RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 PTPRZ1P23471 2315 aaPredicted RBP17.8■□□□□ 0.44
MDC1-206ENST00000489540 PCK1P35558 622 aa17.8■□□□□ 0.44
MDC1-206ENST00000489540 ETFBP38117 255 aa17.8■□□□□ 0.44
MDC1-206ENST00000489540 MAPKAPK2P49137 400 aa17.8■□□□□ 0.44
MDC1-206ENST00000489540 ZNF75DP51815 510 aa17.8■□□□□ 0.44
MDC1-206ENST00000489540 ZNF252P-AS1Q0IIN9 211 aa17.8■□□□□ 0.44
MDC1-206ENST00000489540 PIGHQ14442 188 aaPredicted RBP17.8■□□□□ 0.44
MDC1-206ENST00000489540 ERMARDQ5T6L9 678 aa17.8■□□□□ 0.44
MDC1-206ENST00000489540 RIF1Q5UIP0 2472 aaKnown RBP17.8■□□□□ 0.44
MDC1-206ENST00000489540 PMS2CLQ68D20 193 aa17.8■□□□□ 0.44
MDC1-206ENST00000489540 PSTKQ8IV42 348 aaKnown RBP17.8■□□□□ 0.44
MDC1-206ENST00000489540 DCLK2Q8N568 766 aa17.8■□□□□ 0.44
MDC1-206ENST00000489540 ARFGAP1Q8N6T3 406 aa17.8■□□□□ 0.44
MDC1-206ENST00000489540 DCAF4L2Q8NA75 395 aa17.8■□□□□ 0.44
MDC1-206ENST00000489540 CHP1Q99653 195 aa17.8■□□□□ 0.44
MDC1-206ENST00000489540 TMEM248Q9NWD8 314 aa17.8■□□□□ 0.44
MDC1-206ENST00000489540 USP36Q9P275 1121 aaKnown RBP17.8■□□□□ 0.44
MDC1-206ENST00000489540 MBD1Q9UIS9 605 aaPredicted RBP17.8■□□□□ 0.44
MDC1-206ENST00000489540 MYO15AQ9UKN7 3530 aa17.8■□□□□ 0.44
MDC1-206ENST00000489540 IGHV1OR15-9A0A0B4J2B8 117 aa17.79■□□□□ 0.44
MDC1-206ENST00000489540 A0A0D9SEW6 157 aa17.79■□□□□ 0.44
MDC1-206ENST00000489540 RNASEH1O60930 286 aaKnown RBP17.79■□□□□ 0.44
MDC1-206ENST00000489540 EPN2O95208 641 aa17.79■□□□□ 0.44
MDC1-206ENST00000489540 H2AFZP0C0S5 128 aa17.79■□□□□ 0.44
MDC1-206ENST00000489540 BCKDHBP21953 392 aa17.79■□□□□ 0.44
MDC1-206ENST00000489540 EPHB2P29323 1055 aa17.79■□□□□ 0.44
MDC1-206ENST00000489540 MIPP30301 263 aa17.79■□□□□ 0.44
MDC1-206ENST00000489540 OXTRP30559 389 aa17.79■□□□□ 0.44
MDC1-206ENST00000489540 HTR7P34969 479 aa17.79■□□□□ 0.44
MDC1-206ENST00000489540 GNA12Q03113 381 aa17.79■□□□□ 0.44
MDC1-206ENST00000489540 C9orf64Q5T6V5 341 aa17.79■□□□□ 0.44
MDC1-206ENST00000489540 H2AFVQ71UI9 128 aa17.79■□□□□ 0.44
MDC1-206ENST00000489540 NLRP14Q86W24 1093 aa17.79■□□□□ 0.44
MDC1-206ENST00000489540 PYROXD2Q8N2H3 581 aa17.79■□□□□ 0.44
MDC1-206ENST00000489540 FRMD1Q8N878 549 aa17.79■□□□□ 0.44
MDC1-206ENST00000489540 NUP85Q9BW27 656 aa17.79■□□□□ 0.44
MDC1-206ENST00000489540 NHEJ1Q9H9Q4 299 aaPredicted RBP17.79■□□□□ 0.44
MDC1-206ENST00000489540 DONSONQ9NYP3 566 aa17.79■□□□□ 0.44
MDC1-206ENST00000489540 PCSK1NQ9UHG2 260 aa17.79■□□□□ 0.44
MDC1-206ENST00000489540 IP6K2Q9UHH9 426 aa17.79■□□□□ 0.44
MDC1-206ENST00000489540 CYP8B1Q9UNU6 501 aa17.79■□□□□ 0.44
MDC1-206ENST00000489540 DMDP11532 3685 aa17.78■□□□□ 0.44
MDC1-206ENST00000489540 MYO1FO00160 1098 aa17.78■□□□□ 0.44
MDC1-206ENST00000489540 ATP9BO43861 1147 aa17.78■□□□□ 0.44
MDC1-206ENST00000489540 CREB3O43889 395 aa17.78■□□□□ 0.44
MDC1-206ENST00000489540 SIN3BO75182 1162 aa17.78■□□□□ 0.44
MDC1-206ENST00000489540 LRCH4O75427 683 aa17.78■□□□□ 0.44
MDC1-206ENST00000489540 CD6P30203 668 aa17.78■□□□□ 0.44
MDC1-206ENST00000489540 STK19P49842 368 aaPredicted RBP17.78■□□□□ 0.44
MDC1-206ENST00000489540 RPS14P62263 151 aaKnown RBP17.78■□□□□ 0.44
MDC1-206ENST00000489540 SLC20A2Q08357 652 aa17.78■□□□□ 0.44
MDC1-206ENST00000489540 SFSWAPQ12872 951 aaKnown RBP17.78■□□□□ 0.44
MDC1-206ENST00000489540 ZNF776Q68DI1 518 aaPredicted RBP17.78■□□□□ 0.44
MDC1-206ENST00000489540 FRS2Q8WU20 508 aa17.78■□□□□ 0.44
MDC1-206ENST00000489540 CTNNBL1Q8WYA6 563 aaPredicted RBP17.78■□□□□ 0.44
MDC1-206ENST00000489540 PTPRN2Q92932 1015 aa17.78■□□□□ 0.44
MDC1-206ENST00000489540 PSMB7Q99436 277 aa17.78■□□□□ 0.44
MDC1-206ENST00000489540 SPON2Q9BUD6 331 aa17.78■□□□□ 0.44
MDC1-206ENST00000489540 RSPH9Q9H1X1 276 aaPredicted RBP17.78■□□□□ 0.44
MDC1-206ENST00000489540 MTG2Q9H4K7 406 aa17.78■□□□□ 0.44
MDC1-206ENST00000489540 CATSPERBQ9H7T0 1116 aa17.78■□□□□ 0.44
MDC1-206ENST00000489540 USP18Q9UMW8 372 aa17.78■□□□□ 0.44
MDC1-206ENST00000489540 SCML1Q9UN30 329 aa17.78■□□□□ 0.44
MDC1-206ENST00000489540 AP4E1Q9UPM8 1137 aa17.78■□□□□ 0.44
MDC1-206ENST00000489540 NEU3Q9UQ49 428 aa17.78■□□□□ 0.44
MDC1-206ENST00000489540 HS3ST2Q9Y278 367 aa17.78■□□□□ 0.44
MDC1-206ENST00000489540 CXorf51AA0A1B0GTR3 108 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 WASH4PA8MWX3 477 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 NDUFS2O75306 463 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 IGLV3-19P01714 112 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 DNTTP04053 509 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 NUMBP49757 651 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 TPMTP51580 245 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 CLCN6P51797 869 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 ZNF135P52742 658 aaPredicted RBP17.77■□□□□ 0.44
MDC1-206ENST00000489540 RPL6Q02878 288 aaKnown RBP17.77■□□□□ 0.44
MDC1-206ENST00000489540 SEMA3BQ13214 749 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 DLG2Q15700 870 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 ACCSLQ4AC99 568 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 BOLA3Q53S33 107 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 RETSATQ6NUM9 610 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 SH2D3CQ8N5H7 860 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 NIPA2Q8N8Q9 360 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 RTL3Q8N8U3 475 aaKnown RBP17.77■□□□□ 0.44
MDC1-206ENST00000489540 OR7D4Q8NG98 312 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 ARHGEF26Q96DR7 871 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 MAGEH1Q9H213 219 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 ARRDC1-AS1Q9H2J1 176 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 DHX35Q9H5Z1 703 aaKnown RBP17.77■□□□□ 0.44
MDC1-206ENST00000489540 UVRAGQ9P2Y5 699 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 DNAI1Q9UI46 699 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 LCMT1Q9UIC8 334 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 VPS51Q9UID3 782 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 ANAPC7Q9UJX3 599 aa17.77■□□□□ 0.44
MDC1-206ENST00000489540 EP300Q09472 2414 aaPredicted RBP17.76■□□□□ 0.43
MDC1-206ENST00000489540 OTOGLQ3ZCN5 2332 aa17.76■□□□□ 0.43
MDC1-206ENST00000489540 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.76■□□□□ 0.43
MDC1-206ENST00000489540 FGF10O15520 208 aaPredicted RBP17.76■□□□□ 0.43
MDC1-206ENST00000489540 FOXD2O60548 495 aaPredicted RBP17.76■□□□□ 0.43
MDC1-206ENST00000489540 SNAP91O60641 907 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms