RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 RFX4Q33E94 735 aa8.4□□□□□ -1.07
MCF2L2-212ENST00000488149 ZIK1Q3SY52 487 aaPredicted RBP8.4□□□□□ -1.07
MCF2L2-212ENST00000488149 FITM2Q8N6M3 262 aa8.4□□□□□ -1.07
MCF2L2-212ENST00000488149 TAAR1Q96RJ0 339 aa8.4□□□□□ -1.07
MCF2L2-212ENST00000488149 BARX2Q9UMQ3 279 aaPredicted RBP8.4□□□□□ -1.07
MCF2L2-212ENST00000488149 BTN3A3O00478 584 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 ALOX15BO15296 676 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 KCNH1O95259 989 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 RBL1P28749 1068 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 STX4Q12846 297 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 SPIDRQ14159 915 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 FAM187BQ17R55 369 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 ECHDC2Q86YB7 292 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 RASGEF1CQ8N431 466 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 FAM47BQ8NA70 645 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 UXS1Q8NBZ7 420 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 ADGRE3Q9BY15 652 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 IL22Q9GZX6 179 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 TRNAU1APQ9NX07 287 aaKnown RBP8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 GABRB2P47870 512 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 ST8SIA6P61647 398 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 SHROOM1Q2M3G4 852 aaPredicted RBP8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 ILDR2Q71H61 639 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 PIWIL4Q7Z3Z4 852 aaKnown RBP8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 ARL10Q8N8L6 244 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 BTBD9Q96Q07 612 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 LEF1Q9UJU2 399 aaPredicted RBP8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 GMPPBQ9Y5P6 360 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 FSCN2O14926 492 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 EPHB6O15197 1021 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 KLRC4O43908 158 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 RTN3O95197 1032 aaPredicted RBP8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 PAEPP09466 180 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 RAP1GAPP47736 663 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 RAB25P57735 213 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 GRIK3Q13003 919 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 NFIXQ14938 502 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 ZNF544Q6NX49 715 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 POLNQ7Z5Q5 900 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 FAM151AQ8WW52 585 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 STARD8Q92502 1023 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 KATNAL1Q9BW62 490 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 ING3Q9NXR8 418 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 TAS2R14Q9NYV8 317 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 PADI4Q9UM07 663 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 RGS14O43566 566 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 NTSR2O95665 410 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 ERVK-10P10266 1014 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 DBTP11182 482 aaKnown RBP8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 ZNF177Q13360 481 aaPredicted RBP8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 ZNF284Q2VY69 593 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 CES3Q6UWW8 571 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 DNAJC14Q6Y2X3 702 aaPredicted RBP8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 PDPRQ8NCN5 879 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 ZNF540Q8NDQ6 660 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 CHST13Q8NET6 341 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 RDH11Q8TC12 318 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 RCN3Q96D15 328 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 NT5MQ9NPB1 228 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 ATP6V1HQ9UI12 483 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 ZNF180Q9UJW8 692 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 RRN3P2A6NIE6 340 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 PRR5-ARHGAP8B1AHC4 643 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 SEC22BO75396 215 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 ODC1P11926 461 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 NPR3P17342 541 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 TPH1P17752 444 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 S100A3P33764 101 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 SLC11A2P49281 568 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 PLK1P53350 603 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 USP46P62068 366 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 ARHGAP8P85298 464 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 AMHR2Q16671 573 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 EGFLAMQ63HQ2 1017 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 LPCAT4Q643R3 524 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 FBXO30Q8TB52 745 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 SPIRE2Q8WWL2 714 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 GMCL1Q96IK5 515 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 OSBPL6Q9BZF3 934 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 DENND2DQ9H6A0 471 aaPredicted RBP8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 KLHL28Q9NXS3 571 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 TMEM216Q9P0N5 145 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 TCRBV5S4A2TA0A5A2 114 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 RBAK-RBAKDNI3L0D1 243 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 NADKO95544 446 aaPredicted RBP8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 FAM86B2P0C5J1 330 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 ZNF12P17014 697 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 ATP5F1P24539 256 aaPredicted RBP8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 TCF7P36402 384 aaPredicted RBP8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 NAA20P61599 178 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 LSM3P62310 102 aaKnown RBP8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 LNX1Q8TBB1 728 aaPredicted RBP8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 MYLPFQ96A32 169 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 CDHR5Q9HBB8 845 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 SCUBE2Q9NQ36 999 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 MIEF1Q9NQG6 463 aa8.39□□□□□ -1.07
MCF2L2-212ENST00000488149 BCLAF3A2AJT9 711 aaKnown RBP8.38□□□□□ -1.07
MCF2L2-212ENST00000488149 F8VP50 259 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms