RNA–Protein interactions for RNA: ENST00000485758.1

TPRKB-208, Transcript of TP53RK binding protein, human

TSL 2

Gene TPRKB, Length 730 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPRKB-208	ENST00000485758	BCCIP	Q9P287	314 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
TPRKB-208	ENST00000485758	OR12D3	Q9UGF7	316 aa		10.83	□□□□□ -0.68
TPRKB-208	ENST00000485758	PLA2G4C	Q9UP65	541 aa		10.83	□□□□□ -0.68
TPRKB-208	ENST00000485758	SMG5	Q9UPR3	1016 aa	Known RBP	10.83	□□□□□ -0.68
TPRKB-208	ENST00000485758	TBC1D30	Q9Y2I9	924 aa		10.83	□□□□□ -0.68
TPRKB-208	ENST00000485758	NUP205	Q92621	2012 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	FAM72C	H0Y354	149 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	SRGAP2	O75044	1071 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	RPP40	O75818	363 aa	Known RBP	10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	RNF8	O76064	485 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	LMNA	P02545	664 aa	Known RBP	10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	CYP1A2	P05177	515 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	SRPRA	P08240	638 aa	Known RBP	10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	GABRG2	P18507	467 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	ST8SIA6	P61647	398 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	FAM72A	Q5TYM5	149 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	FAM72D	Q6L9T8	149 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	ASCL5	Q7RTU5	278 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	TFAP2D	Q7Z6R9	452 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	FAM72B	Q86X60	149 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	KDM1B	Q8NB78	822 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	SUMF1	Q8NBK3	374 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	TBC1D31	Q96DN5	1066 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	ARHGEF26	Q96DR7	871 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	ALG14	Q96F25	216 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	MRGPRX3	Q96LB0	322 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	PPP1R9B	Q96SB3	815 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	NCAPG	Q9BPX3	1015 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	FEM1A	Q9BSK4	669 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	MAGEB5	Q9BZ81	275 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	ZNF212	Q9UDV6	495 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	FZD10	Q9ULW2	581 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	NEU3	Q9UQ49	428 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	OR51B4	Q9Y5P0	310 aa		10.82	□□□□□ -0.68
TPRKB-208	ENST00000485758	ABCA7	Q8IZY2	2146 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	ZBTB24	O43167	697 aa	Predicted RBP	10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	AKR1B10	O60218	316 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	SYNCRIP	O60506	623 aa	Known RBP	10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	LRCH4	O75427	683 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	LRIG2	O94898	1065 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	EPHX1	P07099	455 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	HLA-E	P13747	358 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	NDUFV2	P19404	249 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	OR1E1	P30953	314 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	L1CAM	P32004	1257 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	CTSO	P43234	321 aa	Predicted RBP	10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	MRE11	P49959	708 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	ECT2L	Q008S8	904 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	SULT2A1	Q06520	285 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	CAMK2G	Q13555	558 aa	Predicted RBP	10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	SIM2	Q14190	667 aa	Predicted RBP	10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	ACAP1	Q15027	740 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	C6orf118	Q5T5N4	469 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	RNF219	Q5W0B1	726 aa	Predicted RBP	10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	CEP68	Q76N32	757 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	SETD3	Q86TU7	594 aa	Predicted RBP	10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	PYROXD2	Q8N2H3	581 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	PGBD3	Q8N328	593 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	ARFGAP1	Q8N6T3	406 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	ZNF366	Q8N895	744 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	NIPA2	Q8N8Q9	360 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	ERLEC1	Q96DZ1	483 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	CCDC42	Q96M95	316 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	PEBP4	Q96S96	227 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	SNRNP25	Q9BV90	132 aa	Known RBP	10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	NUP85	Q9BW27	656 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	PACSIN1	Q9BY11	444 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	RETREG1	Q9H6L5	497 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	SPTLC3	Q9NUV7	552 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	TMEM248	Q9NWD8	314 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	ANAPC7	Q9UJX3	599 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	VPS28	Q9UK41	221 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	RAB23	Q9ULC3	237 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	ERVW-1	Q9UQF0	538 aa		10.81	□□□□□ -0.68
TPRKB-208	ENST00000485758	ILVBL	A1L0T0	632 aa		10.8	□□□□□ -0.68
TPRKB-208	ENST00000485758	H2AFZ	P0C0S5	128 aa		10.8	□□□□□ -0.68
TPRKB-208	ENST00000485758	RHOQ	P17081	205 aa		10.8	□□□□□ -0.68
TPRKB-208	ENST00000485758	MIP	P30301	263 aa		10.8	□□□□□ -0.68
TPRKB-208	ENST00000485758	PCK1	P35558	622 aa		10.8	□□□□□ -0.68
TPRKB-208	ENST00000485758	P2RY2	P41231	377 aa		10.8	□□□□□ -0.68
TPRKB-208	ENST00000485758	MAPKAPK2	P49137	400 aa		10.8	□□□□□ -0.68
TPRKB-208	ENST00000485758	NUMB	P49757	651 aa		10.8	□□□□□ -0.68
TPRKB-208	ENST00000485758	STK19	P49842	368 aa	Predicted RBP	10.8	□□□□□ -0.68
TPRKB-208	ENST00000485758	COPA	P53621	1224 aa		10.8	□□□□□ -0.68
TPRKB-208	ENST00000485758	SEMA3B	Q13214	749 aa		10.8	□□□□□ -0.68
TPRKB-208	ENST00000485758	PIGH	Q14442	188 aa	Predicted RBP	10.8	□□□□□ -0.68
TPRKB-208	ENST00000485758	USP39	Q53GS9	565 aa	Known RBP	10.8	□□□□□ -0.68
TPRKB-208	ENST00000485758	RWDD4	Q6NW29	188 aa	Known RBP	10.8	□□□□□ -0.68
TPRKB-208	ENST00000485758	ZNF783	Q6ZMS7	281 aa		10.8	□□□□□ -0.68
TPRKB-208	ENST00000485758	PRR23B	Q6ZRT6	265 aa		10.8	□□□□□ -0.68
TPRKB-208	ENST00000485758	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	10.8	□□□□□ -0.68
TPRKB-208	ENST00000485758	H2AFV	Q71UI9	128 aa		10.8	□□□□□ -0.68
TPRKB-208	ENST00000485758	ALYREF	Q86V81	257 aa	Known RBP	10.8	□□□□□ -0.68
TPRKB-208	ENST00000485758	C11orf74	Q86VG3	221 aa		10.8	□□□□□ -0.68
TPRKB-208	ENST00000485758	NLRP14	Q86W24	1093 aa		10.8	□□□□□ -0.68
TPRKB-208	ENST00000485758	DCAF4L2	Q8NA75	395 aa		10.8	□□□□□ -0.68
TPRKB-208	ENST00000485758	OR2T3	Q8NH03	318 aa		10.8	□□□□□ -0.68
TPRKB-208	ENST00000485758	ZNF564	Q8TBZ8	553 aa	Predicted RBP	10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms