RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 HS1BP3Q53T59 392 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 AGBL4Q5VU57 503 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 BROXQ5VW32 411 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 TMC6Q7Z403 805 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 TAC4Q86UU9 113 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 TRIM69Q86WT6 500 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 CHSY1Q86X52 802 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 FRS2Q8WU20 508 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 OR8D1Q8WZ84 308 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 WBP1Q96G27 269 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 KLHDC7BQ96G42 594 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 HIC2Q96JB3 615 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 UCKL1Q9NWZ5 548 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 TJP2Q9UDY2 1190 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 SARDHQ9UL12 918 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 PCDHB4Q9Y5E5 795 aa14.4□□□□□ -0.1
VARS-227ENST00000489979 MYO18BQ8IUG5 2567 aa14.39□□□□□ -0.11
VARS-227ENST00000489979 PRAMEF26H0Y7S4 382 aa14.39□□□□□ -0.11
VARS-227ENST00000489979 RNF225M0QZC1 329 aaPredicted RBP14.39□□□□□ -0.11
VARS-227ENST00000489979 FFAR2O15552 330 aa14.39□□□□□ -0.11
VARS-227ENST00000489979 APOEP02649 317 aa14.39□□□□□ -0.11
VARS-227ENST00000489979 DGKAP23743 735 aa14.39□□□□□ -0.11
VARS-227ENST00000489979 UCNP55089 124 aa14.39□□□□□ -0.11
VARS-227ENST00000489979 NUCB2P80303 420 aa14.39□□□□□ -0.11
VARS-227ENST00000489979 SULT2A1Q06520 285 aa14.39□□□□□ -0.11
VARS-227ENST00000489979 CNTN1Q12860 1018 aa14.39□□□□□ -0.11
VARS-227ENST00000489979 SETMARQ53H47 684 aaPredicted RBP14.39□□□□□ -0.11
VARS-227ENST00000489979 ZC3H12AQ5D1E8 599 aaKnown RBP14.39□□□□□ -0.11
VARS-227ENST00000489979 FAM46CQ5VWP2 391 aa14.39□□□□□ -0.11
VARS-227ENST00000489979 CDCP2Q5VXM1 449 aa14.39□□□□□ -0.11
VARS-227ENST00000489979 OR4C6Q8NH72 309 aa14.39□□□□□ -0.11
VARS-227ENST00000489979 FAM149B1Q96BN6 582 aa14.39□□□□□ -0.11
VARS-227ENST00000489979 MYOCQ99972 504 aa14.39□□□□□ -0.11
VARS-227ENST00000489979 SEMA4CQ9C0C4 833 aa14.39□□□□□ -0.11
VARS-227ENST00000489979 CAAP1Q9H8G2 361 aa14.39□□□□□ -0.11
VARS-227ENST00000489979 FAM237AA0A1B0GTK4 181 aa14.38□□□□□ -0.11
VARS-227ENST00000489979 A0A1B0GVM2 712 aa14.38□□□□□ -0.11
VARS-227ENST00000489979 SLC16A3O15427 465 aaKnown RBP14.38□□□□□ -0.11
VARS-227ENST00000489979 OPA1O60313 960 aa14.38□□□□□ -0.11
VARS-227ENST00000489979 USP12O75317 370 aa14.38□□□□□ -0.11
VARS-227ENST00000489979 THEGLP0DJG4 465 aa14.38□□□□□ -0.11
VARS-227ENST00000489979 MYF5P13349 255 aa14.38□□□□□ -0.11
VARS-227ENST00000489979 SLC12A1Q13621 1099 aa14.38□□□□□ -0.11
VARS-227ENST00000489979 STILQ15468 1287 aa14.38□□□□□ -0.11
VARS-227ENST00000489979 ACCSLQ4AC99 568 aa14.38□□□□□ -0.11
VARS-227ENST00000489979 SYPL2Q5VXT5 272 aa14.38□□□□□ -0.11
VARS-227ENST00000489979 KRBA2Q6ZNG9 492 aa14.38□□□□□ -0.11
VARS-227ENST00000489979 DSG4Q86SJ6 1040 aa14.38□□□□□ -0.11
VARS-227ENST00000489979 CIR1Q86X95 450 aaPredicted RBP14.38□□□□□ -0.11
