RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 ANKRD20A2Q5SQ80 823 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 ANKRD20A1Q5TYW2 823 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 HHATQ5VTY9 493 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 ANKRD20A3Q5VUR7 823 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 OTUD1Q5VV17 481 aaPredicted RBP8.68□□□□□ -1.02
VTI1A-207ENST00000489357 ITPRIPL1Q6GPH6 555 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 MRPL14Q6P1L8 145 aaKnown RBP8.68□□□□□ -1.02
VTI1A-207ENST00000489357 TIFABQ6ZNK6 161 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 CAND1Q86VP6 1230 aaKnown RBP8.68□□□□□ -1.02
VTI1A-207ENST00000489357 ANKMY2Q8IV38 441 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 LZTR1Q8N653 840 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 CCDC185Q8N715 623 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 ANKRD42Q8N9B4 389 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 LRRC8CQ8TDW0 803 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 CDKL2Q92772 493 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 TIFAQ96CG3 184 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 HDAC11Q96DB2 347 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 FUBP3Q96I24 572 aaKnown RBP eCLIP8.68□□□□□ -1.02
VTI1A-207ENST00000489357 CASD1Q96PB1 797 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 CDX2Q99626 313 aaPredicted RBP8.68□□□□□ -1.02
VTI1A-207ENST00000489357 PKMYT1Q99640 499 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 SMOQ99835 787 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 ELAC2Q9BQ52 826 aaKnown RBP8.68□□□□□ -1.02
VTI1A-207ENST00000489357 OXCT2Q9BYC2 517 aaPredicted RBP8.68□□□□□ -1.02
VTI1A-207ENST00000489357 PITPNM3Q9BZ71 974 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 ULBP1Q9BZM6 244 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 OSBPL2Q9H1P3 480 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 NKX2-4Q9H2Z4 354 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 RABEP2Q9H5N1 569 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 ZNF576Q9H609 170 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 RXFP1Q9HBX9 757 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 FGFR1OP2Q9NVK5 253 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 GPATCH2LQ9NWQ4 482 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 MSRAQ9UJ68 235 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 CHMP2BQ9UQN3 213 aa8.68□□□□□ -1.02
VTI1A-207ENST00000489357 MAGEB16A2A368 324 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 SDR42E2A6NKP2 422 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 C5orf67F2Z3F1 127 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 EEF2KO00418 725 aaKnown RBP8.67□□□□□ -1.02
VTI1A-207ENST00000489357 FGF10O15520 208 aaPredicted RBP8.67□□□□□ -1.02
VTI1A-207ENST00000489357 EDF1O60869 148 aaKnown RBP8.67□□□□□ -1.02
VTI1A-207ENST00000489357 ATP2C2O75185 946 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 B3GAT3O94766 335 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 C1QAP02745 245 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 CA3P07451 260 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 DHRS4L1P0CG22 281 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 CREB1P16220 341 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 TFE3P19532 575 aaPredicted RBP8.67□□□□□ -1.02
VTI1A-207ENST00000489357 CCNFP41002 786 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 SCNN1GP51170 649 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 MAP3K7CLP57077 242 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 TPI1P60174 286 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 TSPY1Q01534 308 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 NRG1Q02297 640 aaPredicted RBP8.67□□□□□ -1.02
VTI1A-207ENST00000489357 PPIDQ08752 370 aaKnown RBP8.67□□□□□ -1.02
VTI1A-207ENST00000489357 GALNT2Q10471 571 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 SMARCB1Q12824 385 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 ILF2Q12905 390 aaKnown RBP8.67□□□□□ -1.02
VTI1A-207ENST00000489357 SLC10A2Q12908 348 aaPredicted RBP8.67□□□□□ -1.02
VTI1A-207ENST00000489357 GRIN2CQ14957 1233 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 SETDB1Q15047 1291 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 LRRC14Q15048 493 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 KBTBD12Q3ZCT8 623 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 GALNTL6Q49A17 601 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 TIGD5Q53EQ6 642 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 RAB6CQ53S08 254 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 CLLU1OSQ5K130 101 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 FYB2Q5VWT5 728 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 GLB1LQ6UWU2 654 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 SH2D5Q6ZV89 423 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 MARK2Q7KZI7 788 aaKnown RBP8.67□□□□□ -1.02
VTI1A-207ENST00000489357 FAM131BQ86XD5 332 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 CCDC117Q8IWD4 279 aaPredicted RBP8.67□□□□□ -1.02
VTI1A-207ENST00000489357 KLHDC8BQ8IXV7 354 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 CMTR2Q8IYT2 770 aaKnown RBP8.67□□□□□ -1.02
VTI1A-207ENST00000489357 ARHGAP18Q8N392 663 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 CCDC110Q8TBZ0 833 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 MYLIPQ8WY64 445 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 FATE1Q969F0 183 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 STAMBPL1Q96FJ0 436 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 SIGLEC10Q96LC7 697 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 CEP295NLQ96MC4 621 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 HAPLN3Q96S86 360 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 COLEC11Q9BWP8 271 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 RAB6CQ9H0N0 254 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 WDR6Q9NNW5 1121 aaKnown RBP8.67□□□□□ -1.02
VTI1A-207ENST00000489357 ABCC13Q9NSE7 274 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 PIGVQ9NUD9 493 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 MOCS1Q9NZB8 636 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 TTLL3Q9Y4R7 772 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 PCDHB7Q9Y5E2 793 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 USH1CQ9Y6N9 552 aa8.67□□□□□ -1.02
VTI1A-207ENST00000489357 PTPRDP23468 1912 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 PLXNA4Q9HCM2 1894 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 MYBPHLA2RUH7 354 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 CARNS1A5YM72 827 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 YJEFN3A6XGL0 299 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 MEIS3P2A8K0S8 358 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 E7ENQ6 273 aa8.66□□□□□ -1.02
VTI1A-207ENST00000489357 RNF103O00237 685 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms