RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, human

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-218	ENST00000490032	DUSP6	Q16828	381 aa		4.18	□□□□□ -1.74
HMGN1-218	ENST00000490032	TBRG1	Q3YBR2	411 aa		4.18	□□□□□ -1.74
HMGN1-218	ENST00000490032	PLK5	Q496M5	336 aa		4.18	□□□□□ -1.74
HMGN1-218	ENST00000490032	INO80D	Q53TQ3	878 aa	Predicted RBP	4.18	□□□□□ -1.74
HMGN1-218	ENST00000490032	CCSAP	Q6IQ19	270 aa	Predicted RBP	4.18	□□□□□ -1.74
HMGN1-218	ENST00000490032		Q6ZTK2	550 aa		4.18	□□□□□ -1.74
HMGN1-218	ENST00000490032	ANKS1B	Q7Z6G8	1248 aa		4.18	□□□□□ -1.74
HMGN1-218	ENST00000490032	IGFN1	Q86VF2	1251 aa		4.18	□□□□□ -1.74
HMGN1-218	ENST00000490032	TMEM200A	Q86VY9	491 aa		4.18	□□□□□ -1.74
HMGN1-218	ENST00000490032	OR1N1	Q8NGS0	311 aa		4.18	□□□□□ -1.74
HMGN1-218	ENST00000490032	BICD2	Q8TD16	824 aa		4.18	□□□□□ -1.74
HMGN1-218	ENST00000490032	NUDCD2	Q8WVJ2	157 aa		4.18	□□□□□ -1.74
HMGN1-218	ENST00000490032	HMGB4	Q8WW32	186 aa		4.18	□□□□□ -1.74
HMGN1-218	ENST00000490032	LIN7C	Q9NUP9	197 aa	Known RBP	4.18	□□□□□ -1.74
HMGN1-218	ENST00000490032	SLC4A4	Q9Y6R1	1079 aa		4.18	□□□□□ -1.74
HMGN1-218	ENST00000490032	DOCK7	Q96N67	2140 aa		4.18	□□□□□ -1.74
HMGN1-218	ENST00000490032	ACOT8	O14734	319 aa		4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	PRC1	O43663	620 aa		4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	FGF3	P11487	239 aa	Predicted RBP	4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	HOXB9	P17482	250 aa	Predicted RBP	4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	CHRNB2	P17787	502 aa		4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	HOXD3	P31249	432 aa	Predicted RBP	4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	TNFSF8	P32971	234 aa		4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	RFX5	P48382	616 aa	Predicted RBP	4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	RCAN1	P53805	252 aa		4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	TBX4	P57082	545 aa		4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	ZP1	P60852	638 aa		4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	RNASEL	Q05823	741 aa	Known RBP	4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	CRYZ	Q08257	329 aa	Known RBP	4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	DCAF12L2	Q5VW00	463 aa		4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	CAPRIN2	Q6IMN6	1127 aa	Known RBP	4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	SLC30A9	Q6PML9	568 aa		4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	CAMK1D	Q8IU85	385 aa		4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	TMEM217	Q8N7C4	229 aa		4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	SLC2A12	Q8TD20	617 aa		4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	B3GNT4	Q9C0J1	378 aa		4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	ARFGAP3	Q9NP61	516 aa		4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	NLRC4	Q9NPP4	1024 aa		4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	SLC22A11	Q9NSA0	550 aa		4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	NCKIPSD	Q9NZQ3	722 aa		4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	ZNF112	Q9UJU3	913 aa		4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032	CDC23	Q9UJX2	597 aa		4.17	□□□□□ -1.74
HMGN1-218	ENST00000490032		A0A1B0GVT2	93 aa		4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	AGAP5	A6NIR3	686 aa		4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	EFCAB8	A8MWE9	144 aa		4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	FFAR2	O15552	330 aa		4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	HEXIM1	O94992	359 aa	Known RBP	4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	TNFRSF6B	O95407	300 aa		4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	ACAA1	P09110	424 aa	Predicted RBP	4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	PRPH2	P23942	346 aa		4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	ENTPD1	P49961	510 aa		4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	KRTAP10-7	P60409	375 aa	Predicted RBP	4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	ABAT	P80404	500 aa		4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	PKP1	Q13835	747 aa		4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	GPR18	Q14330	331 aa		4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	OTUD1	Q5VV17	481 aa	Predicted RBP	4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	NFRKB	Q6P4R8	1299 aa		4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	MORC1	Q86VD1	984 aa		4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	CCDC25	Q86WR0	208 aa		4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	FAM217A	Q8IXS0	508 aa		4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	CADM3	Q8N126	398 aa		4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	ELAC2	Q9BQ52	826 aa	Known RBP	4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	RTKN	Q9BST9	563 aa		4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	KATNAL1	Q9BW62	490 aa		4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	ACTR5	Q9H9F9	607 aa	Predicted RBP	4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	OBP2B	Q9NPH6	170 aa		4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	ARL15	Q9NXU5	204 aa		4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	ICK	Q9UPZ9	632 aa		4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	PCDHA10	Q9Y5I2	948 aa		4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	PTGDR2	Q9Y5Y4	395 aa		4.16	□□□□□ -1.74
HMGN1-218	ENST00000490032	TCRBV7S3A2	A0A539	114 aa		4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	LGALS16	A8MUM7	142 aa		4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032		I6L893	689 aa	Predicted RBP	4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	ITGA2B	P08514	1039 aa		4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	KLRC2	P26717	231 aa		4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	PCP4	P48539	62 aa		4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	OAZ1	P54368	228 aa		4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	DSCR9	P59020	149 aa		4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	DNTTIP2	Q5QJE6	756 aa	Known RBP	4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	TTC22	Q5TAA0	569 aa		4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	ATPAF1	Q5TC12	328 aa	Predicted RBP	4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	NADSYN1	Q6IA69	706 aa		4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	KIAA1324	Q6UXG2	1013 aa	Known RBP	4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	DPP10	Q8N608	796 aa		4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	CMAS	Q8NFW8	434 aa	Predicted RBP	4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	HDHD5	Q9BXW7	423 aa		4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	SEZ6L	Q9BYH1	1024 aa		4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	HIPK3	Q9H422	1215 aa		4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	KLHL31	Q9H511	634 aa		4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	CATSPERB	Q9H7T0	1116 aa		4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	PDE11A	Q9HCR9	933 aa		4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032		Q9N2J8	555 aa		4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	CHST12	Q9NRB3	414 aa		4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	TMEM248	Q9NWD8	314 aa		4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	ZDHHC7	Q9NXF8	308 aa		4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	FZD10	Q9ULW2	581 aa		4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	DAPP1	Q9UN19	280 aa		4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	RAI2	Q9Y5P3	530 aa		4.15	□□□□□ -1.75
HMGN1-218	ENST00000490032	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.14	□□□□□ -1.75

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