VARS-227ENST00000489979 LSMEM2Q8N112 164 aa14.38□□□□□ -0.11
VARS-227ENST00000489979 TMEM145Q8NBT3 493 aa14.38□□□□□ -0.11
VARS-227ENST00000489979 KCNE4Q8WWG9 221 aa14.38□□□□□ -0.11
VARS-227ENST00000489979 DEPDC7Q96QD5 511 aa14.38□□□□□ -0.11
VARS-227ENST00000489979 KLHL11Q9NVR0 708 aa14.38□□□□□ -0.11
VARS-227ENST00000489979 NAV2Q8IVL1 2488 aa14.38□□□□□ -0.11
VARS-227ENST00000489979 C1QTNF3-AMACRE9PGA6 284 aa14.37□□□□□ -0.11
VARS-227ENST00000489979 F5H5T6 163 aa14.37□□□□□ -0.11
VARS-227ENST00000489979 SLC31A1O15431 190 aa14.37□□□□□ -0.11
VARS-227ENST00000489979 KLK10O43240 276 aa14.37□□□□□ -0.11
VARS-227ENST00000489979 RNGTTO60942 597 aaKnown RBP14.37□□□□□ -0.11
VARS-227ENST00000489979 CSO75390 466 aaKnown RBP14.37□□□□□ -0.11
VARS-227ENST00000489979 DXOO77932 396 aaKnown RBP14.37□□□□□ -0.11
VARS-227ENST00000489979 GIMD1P0DJR0 217 aa14.37□□□□□ -0.11
VARS-227ENST00000489979 CKMT1AP12532 417 aa14.37□□□□□ -0.11
VARS-227ENST00000489979 LSSP48449 732 aa14.37□□□□□ -0.11
VARS-227ENST00000489979 TAS2R38P59533 333 aa14.37□□□□□ -0.11
VARS-227ENST00000489979 ERVPABLB-1P60509 514 aa14.37□□□□□ -0.11
VARS-227ENST00000489979 KCNMA1Q12791 1236 aa14.37□□□□□ -0.11
VARS-227ENST00000489979 LY6DQ14210 128 aa14.37□□□□□ -0.11
VARS-227ENST00000489979 CCAR2Q8N163 923 aaKnown RBP14.37□□□□□ -0.11
VARS-227ENST00000489979 KLK6Q92876 244 aa14.37□□□□□ -0.11
VARS-227ENST00000489979 KAT5Q92993 513 aa14.37□□□□□ -0.11
VARS-227ENST00000489979 SLC35C1Q96A29 364 aa14.37□□□□□ -0.11
VARS-227ENST00000489979 BTN2A3PQ96KV6 586 aa14.37□□□□□ -0.11
VARS-227ENST00000489979 SPATA32Q96LK8 384 aa14.37□□□□□ -0.11
VARS-227ENST00000489979 PREBQ9HCU5 417 aa14.37□□□□□ -0.11
VARS-227ENST00000489979 ST7Q9NRC1 585 aa14.37□□□□□ -0.11
VARS-227ENST00000489979 PPM1HQ9ULR3 514 aa14.37□□□□□ -0.11
VARS-227ENST00000489979 PYCARD-AS1I3L0S3 204 aa14.36□□□□□ -0.11
VARS-227ENST00000489979 SART1O43290 800 aaKnown RBP14.36□□□□□ -0.11
VARS-227ENST00000489979 ATP9BO43861 1147 aa14.36□□□□□ -0.11
VARS-227ENST00000489979 PIAS2O75928 621 aa14.36□□□□□ -0.11
VARS-227ENST00000489979 HSP90AA1P07900 732 aaKnown RBP14.36□□□□□ -0.11
VARS-227ENST00000489979 PRLRP16471 622 aa14.36□□□□□ -0.11
VARS-227ENST00000489979 ZNF18P17022 549 aa14.36□□□□□ -0.11
VARS-227ENST00000489979 VASPP50552 380 aaPredicted RBP14.36□□□□□ -0.11
VARS-227ENST00000489979 PLK1P53350 603 aa14.36□□□□□ -0.11
VARS-227ENST00000489979 DLG2Q15700 870 aa14.36□□□□□ -0.11
VARS-227ENST00000489979 CXorf57Q6NSI4 855 aaKnown RBP14.36□□□□□ -0.11
VARS-227ENST00000489979 Q6ZVU0 165 aa14.36□□□□□ -0.11
VARS-227ENST00000489979 PPM1KQ8N3J5 372 aa14.36□□□□□ -0.11
VARS-227ENST00000489979 FAM181AQ8N9Y4 354 aa14.36□□□□□ -0.11
VARS-227ENST00000489979 TTC9Q92623 222 aa14.36□□□□□ -0.11
VARS-227ENST00000489979 SNX21Q969T3 373 aa14.36□□□□□ -0.11
VARS-227ENST00000489979 VCPIP1Q96JH7 1222 aa14.36□□□□□ -0.11
VARS-227ENST00000489979 APOLD1Q96LR9 279 aa14.36□□□□□ -0.11
VARS-227ENST00000489979 NT5C1BQ96P26 610 aa14.36□□□□□ -0.11
VARS-227ENST00000489979 TSG101Q99816 390 aa14.36□□□□□ -0.11
VARS-227ENST00000489979 OSBPL2Q9H1P3 480 aa14.36□□□□□ -0.11
VARS-227ENST00000489979 POLR1BQ9H9Y6 1135 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms