RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 USP18Q9UMW8 372 aa18.25■□□□□ 0.51
SREBF1-213ENST00000485080 AP4E1Q9UPM8 1137 aa18.25■□□□□ 0.51
SREBF1-213ENST00000485080 RAD54BQ9Y620 910 aa18.25■□□□□ 0.51
SREBF1-213ENST00000485080 PLXND1Q9Y4D7 1925 aa18.25■□□□□ 0.51
SREBF1-213ENST00000485080 TARSL2A2RTX5 802 aaKnown RBP18.24■□□□□ 0.51
SREBF1-213ENST00000485080 PRR23AA6NEV1 266 aa18.24■□□□□ 0.51
SREBF1-213ENST00000485080 FGF10O15520 208 aaPredicted RBP18.24■□□□□ 0.51
SREBF1-213ENST00000485080 EPHX1P07099 455 aa18.24■□□□□ 0.51
SREBF1-213ENST00000485080 NDUFV2P19404 249 aa18.24■□□□□ 0.51
SREBF1-213ENST00000485080 ETFBP38117 255 aa18.24■□□□□ 0.51
SREBF1-213ENST00000485080 CTSOP43234 321 aaPredicted RBP18.24■□□□□ 0.51
SREBF1-213ENST00000485080 HCAR3P49019 387 aa18.24■□□□□ 0.51
SREBF1-213ENST00000485080 KRT83P78385 493 aa18.24■□□□□ 0.51
SREBF1-213ENST00000485080 RWDD4Q6NW29 188 aaKnown RBP18.24■□□□□ 0.51
SREBF1-213ENST00000485080 PYROXD2Q8N2H3 581 aa18.24■□□□□ 0.51
SREBF1-213ENST00000485080 RTL3Q8N8U3 475 aaKnown RBP18.24■□□□□ 0.51
SREBF1-213ENST00000485080 OR2T3Q8NH03 318 aa18.24■□□□□ 0.51
SREBF1-213ENST00000485080 TEKT4Q8WW24 435 aa18.24■□□□□ 0.51
SREBF1-213ENST00000485080 HMGB4Q8WW32 186 aa18.24■□□□□ 0.51
SREBF1-213ENST00000485080 PSMB7Q99436 277 aa18.24■□□□□ 0.51
SREBF1-213ENST00000485080 SNRNP25Q9BV90 132 aaKnown RBP18.24■□□□□ 0.51
SREBF1-213ENST00000485080 CTTNBP2NLQ9P2B4 639 aa18.24■□□□□ 0.51
SREBF1-213ENST00000485080 HS3ST2Q9Y278 367 aa18.24■□□□□ 0.51
SREBF1-213ENST00000485080 ABCA7Q8IZY2 2146 aa18.23■□□□□ 0.51
SREBF1-213ENST00000485080 A0A0D9SEW6 157 aa18.23■□□□□ 0.51
SREBF1-213ENST00000485080 ATP9BO43861 1147 aa18.23■□□□□ 0.51
SREBF1-213ENST00000485080 ZNF217O75362 1048 aa18.23■□□□□ 0.51
SREBF1-213ENST00000485080 PROSCO94903 275 aa18.23■□□□□ 0.51
SREBF1-213ENST00000485080 EPHB2P29323 1055 aa18.23■□□□□ 0.51
SREBF1-213ENST00000485080 MAN1A1P33908 653 aa18.23■□□□□ 0.51
SREBF1-213ENST00000485080 NNMTP40261 264 aa18.23■□□□□ 0.51
SREBF1-213ENST00000485080 P2RY2P41231 377 aa18.23■□□□□ 0.51
SREBF1-213ENST00000485080 COPAP53621 1224 aa18.23■□□□□ 0.51
SREBF1-213ENST00000485080 GNA12Q03113 381 aa18.23■□□□□ 0.51
SREBF1-213ENST00000485080 SLC20A2Q08357 652 aa18.23■□□□□ 0.51
SREBF1-213ENST00000485080 SIM2Q14190 667 aaPredicted RBP18.23■□□□□ 0.51
SREBF1-213ENST00000485080 DPYSL2Q16555 572 aa18.23■□□□□ 0.51
SREBF1-213ENST00000485080 MAP7D1Q3KQU3 841 aa18.23■□□□□ 0.51
SREBF1-213ENST00000485080 RHOT2Q8IXI1 618 aa18.23■□□□□ 0.51
SREBF1-213ENST00000485080 ACE2Q9BYF1 805 aaPredicted RBP18.23■□□□□ 0.51
SREBF1-213ENST00000485080 MKRN2Q9H000 416 aaKnown RBP18.23■□□□□ 0.51
SREBF1-213ENST00000485080 MUC3BQ9H195 1237 aa18.23■□□□□ 0.51
SREBF1-213ENST00000485080 MAGEH1Q9H213 219 aa18.23■□□□□ 0.51
SREBF1-213ENST00000485080 CATSPERBQ9H7T0 1116 aa18.23■□□□□ 0.51
SREBF1-213ENST00000485080 PRSS16Q9NQE7 514 aa18.23■□□□□ 0.51
SREBF1-213ENST00000485080 BCCIPQ9P287 314 aaKnown RBP eCLIP18.23■□□□□ 0.51
SREBF1-213ENST00000485080 PCSK1NQ9UHG2 260 aa18.23■□□□□ 0.51
SREBF1-213ENST00000485080 SLCO3A1Q9UIG8 710 aa18.23■□□□□ 0.51
SREBF1-213ENST00000485080 SMG5Q9UPR3 1016 aaKnown RBP18.23■□□□□ 0.51
SREBF1-213ENST00000485080 GON4LQ3T8J9 2241 aa18.23■□□□□ 0.51
