RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 BCLAF3A2AJT9 711 aaKnown RBP11.31□□□□□ -0.6
HDLBP-242ENST00000488013 RASA4BC9J798 803 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 NEDD8-MDP1E9PL57 170 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 H7C0C1 242 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 PDE2AO00408 941 aaPredicted RBP11.31□□□□□ -0.6
HDLBP-242ENST00000488013 RASA4O43374 803 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 CNTN5O94779 1100 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 SLU7O95391 586 aaKnown RBP11.31□□□□□ -0.6
HDLBP-242ENST00000488013 CYP17A1P05093 508 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 CCNCP24863 283 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 GARSP41250 739 aaKnown RBP11.31□□□□□ -0.6
HDLBP-242ENST00000488013 ATP5OP48047 213 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 RENBPP51606 427 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 GBE1Q04446 702 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 PPIDQ08752 370 aaKnown RBP11.31□□□□□ -0.6
HDLBP-242ENST00000488013 LLGL1Q15334 1064 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 SIX1Q15475 284 aaPredicted RBP11.31□□□□□ -0.6
HDLBP-242ENST00000488013 SLC45A4Q5BKX6 768 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 ARTNQ5T4W7 220 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 HEATR6Q6AI08 1181 aaKnown RBP11.31□□□□□ -0.6
HDLBP-242ENST00000488013 DARS2Q6PI48 645 aaKnown RBP11.31□□□□□ -0.6
HDLBP-242ENST00000488013 ADHFE1Q8IWW8 467 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 CCDC105Q8IYK2 499 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 AHI1Q8N157 1196 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.31□□□□□ -0.6
HDLBP-242ENST00000488013 DCAF4L2Q8NA75 395 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 CCNYQ8ND76 341 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 RSAD2Q8WXG1 361 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 QKIQ96PU8 341 aaKnown RBP eCLIP11.31□□□□□ -0.6
HDLBP-242ENST00000488013 KXD1Q9BQD3 176 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 KLC2Q9H0B6 622 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 MUC3BQ9H195 1237 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 C8orf33Q9H7E9 229 aaPredicted RBP11.31□□□□□ -0.6
HDLBP-242ENST00000488013 KCNK12Q9HB15 430 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 DEC1Q9P2X7 70 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 PCYOX1Q9UHG3 505 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 AMACRQ9UHK6 382 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 IPO11Q9UI26 975 aaKnown RBP11.31□□□□□ -0.6
HDLBP-242ENST00000488013 FBXO10Q9UK96 956 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 SLC27A6Q9Y2P4 619 aa11.31□□□□□ -0.6
HDLBP-242ENST00000488013 TCRBV7S2A1N4TA0A589 114 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 FAM187AA6NFU0 413 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 EFCAB8A8MWE9 144 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 DFFAO00273 331 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 TRDMT1O14717 391 aaKnown RBP11.3□□□□□ -0.6
HDLBP-242ENST00000488013 SCAMP3O14828 347 aaKnown RBP11.3□□□□□ -0.6
HDLBP-242ENST00000488013 KDELR3O43731 214 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 MFSD11O43934 449 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 NEBLO76041 1014 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 ECEL1O95672 775 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 ATP5BP06576 529 aaKnown RBP11.3□□□□□ -0.6
HDLBP-242ENST00000488013 TUBBP07437 444 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 COILP38432 576 aaPredicted RBP11.3□□□□□ -0.6
HDLBP-242ENST00000488013 HSPA9P38646 679 aaKnown RBP11.3□□□□□ -0.6
HDLBP-242ENST00000488013 PAPOLAP51003 745 aaKnown RBP11.3□□□□□ -0.6
HDLBP-242ENST00000488013 IL10RBQ08334 325 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 ADCY2Q08462 1091 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 SERINC3Q13530 473 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 HNRNPDQ14103 355 aaKnown RBP11.3□□□□□ -0.6
HDLBP-242ENST00000488013 EIF4HQ15056 248 aaKnown RBP11.3□□□□□ -0.6
HDLBP-242ENST00000488013 IL31Q6EBC2 164 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 CXorf57Q6NSI4 855 aaKnown RBP11.3□□□□□ -0.6
HDLBP-242ENST00000488013 CCDC137Q6PK04 289 aaKnown RBP11.3□□□□□ -0.6
HDLBP-242ENST00000488013 GSTA5Q7RTV2 222 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 ADAT2Q7Z6V5 191 aaKnown RBP11.3□□□□□ -0.6
HDLBP-242ENST00000488013 ZNF354CQ86Y25 554 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 CCDC13Q8IYE1 715 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 MMGT1Q8N4V1 131 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 NPWQ8N729 165 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 CCDC89Q8N998 374 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 RIN3Q8TB24 985 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 C1orf54Q8WWF1 131 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 ARHGEF2Q92974 986 aaKnown RBP11.3□□□□□ -0.6
HDLBP-242ENST00000488013 FEM1AQ9BSK4 669 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 CARD6Q9BX69 1037 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 ACE2Q9BYF1 805 aaPredicted RBP11.3□□□□□ -0.6
HDLBP-242ENST00000488013 SLC39A8Q9C0K1 460 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 EBF3Q9H4W6 596 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 SP110Q9HB58 689 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 ATP13A1Q9HD20 1204 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 ETNK2Q9NVF9 386 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 LIMD1Q9UGP4 676 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 VPS28Q9UK41 221 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 TRHDEQ9UKU6 1024 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 SLC8A2Q9UPR5 921 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 GREB1Q4ZG55 1949 aa11.3□□□□□ -0.6
HDLBP-242ENST00000488013 LOC730098B7Z3J9 87 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 NPC1O15118 1278 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 MATN3O15232 486 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 OPHN1O60890 802 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 ASLP04424 464 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 PABPC1P11940 636 aaKnown RBP11.29□□□□□ -0.6
HDLBP-242ENST00000488013 PECAM1P16284 738 aaPredicted RBP11.29□□□□□ -0.6
HDLBP-242ENST00000488013 CES1P23141 567 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 NNMTP40261 264 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 DGKGP49619 791 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 DR1Q01658 176 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 AP1B1Q10567 949 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 SLC10A2Q12908 348 aaPredicted RBP11.29□□□□□ -0.6
HDLBP-242ENST00000488013 TDGQ13569 410 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms