RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 GSCP56915 257 aaPredicted RBP13.24□□□□□ -0.29
CHMP3-208ENST00000486404 ELAVL3Q14576 367 aaKnown RBP13.24□□□□□ -0.29
CHMP3-208ENST00000486404 ARID5BQ14865 1188 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 CST6Q15828 149 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 ALFQ53S48 1182 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 SFMBT2Q5VUG0 894 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 DCUN1D2Q6PH85 259 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 MON1BQ7L1V2 547 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 LUZP1Q86V48 1076 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 MMAAQ8IVH4 418 aaKnown RBP13.24□□□□□ -0.29
CHMP3-208ENST00000486404 HDDC3Q8N4P3 179 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 JOSD2Q8TAC2 188 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 CCDC114Q96M63 670 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 MCEEQ96PE7 176 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 HAPLN3Q96S86 360 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 OMDQ99983 421 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 FEM1AQ9BSK4 669 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 ZYG11BQ9C0D3 744 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 ANLNQ9NQW6 1124 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 TMPRSS4Q9NRS4 437 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 MPP6Q9NZW5 540 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 SLCO3A1Q9UIG8 710 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 DNAH14Q0VDD8 3507 aa13.24□□□□□ -0.29
CHMP3-208ENST00000486404 CNOT1A5YKK6 2376 aaKnown RBP13.23□□□□□ -0.29
CHMP3-208ENST00000486404 TMEM131Q92545 1883 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 A0A1B0GTW7 788 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 I6L893 689 aaPredicted RBP13.23□□□□□ -0.29
CHMP3-208ENST00000486404 MID1O15344 667 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 BNIP3LO60238 219 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 FSBPO95073 299 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 ADH1BP00325 375 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 IL1BP01584 269 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 TNFAIP3P21580 790 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 MAOBP27338 520 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 OR1E1P30953 314 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 ACSL1P33121 698 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 IQCB1Q15051 598 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 CCDC14Q49A88 953 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 C5orf22Q49AR2 442 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 C9orf64Q5T6V5 341 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 RWDD4Q6NW29 188 aaKnown RBP13.23□□□□□ -0.29
CHMP3-208ENST00000486404 USP30Q70CQ3 517 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 STRADAQ7RTN6 431 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 SETD3Q86TU7 594 aaPredicted RBP13.23□□□□□ -0.29
CHMP3-208ENST00000486404 STK40Q8N2I9 435 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 DCAF4L2Q8NA75 395 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 OR8D1Q8WZ84 308 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 BAP1Q92560 729 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 C1orf74Q96LT6 269 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 C6orf106Q9H6K1 298 aaPredicted RBP13.23□□□□□ -0.29
CHMP3-208ENST00000486404 SGK2Q9HBY8 427 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 FSCN3Q9NQT6 498 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 FBXL12Q9NXK8 326 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 TBC1D30Q9Y2I9 924 aa13.23□□□□□ -0.29
CHMP3-208ENST00000486404 CHD5Q8TDI0 1954 aa13.22□□□□□ -0.29
CHMP3-208ENST00000486404 A0A1W2PP55 124 aa13.22□□□□□ -0.29
CHMP3-208ENST00000486404 FAM47DPA6NHR8 397 aa13.22□□□□□ -0.29
CHMP3-208ENST00000486404 METTL12A8MUP2 240 aa13.22□□□□□ -0.29
CHMP3-208ENST00000486404 TMCO5BA8MYB1 307 aa13.22□□□□□ -0.29
CHMP3-208ENST00000486404 C1QTNF3-AMACRE9PGA6 284 aa13.22□□□□□ -0.29
CHMP3-208ENST00000486404 SLC8A1P32418 973 aa13.22□□□□□ -0.29
CHMP3-208ENST00000486404 RFC1P35251 1148 aaPredicted RBP13.22□□□□□ -0.29
CHMP3-208ENST00000486404 NOVA1P51513 510 aaKnown RBP13.22□□□□□ -0.29
CHMP3-208ENST00000486404 KLHL30Q0D2K2 578 aa13.22□□□□□ -0.29
CHMP3-208ENST00000486404 PTP4A2Q12974 167 aa13.22□□□□□ -0.29
CHMP3-208ENST00000486404 SKOR2Q2VWA4 1001 aaPredicted RBP13.22□□□□□ -0.29
CHMP3-208ENST00000486404 ZSCAN23Q3MJ62 389 aa13.22□□□□□ -0.29
CHMP3-208ENST00000486404 EFHC2Q5JST6 749 aa13.22□□□□□ -0.29
CHMP3-208ENST00000486404 ACAD10Q6JQN1 1059 aa13.22□□□□□ -0.29
CHMP3-208ENST00000486404 Q6ZVU0 165 aa13.22□□□□□ -0.29
CHMP3-208ENST00000486404 BNIPLQ7Z465 357 aa13.22□□□□□ -0.29
CHMP3-208ENST00000486404 DRC7Q8IY82 874 aa13.22□□□□□ -0.29
CHMP3-208ENST00000486404 ZNF683Q8IZ20 524 aa13.22□□□□□ -0.29
CHMP3-208ENST00000486404 ATP11CQ8NB49 1132 aa13.22□□□□□ -0.29
CHMP3-208ENST00000486404 OR52K2Q8NGK3 314 aa13.22□□□□□ -0.29
CHMP3-208ENST00000486404 CAPN10Q9HC96 672 aa13.22□□□□□ -0.29
CHMP3-208ENST00000486404 ATP13A1Q9HD20 1204 aa13.22□□□□□ -0.29
CHMP3-208ENST00000486404 EIF2B4Q9UI10 523 aaKnown RBP13.22□□□□□ -0.29
CHMP3-208ENST00000486404 VPS51Q9UID3 782 aa13.22□□□□□ -0.29
CHMP3-208ENST00000486404 FZD4Q9ULV1 537 aa13.22□□□□□ -0.29
CHMP3-208ENST00000486404 FARP1Q9Y4F1 1045 aaPredicted RBP13.22□□□□□ -0.29
CHMP3-208ENST00000486404 ASCC3Q8N3C0 2202 aaKnown RBP13.22□□□□□ -0.29
CHMP3-208ENST00000486404 IGLV3-10A0A075B6K4 115 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 LRRC72A6NJI9 287 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 SIGLEC16A6NMB1 481 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 DRGXA6NNA5 263 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 CBX4O00257 560 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 ARHGAP33O14559 1287 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 BCAT2O15382 392 aaPredicted RBP13.21□□□□□ -0.29
CHMP3-208ENST00000486404 CCP110O43303 1012 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 OPHN1O60890 802 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 ENDOD1O94919 500 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 TPM3P06753 285 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 VAV1P15498 845 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 C5AR1P21730 350 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 RRM1P23921 792 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 ADRA1BP35368 520 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 ETFBP38117 255 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 RECQLP46063 649 aaPredicted RBP13.21□□□□□ -0.29
CHMP3-208ENST00000486404 FANCCQ00597 558 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms