
TM9SF3-206ENST00000490192 AHRRA9YTQ3 701 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 BTBD18B2RXH4 712 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 AP4M1O00189 453 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 CES2O00748 559 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 TMPRSS11DO60235 418 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 PRAMEF2O60811 474 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 TBX10O75333 385 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 TACC1O75410 805 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 SCAF4O95104 1147 aaKnown RBP6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 CSPG5O95196 566 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 AFPP02771 609 aaKnown RBP6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 IL6RP08887 468 aaPredicted RBP6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 SCG2P13521 617 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 SAT1P21673 171 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 HSD17B4P51659 736 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 ASIC2Q16515 512 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 TCTN3Q6NUS6 607 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 KYAT3Q6YP21 454 aaKnown RBP6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 SLC39A5Q6ZMH5 540 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 PTCHD4Q6ZW05 846 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 SLC46A3Q7Z3Q1 461 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 SLFN11Q7Z7L1 901 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 GALNT7Q86SF2 657 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 IQCA1Q86XH1 822 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 LINC00346Q8IVM7 164 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 POC5Q8NA72 575 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 SRFBP1Q8NEF9 429 aaKnown RBP6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 GOT1L1Q8NHS2 421 aaPredicted RBP6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 LPIN2Q92539 896 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 SLC22A18Q96BI1 424 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 FAM149B1Q96BN6 582 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 ABHD1Q96SE0 405 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 TEX12Q9BXU0 123 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 USP29Q9HBJ7 922 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 SLC35C2Q9NQQ7 365 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 SEL1LQ9UBV2 794 aa6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 ZFR2Q9UPR6 939 aaKnown RBP6.88□□□□□ -1.31
TM9SF3-206ENST00000490192 LAMTOR5O43504 91 aa6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 CEP104O60308 925 aa6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 CCNT1O60563 726 aaKnown RBP6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 MBPP02686 304 aaPredicted RBP6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 TBXAS1P24557 533 aaPredicted RBP6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 SCNN1GP51170 649 aa6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 JAK3P52333 1124 aa6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 MRPL12P52815 198 aaKnown RBP6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 RAD23AP54725 363 aa6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 ITIH3Q06033 890 aa6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 TNFAIP1Q13829 316 aa6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 FRG1Q14331 258 aaKnown RBP6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 DPCR1Q3MIW9 517 aa6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 ZNF362Q5T0B9 420 aaPredicted RBP6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 GKAP1Q5VSY0 366 aaPredicted RBP6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 SARM1Q6SZW1 724 aa6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 C17orf99Q6UX52 265 aa6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 RNF144BQ7Z419 303 aa6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 POLNQ7Z5Q5 900 aa6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 GPR149Q86SP6 731 aa6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 ARHGAP12Q8IWW6 846 aa6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 OR8H3Q8N146 312 aa6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 SIRT6Q8N6T7 355 aa6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 C2CD4CQ8TF44 421 aa6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 FKBP10Q96AY3 582 aa6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 KLHL4Q9C0H6 718 aa6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 ERVMER34-1Q9H9K5 563 aa6.87□□□□□ -1.31
TM9SF3-206ENST00000490192 DECR2Q9NUI1 292 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms