RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 RAB3IL1Q8TBN0 382 aa12.96□□□□□ -0.33
CLIC4-202ENST00000488683 WNT8BQ93098 351 aa12.96□□□□□ -0.33
CLIC4-202ENST00000488683 PCED1BQ96HM7 432 aa12.96□□□□□ -0.33
CLIC4-202ENST00000488683 OR52B2Q96RD2 323 aa12.96□□□□□ -0.33
CLIC4-202ENST00000488683 OMDQ99983 421 aa12.96□□□□□ -0.33
CLIC4-202ENST00000488683 MMADHCQ9H3L0 296 aaPredicted RBP12.96□□□□□ -0.33
CLIC4-202ENST00000488683 BATF3Q9NR55 127 aa12.96□□□□□ -0.33
CLIC4-202ENST00000488683 RCOR3Q9P2K3 495 aaPredicted RBP12.96□□□□□ -0.33
CLIC4-202ENST00000488683 SLC39A10Q9ULF5 831 aa12.96□□□□□ -0.33
CLIC4-202ENST00000488683 MTF2Q9Y483 593 aaPredicted RBP12.96□□□□□ -0.33
CLIC4-202ENST00000488683 MYADML2A6NDP7 307 aa12.96□□□□□ -0.34
CLIC4-202ENST00000488683 RALBP11234 206 aa12.96□□□□□ -0.34
CLIC4-202ENST00000488683 CNTFP26441 200 aa12.96□□□□□ -0.34
CLIC4-202ENST00000488683 NOS2P35228 1153 aa12.96□□□□□ -0.34
CLIC4-202ENST00000488683 CPOXP36551 454 aa12.96□□□□□ -0.34
CLIC4-202ENST00000488683 MFSD10Q14728 455 aa12.96□□□□□ -0.34
CLIC4-202ENST00000488683 TMEM198Q66K66 360 aa12.96□□□□□ -0.34
CLIC4-202ENST00000488683 RWDD4Q6NW29 188 aaKnown RBP12.96□□□□□ -0.34
CLIC4-202ENST00000488683 FRMD7Q6ZUT3 714 aa12.96□□□□□ -0.34
CLIC4-202ENST00000488683 USP50Q70EL3 339 aaPredicted RBP12.96□□□□□ -0.34
CLIC4-202ENST00000488683 TNIP3Q96KP6 325 aa12.96□□□□□ -0.34
CLIC4-202ENST00000488683 APBA2Q99767 749 aa12.96□□□□□ -0.34
CLIC4-202ENST00000488683 EIF2B3Q9NR50 452 aaKnown RBP12.96□□□□□ -0.34
CLIC4-202ENST00000488683 C20orf96Q9NUD7 363 aaPredicted RBP12.96□□□□□ -0.34
CLIC4-202ENST00000488683 NDFIP2Q9NV92 336 aa12.96□□□□□ -0.34
CLIC4-202ENST00000488683 COPG2Q9UBF2 871 aa12.96□□□□□ -0.34
CLIC4-202ENST00000488683 STOML1Q9UBI4 398 aa12.96□□□□□ -0.34
CLIC4-202ENST00000488683 GLRA3O75311 464 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 LMNAP02545 664 aaKnown RBP12.95□□□□□ -0.34
CLIC4-202ENST00000488683 SERPINA6P08185 405 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 ANPEPP15144 967 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 CYP2B6P20813 491 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 MPSTP25325 297 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 TPI1P60174 286 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 ADAM17P78536 824 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 PAFAH1B3Q15102 231 aaKnown RBP12.95□□□□□ -0.34
CLIC4-202ENST00000488683 SV2CQ496J9 727 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 IZUMO2Q6UXV1 221 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 TLK2Q86UE8 772 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 SCAMP5Q8TAC9 235 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 CDKL2Q92772 493 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 FTHL17Q9BXU8 183 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 TKTL2Q9H0I9 626 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 WDR6Q9NNW5 1121 aaKnown RBP12.95□□□□□ -0.34
CLIC4-202ENST00000488683 VANGL2Q9ULK5 521 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 AK5Q9Y6K8 562 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 A0A096LPK6 155 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 TMEM233B4DJY2 109 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 DFFAO00273 331 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 MSI1O43347 362 aaKnown RBP12.95□□□□□ -0.34
CLIC4-202ENST00000488683 WARSP23381 471 aaKnown RBP12.95□□□□□ -0.34
CLIC4-202ENST00000488683 EPHA3P29320 983 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 ADRA1BP35368 520 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 RAP1GDS1P52306 607 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 CTBP1Q13363 440 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 CUL3Q13618 768 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 POU6F1Q14863 301 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 PDK1Q15118 436 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 RABGAP1LQ5R372 815 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 PDPK2PQ6A1A2 396 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 IQSEC1Q6DN90 963 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 WDR75Q8IWA0 830 aaKnown RBP12.95□□□□□ -0.34
CLIC4-202ENST00000488683 DENND6AQ8IWF6 608 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 SLC26A7Q8TE54 656 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 SENP8Q96LD8 212 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 SLC2A13Q96QE2 648 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 COG4Q9H9E3 785 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 GNEQ9Y223 722 aaKnown RBP12.95□□□□□ -0.34
CLIC4-202ENST00000488683 APOBEC2Q9Y235 224 aaKnown RBP12.95□□□□□ -0.34
CLIC4-202ENST00000488683 INPP5FQ9Y2H2 1132 aa12.95□□□□□ -0.34
CLIC4-202ENST00000488683 ZCWPW2A0A1B0GU75 182 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 CCL22O00626 93 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 TM7SF2O76062 418 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 POLBP06746 335 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 CPA3P15088 417 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 PNPLA4P41247 253 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 CXCR3P49682 368 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 CACNB2Q08289 660 aaPredicted RBP12.94□□□□□ -0.34
CLIC4-202ENST00000488683 TSNAXIP1Q2TAA8 658 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 THEMIS2Q5TEJ8 643 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 CCNJLQ8IV13 435 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 DEFB107AQ8IZN7 70 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 ACMSDQ8TDX5 336 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 ZC3H15Q8WU90 426 aaKnown RBP12.94□□□□□ -0.34
CLIC4-202ENST00000488683 GTF3C2Q8WUA4 911 aaPredicted RBP12.94□□□□□ -0.34
CLIC4-202ENST00000488683 RNF34Q969K3 372 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 FAM136AQ96C01 138 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 ANKRD27Q96NW4 1050 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 IGSF9Q9P2J2 1179 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 SLC2A6Q9UGQ3 507 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 ZNF236Q9UL36 1845 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 ZNF195O14628 629 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 MAGEC1O60732 1142 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 POMCP01189 267 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 BRCC3P46736 316 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 SCNN1GP51170 649 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 ABCE1P61221 599 aaKnown RBP12.94□□□□□ -0.34
CLIC4-202ENST00000488683 MPP1Q00013 466 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 GRM3Q14832 879 aa12.94□□□□□ -0.34
CLIC4-202ENST00000488683 PSTKQ8IV42 348 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms