RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 AADACL2Q6P093 401 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 ARHGAP36Q6ZRI8 547 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.18□□□□□ -0.46
APTX-227ENST00000485479 RTL3Q8N8U3 475 aaKnown RBP12.18□□□□□ -0.46
APTX-227ENST00000485479 HMCESQ96FZ2 354 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 MYO19Q96H55 970 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 CD93Q9NPY3 652 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 TMEM248Q9NWD8 314 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 TRMT1Q9NXH9 659 aaKnown RBP12.18□□□□□ -0.46
APTX-227ENST00000485479 PYCARDQ9ULZ3 195 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 OR51B4Q9Y5P0 310 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 USP27XA6NNY8 438 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 TTC34A8MYJ7 566 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 H0Y858 1186 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 TNFRSF4P43489 277 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 ARSEP51690 589 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 GNA12Q03113 381 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 MTA1Q13330 715 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 DPYSQ14117 519 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 DMC1Q14565 340 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 TCEAL1Q15170 157 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 FBXO43Q4G163 708 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 C6orf118Q5T5N4 469 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 ANO7Q6IWH7 933 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 SERPINA13PQ6UXR4 307 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 KIAA0907Q7Z7F0 614 aaPredicted RBP12.18□□□□□ -0.46
APTX-227ENST00000485479 C1orf210Q8IVY1 113 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 LRRC57Q8N9N7 239 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 EXOC4Q96A65 974 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 ATP13A1Q9HD20 1204 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 VPS51Q9UID3 782 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 STON1Q9Y6Q2 735 aa12.18□□□□□ -0.46
APTX-227ENST00000485479 DFFAO00273 331 aa12.17□□□□□ -0.46
APTX-227ENST00000485479 SMAD6O43541 496 aaKnown RBP12.17□□□□□ -0.46
APTX-227ENST00000485479 RAMP2O60895 175 aa12.17□□□□□ -0.46
APTX-227ENST00000485479 EPHX1P07099 455 aa12.17□□□□□ -0.46
APTX-227ENST00000485479 DLDP09622 509 aaKnown RBP12.17□□□□□ -0.46
APTX-227ENST00000485479 HOXB2P14652 356 aa12.17□□□□□ -0.46
APTX-227ENST00000485479 ARL4AP40617 200 aa12.17□□□□□ -0.46
APTX-227ENST00000485479 HADHBP55084 474 aaKnown RBP12.17□□□□□ -0.46
APTX-227ENST00000485479 DYNLT1P63172 113 aa12.17□□□□□ -0.46
APTX-227ENST00000485479 CSTF1Q05048 431 aaKnown RBP12.17□□□□□ -0.46
APTX-227ENST00000485479 ANGPT1Q15389 498 aa12.17□□□□□ -0.46
APTX-227ENST00000485479 B4GALNT4Q76KP1 1039 aa12.17□□□□□ -0.46
APTX-227ENST00000485479 SETD3Q86TU7 594 aaPredicted RBP12.17□□□□□ -0.46
APTX-227ENST00000485479 TEKT4Q8WW24 435 aa12.17□□□□□ -0.46
APTX-227ENST00000485479 TSC1Q92574 1164 aa12.17□□□□□ -0.46
APTX-227ENST00000485479 MRGPRX3Q96LB0 322 aa12.17□□□□□ -0.46
APTX-227ENST00000485479 TPSD1Q9BZJ3 242 aa12.17□□□□□ -0.46
APTX-227ENST00000485479 CATSPERBQ9H7T0 1116 aa12.17□□□□□ -0.46
APTX-227ENST00000485479 ERVW-1Q9UQF0 538 aa12.17□□□□□ -0.46
APTX-227ENST00000485479 STARD13Q9Y3M8 1113 aa12.17□□□□□ -0.46
APTX-227ENST00000485479 CHD5Q8TDI0 1954 aa12.17□□□□□ -0.46
APTX-227ENST00000485479 A0A1W2PQF6 199 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 TCRBV21S2A2A0A5A6 115 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 C3orf70A6NLC5 250 aaPredicted RBP12.16□□□□□ -0.46
APTX-227ENST00000485479 H3BRJ5 948 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 LAMTOR5O43504 91 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 KRT7P08729 469 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 KRT10P13645 584 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 KDELR1P24390 212 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 NTSR1P30989 418 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 ARF5P84085 180 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 ECT2LQ008S8 904 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 CCDC173Q0VFZ6 552 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 POLD3Q15054 466 aaPredicted RBP12.16□□□□□ -0.46
APTX-227ENST00000485479 CRY1Q16526 586 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 PREPLQ4J6C6 727 aaPredicted RBP12.16□□□□□ -0.46
APTX-227ENST00000485479 KAZNQ674X7 775 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 C11orf63Q6NUN7 778 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 MFSD7Q6UXD7 560 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 NUDT18Q6ZVK8 323 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 RHOT1Q8IXI2 618 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 C17orf53Q8N3J3 647 aaPredicted RBP12.16□□□□□ -0.46
APTX-227ENST00000485479 SPEM1Q8N4L4 309 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 PRSS33Q8NF86 280 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 PCDH19Q8TAB3 1148 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 KIAA1524Q8TCG1 905 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 HMGB4Q8WW32 186 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 ARHGEF2Q92974 986 aaKnown RBP12.16□□□□□ -0.46
APTX-227ENST00000485479 SLC39A8Q9C0K1 460 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 THAP10Q9P2Z0 257 aaPredicted RBP12.16□□□□□ -0.46
APTX-227ENST00000485479 MMP17Q9ULZ9 603 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 PLA2G4CQ9UP65 541 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 SHROOM3Q8TF72 1996 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 BTNL10A8MVZ5 291 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 RASA4BC9J798 803 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 DCLK1O15075 740 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 RASA4O43374 803 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 NRDCO43847 1150 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 MFSD11O43934 449 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 SLC1A1P43005 524 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 CXCL12P48061 93 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 MRPS21P82921 87 aaKnown RBP12.16□□□□□ -0.46
APTX-227ENST00000485479 ADCY2Q08462 1091 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 SRSF5Q13243 272 aaKnown RBP12.16□□□□□ -0.46
APTX-227ENST00000485479 EIF4HQ15056 248 aaKnown RBP12.16□□□□□ -0.46
APTX-227ENST00000485479 ACCSLQ4AC99 568 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 ANKRD20A8PQ5CZ79 823 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 NT5DC3Q86UY8 548 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms