RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 ANKS1BQ7Z6G8 1248 aa13.3□□□□□ -0.28
SSR4-211ENST00000486204 TMEM139Q8IV31 216 aa13.3□□□□□ -0.28
SSR4-211ENST00000486204 MFN1Q8IWA4 741 aa13.3□□□□□ -0.28
SSR4-211ENST00000486204 CCAR2Q8N163 923 aaKnown RBP13.3□□□□□ -0.28
SSR4-211ENST00000486204 IL17RCQ8NAC3 791 aa13.3□□□□□ -0.28
SSR4-211ENST00000486204 FIBINQ8TAL6 211 aa13.3□□□□□ -0.28
SSR4-211ENST00000486204 PIGKQ92643 395 aa13.3□□□□□ -0.28
SSR4-211ENST00000486204 LRIG1Q96JA1 1093 aa13.3□□□□□ -0.28
SSR4-211ENST00000486204 PEBP4Q96S96 227 aa13.3□□□□□ -0.28
SSR4-211ENST00000486204 NUP85Q9BW27 656 aa13.3□□□□□ -0.28
SSR4-211ENST00000486204 SIK2Q9H0K1 926 aa13.3□□□□□ -0.28
SSR4-211ENST00000486204 ABCB8Q9NUT2 735 aa13.3□□□□□ -0.28
SSR4-211ENST00000486204 ZNF212Q9UDV6 495 aa13.3□□□□□ -0.28
SSR4-211ENST00000486204 INTS6Q9UL03 887 aaKnown RBP13.3□□□□□ -0.28
SSR4-211ENST00000486204 THADAQ6YHU6 1953 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 TYW5A2RUC4 315 aaKnown RBP13.29□□□□□ -0.28
SSR4-211ENST00000486204 DRGXA6NNA5 263 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 E9PAM4 449 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 FAM72CH0Y354 149 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 ADAM23O75077 832 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 LRCH4O75427 683 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 CNTN5O94779 1100 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 H2AFZP0C0S5 128 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 TMEM253P0C7T8 217 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 PABPC1P11940 636 aaKnown RBP13.29□□□□□ -0.28
SSR4-211ENST00000486204 TIE1P35590 1138 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 MAPK8P45983 427 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 DHPSP49366 369 aaPredicted RBP13.29□□□□□ -0.28
SSR4-211ENST00000486204 DGKEP52429 567 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 C19orf57Q0VDD7 668 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 SEMA3BQ13214 749 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 EIF4HQ15056 248 aaKnown RBP13.29□□□□□ -0.28
SSR4-211ENST00000486204 FUT11Q495W5 492 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 USP39Q53GS9 565 aaKnown RBP13.29□□□□□ -0.28
SSR4-211ENST00000486204 ALFQ53S48 1182 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 RABGAP1LQ5R372 815 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 FAM72AQ5TYM5 149 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 FAM72DQ6L9T8 149 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 H2AFVQ71UI9 128 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 SYT13Q7L8C5 426 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 PIP4P1Q86T03 277 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 ADIPOR2Q86V24 386 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 FAM72BQ86X60 149 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 CARNMT1Q8N4J0 409 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 ALLCQ8N6M5 410 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 OR52K2Q8NGK3 314 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 ACDQ96AP0 544 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 BTBD6Q96KE9 485 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 RPRD1AQ96P16 312 aaPredicted RBP13.29□□□□□ -0.28
SSR4-211ENST00000486204 ACOX2Q99424 681 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 NUSAP1Q9BXS6 441 aaKnown RBP13.29□□□□□ -0.28
SSR4-211ENST00000486204 OSBPL2Q9H1P3 480 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 CCDC86Q9H6F5 360 aaKnown RBP13.29□□□□□ -0.28
SSR4-211ENST00000486204 CACNA2D2Q9NY47 1150 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 IMPACTQ9P2X3 320 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 EVLQ9UI08 416 aaPredicted RBP13.29□□□□□ -0.28
SSR4-211ENST00000486204 GGA2Q9UJY4 613 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 MMP17Q9ULZ9 603 aa13.29□□□□□ -0.28
SSR4-211ENST00000486204 SGK1O00141 431 aa13.28□□□□□ -0.28
SSR4-211ENST00000486204 HNRNPLP14866 589 aaKnown RBP eCLIP13.28□□□□□ -0.28
SSR4-211ENST00000486204 AIF1P55008 147 aa13.28□□□□□ -0.28
SSR4-211ENST00000486204 CDH18Q13634 790 aa13.28□□□□□ -0.28
SSR4-211ENST00000486204 ENPP2Q13822 863 aa13.28□□□□□ -0.28
SSR4-211ENST00000486204 DMC1Q14565 340 aa13.28□□□□□ -0.28
SSR4-211ENST00000486204 ZNF423Q2M1K9 1284 aa13.28□□□□□ -0.28
SSR4-211ENST00000486204 ARL13BQ3SXY8 428 aa13.28□□□□□ -0.28
SSR4-211ENST00000486204 HSF5Q4G112 596 aaPredicted RBP13.28□□□□□ -0.28
SSR4-211ENST00000486204 TRIM61Q5EBN2 209 aa13.28□□□□□ -0.28
SSR4-211ENST00000486204 ACBD5Q5T8D3 534 aaPredicted RBP13.28□□□□□ -0.28
SSR4-211ENST00000486204 CHST9Q7L1S5 443 aa13.28□□□□□ -0.28
SSR4-211ENST00000486204 RAB44Q7Z6P3 723 aaPredicted RBP13.28□□□□□ -0.28
SSR4-211ENST00000486204 SLFN11Q7Z7L1 901 aa13.28□□□□□ -0.28
SSR4-211ENST00000486204 AHI1Q8N157 1196 aa13.28□□□□□ -0.28
SSR4-211ENST00000486204 CCDC33Q8N5R6 958 aa13.28□□□□□ -0.28
SSR4-211ENST00000486204 ZNF513Q8N8E2 541 aaPredicted RBP13.28□□□□□ -0.28
SSR4-211ENST00000486204 NIPA2Q8N8Q9 360 aa13.28□□□□□ -0.28
SSR4-211ENST00000486204 ZNF557Q8N988 423 aaPredicted RBP13.28□□□□□ -0.28
SSR4-211ENST00000486204 SPC24Q8NBT2 197 aa13.28□□□□□ -0.28
SSR4-211ENST00000486204 CCDC26Q8TAB7 109 aa13.28□□□□□ -0.28
SSR4-211ENST00000486204 ZNF564Q8TBZ8 553 aaPredicted RBP13.28□□□□□ -0.28
SSR4-211ENST00000486204 KCNV2Q8TDN2 545 aa13.28□□□□□ -0.28
SSR4-211ENST00000486204 WFIKKN2Q8TEU8 576 aa13.28□□□□□ -0.28
SSR4-211ENST00000486204 CTNNBL1Q8WYA6 563 aaPredicted RBP13.28□□□□□ -0.28
SSR4-211ENST00000486204 CD248Q9HCU0 757 aa13.28□□□□□ -0.28
SSR4-211ENST00000486204 ANAPC7Q9UJX3 599 aa13.28□□□□□ -0.28
SSR4-211ENST00000486204 FZD10Q9ULW2 581 aa13.28□□□□□ -0.28
SSR4-211ENST00000486204 SOWAHDA6NJG2 315 aa13.27□□□□□ -0.29
SSR4-211ENST00000486204 CYSRT1A8MQ03 144 aa13.27□□□□□ -0.29
SSR4-211ENST00000486204 UPK3BL1B0FP48 263 aa13.27□□□□□ -0.29
SSR4-211ENST00000486204 UPK3BL2E5RIL1 263 aa13.27□□□□□ -0.29
SSR4-211ENST00000486204 LRIG2O94898 1065 aa13.27□□□□□ -0.29
SSR4-211ENST00000486204 KLF8O95600 359 aaPredicted RBP13.27□□□□□ -0.29
SSR4-211ENST00000486204 TCF4P15884 667 aa13.27□□□□□ -0.29
SSR4-211ENST00000486204 MIPP30301 263 aa13.27□□□□□ -0.29
SSR4-211ENST00000486204 CDH4P55283 916 aa13.27□□□□□ -0.29
SSR4-211ENST00000486204 PTPRNQ16849 979 aa13.27□□□□□ -0.29
SSR4-211ENST00000486204 SCYL2Q6P3W7 929 aa13.27□□□□□ -0.29
SSR4-211ENST00000486204 TMEM92Q6UXU6 159 aa13.27□□□□□ -0.29
SSR4-211ENST00000486204 RAD9BQ6WBX8 426 aa13.27□□□□□ -0.29
SSR4-211ENST00000486204 NUDT18Q6ZVK8 323 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms