RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, human

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMC4-215	ENST00000484799	RPS6KA2	Q15349	733 aa		4.57	□□□□□ -1.68
SMC4-215	ENST00000484799	ODF3L2	Q3SX64	289 aa		4.57	□□□□□ -1.68
SMC4-215	ENST00000484799	RINL	Q6ZS11	566 aa		4.57	□□□□□ -1.68
SMC4-215	ENST00000484799	GPSM1	Q86YR5	675 aa		4.57	□□□□□ -1.68
SMC4-215	ENST00000484799	SVIP	Q8NHG7	77 aa		4.57	□□□□□ -1.68
SMC4-215	ENST00000484799	ZNF333	Q96JL9	665 aa		4.57	□□□□□ -1.68
SMC4-215	ENST00000484799	FAM84B	Q96KN1	310 aa	Predicted RBP	4.57	□□□□□ -1.68
SMC4-215	ENST00000484799	MAP6D1	Q9H9H5	199 aa		4.57	□□□□□ -1.68
SMC4-215	ENST00000484799	BAG5	Q9UL15	447 aa		4.57	□□□□□ -1.68
SMC4-215	ENST00000484799	DTX4	Q9Y2E6	619 aa		4.57	□□□□□ -1.68
SMC4-215	ENST00000484799	LOC105369274	A0A096LPK9	316 aa		4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	LOC102723532	A0A0G2JNH3	316 aa		4.56	□□□□□ -1.68
SMC4-215	ENST00000484799		A0A1B0GVT2	93 aa		4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	MS4A18	H0YCH9	400 aa		4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	VWA5A	O00534	786 aa		4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	LIAS	O43766	372 aa		4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	HOXB9	P17482	250 aa	Predicted RBP	4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	KLRK1	P26718	216 aa		4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	GSTM2	P28161	218 aa		4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	DSCR9	P59020	149 aa		4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	RPL36A	P83881	106 aa	Known RBP	4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	CRYZ	Q08257	329 aa	Known RBP	4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	TBRG1	Q3YBR2	411 aa		4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	INO80D	Q53TQ3	878 aa	Predicted RBP	4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	GGT6	Q6P531	493 aa		4.56	□□□□□ -1.68
SMC4-215	ENST00000484799		Q6ZTC4	211 aa		4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	NR2C2AP	Q86WQ0	139 aa		4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	CCDC117	Q8IWD4	279 aa	Predicted RBP	4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	FAM186B	Q8IYM0	893 aa		4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	OR4N4	Q8N0Y3	316 aa		4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	CMAS	Q8NFW8	434 aa	Predicted RBP	4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	STK33	Q9BYT3	514 aa		4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	B3GNT4	Q9C0J1	378 aa		4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	ZNF304	Q9HCX3	659 aa		4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	TXNRD2	Q9NNW7	524 aa		4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	PCDHA10	Q9Y5I2	948 aa		4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	COPG1	Q9Y678	874 aa	Known RBP	4.56	□□□□□ -1.68
SMC4-215	ENST00000484799	BECN2	A8MW95	431 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	STMND1	H3BQB6	276 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	PCDH17	O14917	1159 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	ASAP2	O43150	1006 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	GLUD1	P00367	558 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	IGFBP2	P18065	325 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	ABCB4	P21439	1286 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	GLUD2	P49448	558 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	RCAN1	P53805	252 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	FOXL2	P58012	376 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	ZP1	P60852	638 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	KEAP1	Q14145	624 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	SYCP2L	Q5T4T6	812 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	IL31	Q6EBC2	164 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	DLK2	Q6UY11	383 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	MDGA2	Q7Z553	956 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	SRL	Q86TD4	932 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	RBMXL3	Q8N7X1	1067 aa	Known RBP	4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	ENDOV	Q8N8Q3	282 aa	Known RBP	4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	PRR26	Q8N8Z3	221 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	KIAA1191	Q96A73	305 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	PHF21B	Q96EK2	531 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	GFM1	Q96RP9	751 aa	Known RBP	4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	MPHOSPH6	Q99547	160 aa	Known RBP	4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	POLDIP3	Q9BY77	421 aa	Known RBP	4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	TRIM31	Q9BZY9	425 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	MAGEH1	Q9H213	219 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	ACTR5	Q9H9F9	607 aa	Predicted RBP	4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	CHST12	Q9NRB3	414 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	PCDHGB1	Q9Y5G3	927 aa		4.55	□□□□□ -1.68
SMC4-215	ENST00000484799	TMEM247	A6NEH6	219 aa		4.54	□□□□□ -1.68
SMC4-215	ENST00000484799	INAFM1	C9JVW0	142 aa		4.54	□□□□□ -1.68
SMC4-215	ENST00000484799	DHH	O43323	396 aa		4.54	□□□□□ -1.68
SMC4-215	ENST00000484799	IFIT2	P09913	472 aa	Known RBP	4.54	□□□□□ -1.68
SMC4-215	ENST00000484799	TNFSF8	P32971	234 aa		4.54	□□□□□ -1.68
SMC4-215	ENST00000484799	GAS1	P54826	345 aa		4.54	□□□□□ -1.68
SMC4-215	ENST00000484799	POLE2	P56282	527 aa		4.54	□□□□□ -1.68
SMC4-215	ENST00000484799	TMPRSS3	P57727	454 aa		4.54	□□□□□ -1.68
SMC4-215	ENST00000484799	GPS2	Q13227	327 aa		4.54	□□□□□ -1.68
SMC4-215	ENST00000484799	ALKBH1	Q13686	389 aa	Known RBP	4.54	□□□□□ -1.68
SMC4-215	ENST00000484799	ZACN	Q401N2	412 aa		4.54	□□□□□ -1.68
SMC4-215	ENST00000484799	LRRC57	Q8N9N7	239 aa		4.54	□□□□□ -1.68
SMC4-215	ENST00000484799	DEPTOR	Q8TB45	409 aa		4.54	□□□□□ -1.68
SMC4-215	ENST00000484799	SLC39A13	Q96H72	371 aa		4.54	□□□□□ -1.68
SMC4-215	ENST00000484799	PDE11A	Q9HCR9	933 aa		4.54	□□□□□ -1.68
SMC4-215	ENST00000484799	PHTF1	Q9UMS5	762 aa		4.54	□□□□□ -1.68
SMC4-215	ENST00000484799	LRCH1	Q9Y2L9	728 aa		4.54	□□□□□ -1.68
SMC4-215	ENST00000484799	TCRBV7S3A2	A0A539	114 aa		4.53	□□□□□ -1.68
SMC4-215	ENST00000484799	AGAP5	A6NIR3	686 aa		4.53	□□□□□ -1.68
SMC4-215	ENST00000484799	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.53	□□□□□ -1.68
SMC4-215	ENST00000484799	ASNA1	O43681	348 aa		4.53	□□□□□ -1.68
SMC4-215	ENST00000484799	KIF1C	O43896	1103 aa	Known RBP	4.53	□□□□□ -1.68
SMC4-215	ENST00000484799	CCNT1	O60563	726 aa	Known RBP	4.53	□□□□□ -1.68
SMC4-215	ENST00000484799	PLA2G2A	P14555	144 aa		4.53	□□□□□ -1.68
SMC4-215	ENST00000484799	CHRNB2	P17787	502 aa		4.53	□□□□□ -1.68
SMC4-215	ENST00000484799	ART1	P52961	327 aa		4.53	□□□□□ -1.68
SMC4-215	ENST00000484799	MORC3	Q14149	939 aa		4.53	□□□□□ -1.68
SMC4-215	ENST00000484799	HLF	Q16534	295 aa		4.53	□□□□□ -1.68
SMC4-215	ENST00000484799	C5orf22	Q49AR2	442 aa		4.53	□□□□□ -1.68
SMC4-215	ENST00000484799	FAM171A1	Q5VUB5	890 aa		4.53	□□□□□ -1.68
SMC4-215	ENST00000484799	TMEM268	Q5VZI3	342 aa		4.53	□□□□□ -1.68
SMC4-215	ENST00000484799	HEPHL1	Q6MZM0	1159 aa		4.53	□□□□□ -1.68
SMC4-215	ENST00000484799	PGBD2	Q6P3X8	592 aa		4.53	□□□□□ -1.68

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