SREBF1-213ENST00000485080 EDDM13A0A1B0GTR0 161 aa18.22■□□□□ 0.51
SREBF1-213ENST00000485080 ZMPSTE24O75844 475 aa18.22■□□□□ 0.51
SREBF1-213ENST00000485080 IGLV3-19P01714 112 aa18.22■□□□□ 0.51
SREBF1-213ENST00000485080 HLA-EP13747 358 aa18.22■□□□□ 0.51
SREBF1-213ENST00000485080 IL1R2P27930 398 aa18.22■□□□□ 0.51
SREBF1-213ENST00000485080 CYLC1P35663 651 aaPredicted RBP18.22■□□□□ 0.51
SREBF1-213ENST00000485080 ARHGAP25P42331 645 aa18.22■□□□□ 0.51
SREBF1-213ENST00000485080 CLCN6P51797 869 aa18.22■□□□□ 0.51
SREBF1-213ENST00000485080 SLC25A11Q02978 314 aaKnown RBP18.22■□□□□ 0.51
SREBF1-213ENST00000485080 ZBTB16Q05516 673 aa18.22■□□□□ 0.51
SREBF1-213ENST00000485080 C9orf64Q5T6V5 341 aa18.22■□□□□ 0.51
SREBF1-213ENST00000485080 TMPRSS6Q8IU80 811 aa18.22■□□□□ 0.51
SREBF1-213ENST00000485080 UMODL1-AS1Q8N2C9 162 aa18.22■□□□□ 0.51
SREBF1-213ENST00000485080 SLC35G2Q8TBE7 412 aa18.22■□□□□ 0.51
SREBF1-213ENST00000485080 FRS2Q8WU20 508 aa18.22■□□□□ 0.51
SREBF1-213ENST00000485080 RFFLQ8WZ73 363 aa18.22■□□□□ 0.51
SREBF1-213ENST00000485080 LOXL4Q96JB6 756 aa18.22■□□□□ 0.51
SREBF1-213ENST00000485080 BTBD6Q96KE9 485 aa18.22■□□□□ 0.51
SREBF1-213ENST00000485080 DHX35Q9H5Z1 703 aaKnown RBP18.22■□□□□ 0.51
SREBF1-213ENST00000485080 PRDM16Q9HAZ2 1276 aa18.22■□□□□ 0.51
SREBF1-213ENST00000485080 NDFIP2Q9NV92 336 aa18.22■□□□□ 0.51
SREBF1-213ENST00000485080 VPS51Q9UID3 782 aa18.22■□□□□ 0.51
SREBF1-213ENST00000485080 SLC25A13Q9UJS0 675 aa18.22■□□□□ 0.51
SREBF1-213ENST00000485080 CREB3O43889 395 aa18.21■□□□□ 0.51
SREBF1-213ENST00000485080 HADHBP55084 474 aaKnown RBP18.21■□□□□ 0.51
SREBF1-213ENST00000485080 YBEYP58557 167 aaPredicted RBP18.21■□□□□ 0.51
SREBF1-213ENST00000485080 SRSF5Q13243 272 aaKnown RBP18.21■□□□□ 0.51
SREBF1-213ENST00000485080 CA9Q16790 459 aa18.21■□□□□ 0.51
SREBF1-213ENST00000485080 SPDYCQ5MJ68 293 aa18.21■□□□□ 0.51
SREBF1-213ENST00000485080 ASCL5Q7RTU5 278 aa18.21■□□□□ 0.51
SREBF1-213ENST00000485080 SH2D3CQ8N5H7 860 aa18.21■□□□□ 0.51
SREBF1-213ENST00000485080 FAM71BQ8TC56 605 aa18.21■□□□□ 0.51
SREBF1-213ENST00000485080 ARHGEF2Q92974 986 aaKnown RBP18.21■□□□□ 0.51
SREBF1-213ENST00000485080 SPACA7Q96KW9 195 aa18.21■□□□□ 0.51
SREBF1-213ENST00000485080 RPL10LQ96L21 214 aaKnown RBP18.21■□□□□ 0.51
SREBF1-213ENST00000485080 KCTD15Q96SI1 283 aaPredicted RBP18.21■□□□□ 0.51
SREBF1-213ENST00000485080 TPSD1Q9BZJ3 242 aa18.21■□□□□ 0.51
SREBF1-213ENST00000485080 RSPH9Q9H1X1 276 aaPredicted RBP18.21■□□□□ 0.51
SREBF1-213ENST00000485080 LUC7LQ9NQ29 371 aaKnown RBP18.21■□□□□ 0.51
SREBF1-213ENST00000485080 ITM2CQ9NQX7 267 aa18.21■□□□□ 0.51
SREBF1-213ENST00000485080 USP36Q9P275 1121 aaKnown RBP18.21■□□□□ 0.51
SREBF1-213ENST00000485080 RAB23Q9ULC3 237 aa18.21■□□□□ 0.51
SREBF1-213ENST00000485080 EPN1Q9Y6I3 576 aaPredicted RBP18.21■□□□□ 0.51
SREBF1-213ENST00000485080 TTC34A8MYJ7 566 aa18.2■□□□□ 0.5
SREBF1-213ENST00000485080 RAMP2O60895 175 aa18.2■□□□□ 0.5
SREBF1-213ENST00000485080 MAGEA1P43355 309 aa18.2■□□□□ 0.5
SREBF1-213ENST00000485080 STK19P49842 368 aaPredicted RBP18.2■□□□□ 0.5
SREBF1-213ENST00000485080 TPI1P60174 286 aa18.2■□□□□ 0.5
SREBF1-213ENST00000485080 HADHQ16836 314 aaKnown RBP18.2■□□□□ 0.5
SREBF1-213ENST00000485080 PLK5Q496M5 336 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms