RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 SORCS1Q8WY21 1168 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 TTC17Q96AE7 1141 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 MAGEH1Q9H213 219 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 PCDH18Q9HCL0 1135 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 ATP13A1Q9HD20 1204 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 ZDHHC4Q9NPG8 344 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 KLHL11Q9NVR0 708 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 RCOR3Q9P2K3 495 aaPredicted RBP16.14■□□□□ 0.17
C9orf3-219ENST00000488186 THAP10Q9P2Z0 257 aaPredicted RBP16.14■□□□□ 0.17
C9orf3-219ENST00000488186 TRIM10Q9UDY6 481 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 FBXO4Q9UKT5 387 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 AMFRQ9UKV5 643 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 PPP2R2CQ9Y2T4 447 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 FANCMQ8IYD8 2048 aa16.14■□□□□ 0.17
C9orf3-219ENST00000488186 LRRD1A4D1F6 860 aa16.13■□□□□ 0.17
C9orf3-219ENST00000488186 WASH4PA8MWX3 477 aa16.13■□□□□ 0.17
C9orf3-219ENST00000488186 ZSCAN12O43309 604 aa16.13■□□□□ 0.17
C9orf3-219ENST00000488186 PSTPIP1O43586 416 aa16.13■□□□□ 0.17
C9orf3-219ENST00000488186 SYNCRIPO60506 623 aaKnown RBP16.13■□□□□ 0.17
C9orf3-219ENST00000488186 PALMO75781 387 aa16.13■□□□□ 0.17
C9orf3-219ENST00000488186 KRT1P04264 644 aa16.13■□□□□ 0.17
C9orf3-219ENST00000488186 AMPD1P23109 780 aa16.13■□□□□ 0.17
C9orf3-219ENST00000488186 STARD3Q14849 445 aa16.13■□□□□ 0.17
C9orf3-219ENST00000488186 ZNF528Q3MIS6 628 aa16.13■□□□□ 0.17
C9orf3-219ENST00000488186 TMEM215Q68D42 235 aa16.13■□□□□ 0.17
C9orf3-219ENST00000488186 PEX26Q7Z412 305 aa16.13■□□□□ 0.17
C9orf3-219ENST00000488186 IL17RCQ8NAC3 791 aa16.13■□□□□ 0.17
C9orf3-219ENST00000488186 OR7D4Q8NG98 312 aa16.13■□□□□ 0.17
C9orf3-219ENST00000488186 LMLNQ96KR4 655 aa16.13■□□□□ 0.17
C9orf3-219ENST00000488186 GOLPH3Q9H4A6 298 aa16.13■□□□□ 0.17
C9orf3-219ENST00000488186 CACNA2D2Q9NY47 1150 aa16.13■□□□□ 0.17
C9orf3-219ENST00000488186 INTS6Q9UL03 887 aaKnown RBP16.13■□□□□ 0.17
C9orf3-219ENST00000488186 MMP17Q9ULZ9 603 aa16.13■□□□□ 0.17
C9orf3-219ENST00000488186 ERVW-1Q9UQF0 538 aa16.13■□□□□ 0.17
C9orf3-219ENST00000488186 A0A0D9SEW6 157 aa16.12■□□□□ 0.17
C9orf3-219ENST00000488186 A0A0U1RQJ8 604 aa16.12■□□□□ 0.17
C9orf3-219ENST00000488186 CBX4O00257 560 aa16.12■□□□□ 0.17
C9orf3-219ENST00000488186 SRPRAP08240 638 aaKnown RBP16.12■□□□□ 0.17
C9orf3-219ENST00000488186 HOXB2P14652 356 aa16.12■□□□□ 0.17
C9orf3-219ENST00000488186 KDELR1P24390 212 aa16.12■□□□□ 0.17
C9orf3-219ENST00000488186 HOXA6P31267 233 aa16.12■□□□□ 0.17
C9orf3-219ENST00000488186 YBEYP58557 167 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-219ENST00000488186 GAS6Q14393 721 aa16.12■□□□□ 0.17
C9orf3-219ENST00000488186 ZNF234Q14588 700 aa16.12■□□□□ 0.17
C9orf3-219ENST00000488186 ACCSLQ4AC99 568 aa16.12■□□□□ 0.17
C9orf3-219ENST00000488186 RETSATQ6NUM9 610 aa16.12■□□□□ 0.17
C9orf3-219ENST00000488186 TMCO3Q6UWJ1 677 aa16.12■□□□□ 0.17
C9orf3-219ENST00000488186 SYT13Q7L8C5 426 aa16.12■□□□□ 0.17
C9orf3-219ENST00000488186 LZTR1Q8N653 840 aa16.12■□□□□ 0.17
C9orf3-219ENST00000488186 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-219ENST00000488186 ATRIPQ8WXE1 791 aa16.12■□□□□ 0.17
C9orf3-219ENST00000488186 RPL10LQ96L21 214 aaKnown RBP16.12■□□□□ 0.17
C9orf3-219ENST00000488186 CSPG4P5Q96PW8 444 aa16.12■□□□□ 0.17
C9orf3-219ENST00000488186 ALS2CR12Q96Q35 445 aa16.12■□□□□ 0.17
C9orf3-219ENST00000488186 FAM126AQ9BYI3 521 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-219ENST00000488186 POLMQ9NP87 494 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-219ENST00000488186 NDFIP2Q9NV92 336 aa16.12■□□□□ 0.17
C9orf3-219ENST00000488186 SUN2Q9UH99 717 aa16.12■□□□□ 0.17
C9orf3-219ENST00000488186 STON1Q9Y6Q2 735 aa16.12■□□□□ 0.17
C9orf3-219ENST00000488186 ATG2BQ96BY7 2078 aa16.12■□□□□ 0.17
C9orf3-219ENST00000488186 GRID2IPA4D2P6 1211 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 ANTXRLA6NF34 631 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 ARHGAP42A6NI28 874 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 WASH3PC4AMC7 463 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 SGK1O00141 431 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 ALDH1A2O94788 518 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 EPHX1P07099 455 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 CD48P09326 243 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 ACVRL1P37023 503 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 CETN2P41208 172 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 CTSOP43234 321 aaPredicted RBP16.11■□□□□ 0.17
C9orf3-219ENST00000488186 DGKEP52429 567 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 NDST2P52849 883 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 SATB1Q01826 763 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 CSTF1Q05048 431 aaKnown RBP16.11■□□□□ 0.17
C9orf3-219ENST00000488186 TCF15Q12870 199 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 MMRN1Q13201 1228 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 DPYSQ14117 519 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 DPYSL3Q14195 570 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 PARP15Q460N3 678 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 ANKRD20A8PQ5CZ79 823 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 ARTNQ5T4W7 220 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 PKN3Q6P5Z2 889 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 CCDC50Q8IVM0 306 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 RCOR2Q8IZ40 523 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 UBL4BQ8N7F7 174 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 ATP11CQ8NB49 1132 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 PRSS33Q8NF86 280 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 OR52K2Q8NGK3 314 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 RAPGEF5Q92565 580 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 NELL1Q92832 810 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 RNF25Q96BH1 459 aaPredicted RBP16.11■□□□□ 0.17
C9orf3-219ENST00000488186 CELF6Q96J87 481 aaKnown RBP16.11■□□□□ 0.17
C9orf3-219ENST00000488186 ACOX2Q99424 681 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 ZNF670Q9BS34 389 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 KCNF1Q9H3M0 494 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 PRMT8Q9NR22 394 aaPredicted RBP16.11■□□□□ 0.17
C9orf3-219ENST00000488186 ZNF212Q9UDV6 495 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 NEU3Q9UQ49 428 aa16.11■□□□□ 0.17
C9orf3-219ENST00000488186 CCDC66A2RUB6 948 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms