RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 PNKPQ96T60 521 aa18.99■□□□□ 0.63
ERCC2-205ENST00000485403 SLC2A11Q9BYW1 496 aa18.99■□□□□ 0.63
ERCC2-205ENST00000485403 DEC1Q9P2X7 70 aa18.99■□□□□ 0.63
ERCC2-205ENST00000485403 CLEC4EQ9ULY5 219 aa18.99■□□□□ 0.63
ERCC2-205ENST00000485403 NDRG2Q9UN36 371 aaKnown RBP18.99■□□□□ 0.63
ERCC2-205ENST00000485403 R3HDM2Q9Y2K5 976 aaKnown RBP18.99■□□□□ 0.63
ERCC2-205ENST00000485403 SIT1Q9Y3P8 196 aa18.99■□□□□ 0.63
ERCC2-205ENST00000485403 CACNA1HO95180 2353 aa18.99■□□□□ 0.63
ERCC2-205ENST00000485403 WDFY4Q6ZS81 3184 aa18.98■□□□□ 0.63
ERCC2-205ENST00000485403 CCDC188H7C350 402 aa18.98■□□□□ 0.63
ERCC2-205ENST00000485403 ERCC2P18074 760 aa18.98■□□□□ 0.63
ERCC2-205ENST00000485403 TGM2P21980 687 aa18.98■□□□□ 0.63
ERCC2-205ENST00000485403 HOXC13P31276 330 aa18.98■□□□□ 0.63
ERCC2-205ENST00000485403 GRSF1Q12849 480 aaKnown RBP eCLIP18.98■□□□□ 0.63
ERCC2-205ENST00000485403 PLD5Q8N7P1 536 aa18.98■□□□□ 0.63
ERCC2-205ENST00000485403 PRELID2Q8N945 189 aa18.98■□□□□ 0.63
ERCC2-205ENST00000485403 TTC13Q8NBP0 860 aa18.98■□□□□ 0.63
ERCC2-205ENST00000485403 C1orf54Q8WWF1 131 aa18.98■□□□□ 0.63
ERCC2-205ENST00000485403 MAGOHBQ96A72 148 aaKnown RBP18.98■□□□□ 0.63
ERCC2-205ENST00000485403 HAUS1Q96CS2 278 aa18.98■□□□□ 0.63
ERCC2-205ENST00000485403 CATSPERBQ9H7T0 1116 aa18.98■□□□□ 0.63
ERCC2-205ENST00000485403 ETNK2Q9NVF9 386 aa18.98■□□□□ 0.63
ERCC2-205ENST00000485403 DNAJC17Q9NVM6 304 aaKnown RBP18.98■□□□□ 0.63
ERCC2-205ENST00000485403 DLGAP2Q9P1A6 1054 aa18.98■□□□□ 0.63
ERCC2-205ENST00000485403 PPARGC1AQ9UBK2 798 aaKnown RBP18.98■□□□□ 0.63
ERCC2-205ENST00000485403 SLC27A6Q9Y2P4 619 aa18.98■□□□□ 0.63
ERCC2-205ENST00000485403 IGLV3-10A0A075B6K4 115 aa18.97■□□□□ 0.63
ERCC2-205ENST00000485403 APOC4-APOC2K7ER74 178 aa18.97■□□□□ 0.63
ERCC2-205ENST00000485403 STK25O00506 426 aa18.97■□□□□ 0.63
ERCC2-205ENST00000485403 DCLK1O15075 740 aa18.97■□□□□ 0.63
ERCC2-205ENST00000485403 FGF10O15520 208 aaPredicted RBP18.97■□□□□ 0.63
ERCC2-205ENST00000485403 PI15O43692 258 aa18.97■□□□□ 0.63
ERCC2-205ENST00000485403 TBL1XO60907 577 aa18.97■□□□□ 0.63
ERCC2-205ENST00000485403 KAT7O95251 611 aa18.97■□□□□ 0.63
ERCC2-205ENST00000485403 APOC2P02655 101 aa18.97■□□□□ 0.63
ERCC2-205ENST00000485403 GRIA2P42262 883 aa18.97■□□□□ 0.63
ERCC2-205ENST00000485403 PREPLQ4J6C6 727 aaPredicted RBP18.97■□□□□ 0.63
ERCC2-205ENST00000485403 DGKKQ5KSL6 1271 aa18.97■□□□□ 0.63
ERCC2-205ENST00000485403 TTC39BQ5VTQ0 682 aaPredicted RBP18.97■□□□□ 0.63
ERCC2-205ENST00000485403 NCBP2-AS2Q69YL0 99 aa18.97■□□□□ 0.63
ERCC2-205ENST00000485403 KLHL7Q8IXQ5 586 aa18.97■□□□□ 0.63
ERCC2-205ENST00000485403 IGSF8Q969P0 613 aa18.97■□□□□ 0.63
ERCC2-205ENST00000485403 RPRD1AQ96P16 312 aaPredicted RBP18.97■□□□□ 0.63
ERCC2-205ENST00000485403 HOMER3Q9NSC5 361 aa18.97■□□□□ 0.63
ERCC2-205ENST00000485403 NEU3Q9UQ49 428 aa18.97■□□□□ 0.63
ERCC2-205ENST00000485403 TYW5A2RUC4 315 aaKnown RBP18.96■□□□□ 0.63
ERCC2-205ENST00000485403 TRIM24O15164 1050 aa18.96■□□□□ 0.63
ERCC2-205ENST00000485403 NCAM2O15394 837 aa18.96■□□□□ 0.63
ERCC2-205ENST00000485403 PHF2O75151 1096 aa18.96■□□□□ 0.63
ERCC2-205ENST00000485403 EGFP01133 1207 aa18.96■□□□□ 0.63
ERCC2-205ENST00000485403 RPS9P46781 194 aaKnown RBP18.96■□□□□ 0.63
ERCC2-205ENST00000485403 DGKGP49619 791 aa18.96■□□□□ 0.63
ERCC2-205ENST00000485403 SNX1Q13596 522 aa18.96■□□□□ 0.63
ERCC2-205ENST00000485403 RABGAP1LQ5R372 815 aa18.96■□□□□ 0.63
ERCC2-205ENST00000485403 GRAMD4Q6IC98 578 aa18.96■□□□□ 0.63
ERCC2-205ENST00000485403 TMCO3Q6UWJ1 677 aa18.96■□□□□ 0.63
ERCC2-205ENST00000485403 NPNTQ6UXI9 565 aa18.96■□□□□ 0.63
ERCC2-205ENST00000485403 CFAP52Q8N1V2 620 aa18.96■□□□□ 0.63
ERCC2-205ENST00000485403 SYNPOQ8N3V7 929 aa18.96■□□□□ 0.63
ERCC2-205ENST00000485403 TERB1Q8NA31 727 aa18.96■□□□□ 0.63
ERCC2-205ENST00000485403 ATG4AQ8WYN0 398 aa18.96■□□□□ 0.63
ERCC2-205ENST00000485403 P3H4Q92791 437 aa18.96■□□□□ 0.63
ERCC2-205ENST00000485403 FAM118BQ9BPY3 351 aa18.96■□□□□ 0.63
ERCC2-205ENST00000485403 ZYG11BQ9C0D3 744 aa18.96■□□□□ 0.63
ERCC2-205ENST00000485403 MPP6Q9NZW5 540 aa18.96■□□□□ 0.63
ERCC2-205ENST00000485403 SAE1Q9UBE0 346 aaPredicted RBP18.96■□□□□ 0.63
ERCC2-205ENST00000485403 MFHAS1Q9Y4C4 1052 aa18.96■□□□□ 0.63
ERCC2-205ENST00000485403 CHD5Q8TDI0 1954 aa18.96■□□□□ 0.63
ERCC2-205ENST00000485403 DRGXA6NNA5 263 aa18.95■□□□□ 0.62
ERCC2-205ENST00000485403 CHRM1P11229 460 aaPredicted RBP18.95■□□□□ 0.62
ERCC2-205ENST00000485403 PECAM1P16284 738 aaPredicted RBP18.95■□□□□ 0.62
ERCC2-205ENST00000485403 IRAK1P51617 712 aa18.95■□□□□ 0.62
ERCC2-205ENST00000485403 OTUD4Q01804 1114 aaKnown RBP18.95■□□□□ 0.62
ERCC2-205ENST00000485403 KDSRQ06136 332 aa18.95■□□□□ 0.62
ERCC2-205ENST00000485403 LRRC32Q14392 662 aa18.95■□□□□ 0.62
ERCC2-205ENST00000485403 CCNG2Q16589 344 aa18.95■□□□□ 0.62
ERCC2-205ENST00000485403 CYP1B1Q16678 543 aa18.95■□□□□ 0.62
ERCC2-205ENST00000485403 FBXO43Q4G163 708 aa18.95■□□□□ 0.62
ERCC2-205ENST00000485403 MMGT1Q8N4V1 131 aa18.95■□□□□ 0.62
ERCC2-205ENST00000485403 TMEM105Q8N8V8 129 aa18.95■□□□□ 0.62
ERCC2-205ENST00000485403 ZNF557Q8N988 423 aaPredicted RBP18.95■□□□□ 0.62
ERCC2-205ENST00000485403 C12orf50Q8NA57 414 aaPredicted RBP18.95■□□□□ 0.62
ERCC2-205ENST00000485403 ACTL9Q8TC94 416 aa18.95■□□□□ 0.62
ERCC2-205ENST00000485403 KRT12Q99456 494 aa18.95■□□□□ 0.62
ERCC2-205ENST00000485403 FRMD8P1Q9BZ68 369 aaPredicted RBP18.95■□□□□ 0.62
ERCC2-205ENST00000485403 DDX47Q9H0S4 455 aaKnown RBP18.95■□□□□ 0.62
ERCC2-205ENST00000485403 LRRC19Q9H756 370 aa18.95■□□□□ 0.62
ERCC2-205ENST00000485403 LMAN1LQ9HAT1 526 aa18.95■□□□□ 0.62
ERCC2-205ENST00000485403 HEY1Q9Y5J3 304 aa18.95■□□□□ 0.62
ERCC2-205ENST00000485403 A0A1B0GVM2 712 aa18.95■□□□□ 0.62
ERCC2-205ENST00000485403 TCAF2A6NFQ2 919 aa18.95■□□□□ 0.62
ERCC2-205ENST00000485403 K7EQS6 105 aa18.95■□□□□ 0.62
ERCC2-205ENST00000485403 LUC7L3O95232 432 aaKnown RBP18.95■□□□□ 0.62
ERCC2-205ENST00000485403 APODP05090 189 aa18.95■□□□□ 0.62
ERCC2-205ENST00000485403 RHOQP17081 205 aa18.95■□□□□ 0.62
ERCC2-205ENST00000485403 HLA-FP30511 346 aa18.95■□□□□ 0.62
ERCC2-205ENST00000485403 CHRNA3P32297 505 aa18.95■□□□□ 0.62
ERCC2-205ENST00000485403 MAGEA9P43362 315 aa18.95■□□□□ 0.62
ERCC2-205ENST00000485403 GBE1Q04446 702 aa18.95■□□□□ 0.62
ERCC2-205ENST00000485403 PAFAH1B3Q15102 231 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms