RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 EP300Q09472 2414 aaPredicted RBP18.67■□□□□ 0.58
COL1A1-207ENST00000486572 IGHV1OR15-9A0A0B4J2B8 117 aa18.67■□□□□ 0.58
COL1A1-207ENST00000486572 A0A0D9SEW6 157 aa18.67■□□□□ 0.58
COL1A1-207ENST00000486572 EDDM13A0A1B0GTR0 161 aa18.67■□□□□ 0.58
COL1A1-207ENST00000486572 ILVBLA1L0T0 632 aa18.67■□□□□ 0.58
COL1A1-207ENST00000486572 TTC34A8MYJ7 566 aa18.67■□□□□ 0.58
COL1A1-207ENST00000486572 MAP3K13O43283 966 aa18.67■□□□□ 0.58
COL1A1-207ENST00000486572 AKR1B10O60218 316 aa18.67■□□□□ 0.58
COL1A1-207ENST00000486572 EPN2O95208 641 aa18.67■□□□□ 0.58
COL1A1-207ENST00000486572 MAPKAPK2P49137 400 aa18.67■□□□□ 0.58
COL1A1-207ENST00000486572 VASPP50552 380 aaPredicted RBP18.67■□□□□ 0.58
COL1A1-207ENST00000486572 GALCP54803 685 aa18.67■□□□□ 0.58
COL1A1-207ENST00000486572 KRT83P78385 493 aa18.67■□□□□ 0.58
COL1A1-207ENST00000486572 NLRP14Q86W24 1093 aa18.67■□□□□ 0.58
COL1A1-207ENST00000486572 ARFGAP1Q8N6T3 406 aa18.67■□□□□ 0.58
COL1A1-207ENST00000486572 ARHGEF26Q96DR7 871 aa18.67■□□□□ 0.58
COL1A1-207ENST00000486572 PSMB7Q99436 277 aa18.67■□□□□ 0.58
COL1A1-207ENST00000486572 EPAS1Q99814 870 aa18.67■□□□□ 0.58
COL1A1-207ENST00000486572 NCAPGQ9BPX3 1015 aa18.67■□□□□ 0.58
COL1A1-207ENST00000486572 NUP85Q9BW27 656 aa18.67■□□□□ 0.58
COL1A1-207ENST00000486572 MTG2Q9H4K7 406 aa18.67■□□□□ 0.58
COL1A1-207ENST00000486572 TMEM248Q9NWD8 314 aa18.67■□□□□ 0.58
COL1A1-207ENST00000486572 USP36Q9P275 1121 aaKnown RBP18.67■□□□□ 0.58
COL1A1-207ENST00000486572 AP4E1Q9UPM8 1137 aa18.67■□□□□ 0.58
COL1A1-207ENST00000486572 SPAG17Q6Q759 2223 aa18.67■□□□□ 0.58
COL1A1-207ENST00000486572 TARSL2A2RTX5 802 aaKnown RBP18.66■□□□□ 0.58
COL1A1-207ENST00000486572 PRPSAP2O60256 369 aa18.66■□□□□ 0.58
COL1A1-207ENST00000486572 LRP3O75074 770 aa18.66■□□□□ 0.58
COL1A1-207ENST00000486572 SIN3BO75182 1162 aa18.66■□□□□ 0.58
COL1A1-207ENST00000486572 LRCH4O75427 683 aa18.66■□□□□ 0.58
COL1A1-207ENST00000486572 C7P10643 843 aa18.66■□□□□ 0.58
COL1A1-207ENST00000486572 ACADMP11310 421 aa18.66■□□□□ 0.58
COL1A1-207ENST00000486572 EPHB2P29323 1055 aa18.66■□□□□ 0.58
COL1A1-207ENST00000486572 MIPP30301 263 aa18.66■□□□□ 0.58
COL1A1-207ENST00000486572 GNA12Q03113 381 aa18.66■□□□□ 0.58
COL1A1-207ENST00000486572 SEMA3BQ13214 749 aa18.66■□□□□ 0.58
COL1A1-207ENST00000486572 ACAP1Q15027 740 aa18.66■□□□□ 0.58
COL1A1-207ENST00000486572 SLC36A4Q6YBV0 504 aa18.66■□□□□ 0.58
COL1A1-207ENST00000486572 LPCAT2Q7L5N7 544 aa18.66■□□□□ 0.58
COL1A1-207ENST00000486572 CCDC42Q96M95 316 aa18.66■□□□□ 0.58
COL1A1-207ENST00000486572 PEBP4Q96S96 227 aa18.66■□□□□ 0.58
COL1A1-207ENST00000486572 CHP1Q99653 195 aa18.66■□□□□ 0.58
COL1A1-207ENST00000486572 NHEJ1Q9H9Q4 299 aaPredicted RBP18.66■□□□□ 0.58
COL1A1-207ENST00000486572 CD93Q9NPY3 652 aa18.66■□□□□ 0.58
COL1A1-207ENST00000486572 ITM2CQ9NQX7 267 aa18.66■□□□□ 0.58
COL1A1-207ENST00000486572 PCSK1NQ9UHG2 260 aa18.66■□□□□ 0.58
COL1A1-207ENST00000486572 VPS51Q9UID3 782 aa18.66■□□□□ 0.58
COL1A1-207ENST00000486572 ANAPC7Q9UJX3 599 aa18.66■□□□□ 0.58
COL1A1-207ENST00000486572 PCDHGA5Q9Y5G8 931 aa18.66■□□□□ 0.58
COL1A1-207ENST00000486572 ZNF292O60281 2723 aa18.66■□□□□ 0.58
COL1A1-207ENST00000486572 EIF3CLB5ME19 914 aaKnown RBP18.65■□□□□ 0.58
COL1A1-207ENST00000486572 CREB3O43889 395 aa18.65■□□□□ 0.58
COL1A1-207ENST00000486572 SNAP91O60641 907 aa18.65■□□□□ 0.58
COL1A1-207ENST00000486572 HTR7P34969 479 aa18.65■□□□□ 0.58
COL1A1-207ENST00000486572 PCK1P35558 622 aa18.65■□□□□ 0.58
COL1A1-207ENST00000486572 ETFBP38117 255 aa18.65■□□□□ 0.58
COL1A1-207ENST00000486572 TPMTP51580 245 aa18.65■□□□□ 0.58
COL1A1-207ENST00000486572 RPL6Q02878 288 aaKnown RBP18.65■□□□□ 0.58
COL1A1-207ENST00000486572 ZBTB16Q05516 673 aa18.65■□□□□ 0.58
COL1A1-207ENST00000486572 PIGHQ14442 188 aaPredicted RBP18.65■□□□□ 0.58
COL1A1-207ENST00000486572 SPDYCQ5MJ68 293 aa18.65■□□□□ 0.58
COL1A1-207ENST00000486572 ERMARDQ5T6L9 678 aa18.65■□□□□ 0.58
COL1A1-207ENST00000486572 C9orf64Q5T6V5 341 aa18.65■□□□□ 0.58
COL1A1-207ENST00000486572 ZNF776Q68DI1 518 aaPredicted RBP18.65■□□□□ 0.58
COL1A1-207ENST00000486572 GPR161Q8N6U8 529 aaKnown RBP18.65■□□□□ 0.58
COL1A1-207ENST00000486572 TC2NQ8N9U0 490 aa18.65■□□□□ 0.58
COL1A1-207ENST00000486572 OR7D4Q8NG98 312 aa18.65■□□□□ 0.58
COL1A1-207ENST00000486572 CTNNBL1Q8WYA6 563 aaPredicted RBP18.65■□□□□ 0.58
COL1A1-207ENST00000486572 EIF3CQ99613 913 aaKnown RBP18.65■□□□□ 0.58
COL1A1-207ENST00000486572 ANP32EQ9BTT0 268 aa18.65■□□□□ 0.58
COL1A1-207ENST00000486572 SNRNP25Q9BV90 132 aaKnown RBP18.65■□□□□ 0.58
COL1A1-207ENST00000486572 RSPH9Q9H1X1 276 aaPredicted RBP18.65■□□□□ 0.58
COL1A1-207ENST00000486572 ATP13A1Q9HD20 1204 aa18.65■□□□□ 0.58
COL1A1-207ENST00000486572 NDFIP2Q9NV92 336 aa18.65■□□□□ 0.58
COL1A1-207ENST00000486572 GPATCH2LQ9NWQ4 482 aa18.65■□□□□ 0.58
COL1A1-207ENST00000486572 IP6K2Q9UHH9 426 aa18.65■□□□□ 0.58
COL1A1-207ENST00000486572 DNAI1Q9UI46 699 aa18.65■□□□□ 0.58
COL1A1-207ENST00000486572 USP18Q9UMW8 372 aa18.65■□□□□ 0.58
COL1A1-207ENST00000486572 HS3ST2Q9Y278 367 aa18.65■□□□□ 0.58
COL1A1-207ENST00000486572 WDR87Q6ZQQ6 2873 aa18.65■□□□□ 0.58
COL1A1-207ENST00000486572 FRYLO94915 3013 aa18.64■□□□□ 0.57
COL1A1-207ENST00000486572 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.64■□□□□ 0.57
COL1A1-207ENST00000486572 ATP9BO43861 1147 aa18.64■□□□□ 0.57
COL1A1-207ENST00000486572 RNASEH1O60930 286 aaKnown RBP18.64■□□□□ 0.57
COL1A1-207ENST00000486572 IGLV3-19P01714 112 aa18.64■□□□□ 0.57
COL1A1-207ENST00000486572 DNTTP04053 509 aa18.64■□□□□ 0.57
COL1A1-207ENST00000486572 H2AFZP0C0S5 128 aa18.64■□□□□ 0.57
COL1A1-207ENST00000486572 CD6P30203 668 aa18.64■□□□□ 0.57
COL1A1-207ENST00000486572 DHPSP49366 369 aaPredicted RBP18.64■□□□□ 0.57
COL1A1-207ENST00000486572 TPI1P60174 286 aa18.64■□□□□ 0.57
COL1A1-207ENST00000486572 RPS14P62263 151 aaKnown RBP18.64■□□□□ 0.57
COL1A1-207ENST00000486572 SPEM2Q0P670 501 aa18.64■□□□□ 0.57
COL1A1-207ENST00000486572 CYP4V2Q6ZWL3 525 aaPredicted RBP18.64■□□□□ 0.57
COL1A1-207ENST00000486572 H2AFVQ71UI9 128 aa18.64■□□□□ 0.57
COL1A1-207ENST00000486572 PSTKQ8IV42 348 aaKnown RBP18.64■□□□□ 0.57
COL1A1-207ENST00000486572 TMEFF1Q8IYR6 380 aa18.64■□□□□ 0.57
COL1A1-207ENST00000486572 SH2D3CQ8N5H7 860 aa18.64■□□□□ 0.57
COL1A1-207ENST00000486572 NIPA2Q8N8Q9 360 aa18.64■□□□□ 0.57
COL1A1-207ENST00000486572 RTL3Q8N8U3 475 aaKnown RBP18.64■□□□□ 0.57
COL1A1-207ENST00000486572 FRS2Q8WU20 508 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms