RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 ILVBLA1L0T0 632 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 TTC34A8MYJ7 566 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 I6L893 689 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-218ENST00000489037 KHNYNO15037 678 aaKnown RBP14.66□□□□□ -0.06
BRCA1-218ENST00000489037 SIN3BO75182 1162 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 GYPCP04921 128 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 PLEKP08567 350 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-218ENST00000489037 TGM1P22735 817 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 PSMA2P25787 234 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 CASP14P31944 242 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 ETFBP38117 255 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 STK19P49842 368 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-218ENST00000489037 TPMTP51580 245 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 ZNF33AQ06730 810 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 WDR45BQ5MNZ6 344 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 PLA2G2CQ5R387 149 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 ZNF783Q6ZMS7 281 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 TMC6Q7Z403 805 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 RABEPKQ7Z6M1 372 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 SYT12Q8IV01 421 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 ZNF683Q8IZ20 524 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 RGL4Q8IZJ4 473 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 DEFB119Q8N690 84 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 TBC1D31Q96DN5 1066 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 TOE1Q96GM8 510 aaKnown RBP14.66□□□□□ -0.06
BRCA1-218ENST00000489037 MYO19Q96H55 970 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 NCAPGQ9BPX3 1015 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 WSB2Q9NYS7 404 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-218ENST00000489037 MYO1AQ9UBC5 1043 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 ADAMTS1Q9UHI8 967 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 FARP1Q9Y4F1 1045 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-218ENST00000489037 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.66□□□□□ -0.06
BRCA1-218ENST00000489037 CEP250Q9BV73 2442 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 NUMA1Q14980 2115 aa14.66□□□□□ -0.06
BRCA1-218ENST00000489037 MEI4A8MW99 385 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 ATMINO43313 823 aaPredicted RBP14.65□□□□□ -0.06
BRCA1-218ENST00000489037 RHOQP17081 205 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 HOXD12P35452 270 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 PTGER3P43115 390 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 MAPKAPK2P49137 400 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 NUMBP49757 651 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 VASPP50552 380 aaPredicted RBP14.65□□□□□ -0.06
BRCA1-218ENST00000489037 RPS14P62263 151 aaKnown RBP14.65□□□□□ -0.06
BRCA1-218ENST00000489037 SCAPQ12770 1279 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 SF3A2Q15428 464 aaKnown RBP14.65□□□□□ -0.06
BRCA1-218ENST00000489037 RSPO4Q2I0M5 234 aaPredicted RBP14.65□□□□□ -0.06
BRCA1-218ENST00000489037 RAB6CQ53S08 254 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 C9orf64Q5T6V5 341 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 RETSATQ6NUM9 610 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 DSG4Q86SJ6 1040 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 FAM124AQ86V42 546 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 DRC7Q8IY82 874 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 CCDC185Q8N715 623 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 CEP76Q8TAP6 659 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 NETO1Q8TDF5 533 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 ALG14Q96F25 216 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 CCDC114Q96M63 670 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 EPAS1Q99814 870 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 SPON2Q9BUD6 331 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 GPR174Q9BXC1 333 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 NUSAP1Q9BXS6 441 aaKnown RBP14.65□□□□□ -0.06
BRCA1-218ENST00000489037 RAB6CQ9H0N0 254 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 ISCUQ9H1K1 167 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 RSPH9Q9H1X1 276 aaPredicted RBP14.65□□□□□ -0.06
BRCA1-218ENST00000489037 MTG2Q9H4K7 406 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 OR51B4Q9Y5P0 310 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 WDR87Q6ZQQ6 2873 aa14.65□□□□□ -0.06
BRCA1-218ENST00000489037 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.64□□□□□ -0.07
BRCA1-218ENST00000489037 IGLV3-19P01714 112 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 GNSP15586 552 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 ITPKAP23677 461 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 L1CAMP32004 1257 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 ELAVL3Q14576 367 aaKnown RBP14.64□□□□□ -0.07
BRCA1-218ENST00000489037 PUM1Q14671 1186 aaKnown RBP eCLIP14.64□□□□□ -0.07
BRCA1-218ENST00000489037 DLG2Q15700 870 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 HGSNATQ68CP4 663 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 IL31Q6EBC2 164 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 MMAAQ8IVH4 418 aaKnown RBP14.64□□□□□ -0.07
BRCA1-218ENST00000489037 DCAF4L2Q8NA75 395 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 ATP11CQ8NB49 1132 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 CADM4Q8NFZ8 388 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 OR8K1Q8NGG5 319 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 OR52K2Q8NGK3 314 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 OR8D1Q8WZ84 308 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 ZNF419Q96HQ0 510 aaPredicted RBP14.64□□□□□ -0.07
BRCA1-218ENST00000489037 HSPA12BQ96MM6 686 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 OMDQ99983 421 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 BTBD1Q9H0C5 482 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 PCED1AQ9H1Q7 454 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 DEF6Q9H4E7 631 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 CATSPERBQ9H7T0 1116 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 SGK2Q9HBY8 427 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 ATP13A1Q9HD20 1204 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 CD93Q9NPY3 652 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 DONSONQ9NYP3 566 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 SUSD2Q9UGT4 822 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 FZD10Q9ULW2 581 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 HPCAL4Q9UM19 191 aa14.64□□□□□ -0.07
BRCA1-218ENST00000489037 TMEM191CA6NGB0 347 aa14.63□□□□□ -0.07
BRCA1-218ENST00000489037 CBX4O00257 560 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms