RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 DFFAO00273 331 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 RASA4O43374 803 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 MAFKO60675 156 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 OPHN1O60890 802 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 RAMP2O60895 175 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 PRAMEF12O95522 483 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 OR1E1P30953 314 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 MAGEA6P43360 314 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 PAPOLAP51003 745 aaKnown RBP14.5□□□□□ -0.09
VPS26A-205ENST00000489656 SGSHP51688 502 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 RPS24P62847 133 aaKnown RBP14.5□□□□□ -0.09
VPS26A-205ENST00000489656 IFI35P80217 286 aaPredicted RBP14.5□□□□□ -0.09
VPS26A-205ENST00000489656 WASHC5Q12768 1159 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 HLTFQ14527 1009 aaKnown RBP eCLIP14.5□□□□□ -0.09
VPS26A-205ENST00000489656 MORF4L2Q15014 288 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 BEND6Q5SZJ8 279 aaPredicted RBP14.5□□□□□ -0.09
VPS26A-205ENST00000489656 C6orf118Q5T5N4 469 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 IZUMO3Q5VZ72 239 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 TIGD7Q6NT04 549 aaPredicted RBP14.5□□□□□ -0.09
VPS26A-205ENST00000489656 HIBCHQ6NVY1 386 aaPredicted RBP14.5□□□□□ -0.09
VPS26A-205ENST00000489656 B4GALNT4Q76KP1 1039 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 PRUNE1Q86TP1 453 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 HOOK3Q86VS8 718 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 CIR1Q86X95 450 aaPredicted RBP14.5□□□□□ -0.09
VPS26A-205ENST00000489656 BBS7Q8IWZ6 715 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 NPAS3Q8IXF0 933 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 CFAP52Q8N1V2 620 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 CCDC33Q8N5R6 958 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 NETO2Q8NC67 525 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 ING5Q8WYH8 240 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 CAVIN3Q969G5 261 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 OTUB2Q96DC9 234 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 FOXP3Q9BZS1 431 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 SMG9Q9H0W8 520 aaKnown RBP14.5□□□□□ -0.09
VPS26A-205ENST00000489656 MAGEH1Q9H213 219 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 NEUROG2Q9H2A3 272 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 TRPV4Q9HBA0 871 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 GDE1Q9NZC3 331 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 CLEC1BQ9P126 229 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 TBC1D14Q9P2M4 693 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 TPX2Q9ULW0 747 aaKnown RBP14.5□□□□□ -0.09
VPS26A-205ENST00000489656 SHOC2Q9UQ13 582 aa14.5□□□□□ -0.09
VPS26A-205ENST00000489656 COLQQ9Y215 455 aaPredicted RBP14.5□□□□□ -0.09
VPS26A-205ENST00000489656 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.49□□□□□ -0.09
VPS26A-205ENST00000489656 ILVBLA1L0T0 632 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 RNF103O00237 685 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 MATN3O15232 486 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 PTPN3P26045 913 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 VPS41P49754 854 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 ITGA8P53708 1063 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 PLTPP55058 493 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 ZNF177Q13360 481 aaPredicted RBP14.49□□□□□ -0.09
VPS26A-205ENST00000489656 SERINC3Q13530 473 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 GRIN2CQ14957 1233 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 POLD3Q15054 466 aaPredicted RBP14.49□□□□□ -0.09
VPS26A-205ENST00000489656 KCTD19Q17RG1 926 aaPredicted RBP14.49□□□□□ -0.09
VPS26A-205ENST00000489656 MPPE1Q53F39 396 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 ANKRD20A2Q5SQ80 823 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 RNASEH2BQ5TBB1 312 aaKnown RBP14.49□□□□□ -0.09
VPS26A-205ENST00000489656 ANKRD20A1Q5TYW2 823 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 ANKRD20A3Q5VUR7 823 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 ARID3BQ8IVW6 561 aaPredicted RBP14.49□□□□□ -0.09
VPS26A-205ENST00000489656 GSPT2Q8IYD1 628 aaKnown RBP14.49□□□□□ -0.09
VPS26A-205ENST00000489656 CELF5Q8N6W0 485 aaKnown RBP14.49□□□□□ -0.09
VPS26A-205ENST00000489656 TDRD5Q8NAT2 981 aaKnown RBP14.49□□□□□ -0.09
VPS26A-205ENST00000489656 RIN3Q8TB24 985 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 ZSCAN18Q8TBC5 510 aaPredicted RBP14.49□□□□□ -0.09
VPS26A-205ENST00000489656 FBXO25Q8TCJ0 367 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 LRRN4Q8WUT4 740 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 MAML1Q92585 1016 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 TMA16Q96EY4 203 aaKnown RBP14.49□□□□□ -0.09
VPS26A-205ENST00000489656 HMCESQ96FZ2 354 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 FMO2Q99518 471 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 IL12RB2Q99665 862 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 S1PR5Q9H228 398 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 ARFGAP3Q9NP61 516 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 OBP2AQ9NY56 170 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 MTRF1LQ9UGC7 380 aaKnown RBP14.49□□□□□ -0.09
VPS26A-205ENST00000489656 TRHDEQ9UKU6 1024 aa14.49□□□□□ -0.09
VPS26A-205ENST00000489656 TRDMT1O14717 391 aaKnown RBP14.48□□□□□ -0.09
VPS26A-205ENST00000489656 SLC9A3R1O14745 358 aaPredicted RBP14.48□□□□□ -0.09
VPS26A-205ENST00000489656 TSPAN3O60637 253 aa14.48□□□□□ -0.09
VPS26A-205ENST00000489656 TBL1XO60907 577 aa14.48□□□□□ -0.09
VPS26A-205ENST00000489656 TBX10O75333 385 aa14.48□□□□□ -0.09
VPS26A-205ENST00000489656 LUC7L3O95232 432 aaKnown RBP14.48□□□□□ -0.09
VPS26A-205ENST00000489656 FDFT1P37268 417 aa14.48□□□□□ -0.09
VPS26A-205ENST00000489656 ETFBP38117 255 aa14.48□□□□□ -0.09
VPS26A-205ENST00000489656 NRLP54845 237 aa14.48□□□□□ -0.09
VPS26A-205ENST00000489656 GNA12Q03113 381 aa14.48□□□□□ -0.09
VPS26A-205ENST00000489656 TNK2Q07912 1038 aa14.48□□□□□ -0.09
VPS26A-205ENST00000489656 IL10RBQ08334 325 aa14.48□□□□□ -0.09
VPS26A-205ENST00000489656 ANO4Q32M45 955 aa14.48□□□□□ -0.09
VPS26A-205ENST00000489656 TEX44Q53QW1 395 aa14.48□□□□□ -0.09
VPS26A-205ENST00000489656 CXorf57Q6NSI4 855 aaKnown RBP14.48□□□□□ -0.09
VPS26A-205ENST00000489656 ARHGAP36Q6ZRI8 547 aa14.48□□□□□ -0.09
VPS26A-205ENST00000489656 ARHGEF18Q6ZSZ5 1173 aa14.48□□□□□ -0.09
VPS26A-205ENST00000489656 PPIL6Q8IXY8 311 aa14.48□□□□□ -0.09
VPS26A-205ENST00000489656 ZNF567Q8N184 647 aa14.48□□□□□ -0.09
VPS26A-205ENST00000489656 CCDC110Q8TBZ0 833 aa14.48□□□□□ -0.09
VPS26A-205ENST00000489656 CPT1BQ92523 772 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms