RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 LAYNQ6UX15 382 aa11.79□□□□□ -0.52
SCFD1-206ENST00000484733 CIR1Q86X95 450 aaPredicted RBP11.79□□□□□ -0.52
SCFD1-206ENST00000484733 CREBRFQ8IUR6 639 aa11.79□□□□□ -0.52
SCFD1-206ENST00000484733 PASD1Q8IV76 773 aa11.79□□□□□ -0.52
SCFD1-206ENST00000484733 NT5C3BQ969T7 300 aa11.79□□□□□ -0.52
SCFD1-206ENST00000484733 NPY6RQ99463 290 aa11.79□□□□□ -0.52
SCFD1-206ENST00000484733 CCDC86Q9H6F5 360 aaKnown RBP11.79□□□□□ -0.52
SCFD1-206ENST00000484733 ERVMER34-1Q9H9K5 563 aa11.79□□□□□ -0.52
SCFD1-206ENST00000484733 CEP295Q9C0D2 2601 aa11.79□□□□□ -0.52
SCFD1-206ENST00000484733 FAM47DPA6NHR8 397 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 E9PAM4 449 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 PAGE1O75459 146 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 IL1BP01584 269 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 CXCR3P49682 368 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 SHBQ15464 509 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 OTUD1Q5VV17 481 aaPredicted RBP11.78□□□□□ -0.52
SCFD1-206ENST00000484733 OXR1Q8N573 874 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 OR14C36Q8NHC7 312 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 NDST4Q9H3R1 872 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 PPM1HQ9ULR3 514 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 DMTF1Q9Y222 760 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 PCDHGA1Q9Y5H4 931 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 DRGXA6NNA5 263 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 M0QYT0 321 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 MCF2LO15068 1137 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 PLRG1O43660 514 aaKnown RBP11.78□□□□□ -0.52
SCFD1-206ENST00000484733 GRAP2O75791 330 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 F9P00740 461 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 CDK4P11802 303 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 ERCC5P28715 1186 aaPredicted RBP11.78□□□□□ -0.52
SCFD1-206ENST00000484733 RXRGP48443 463 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 SMAD1Q15797 465 aaKnown RBP11.78□□□□□ -0.52
SCFD1-206ENST00000484733 TPD52L1Q16890 204 aaPredicted RBP11.78□□□□□ -0.52
SCFD1-206ENST00000484733 VWA3BQ502W6 1294 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 CT47A1Q5JQC4 288 aaPredicted RBP11.78□□□□□ -0.52
SCFD1-206ENST00000484733 MIIPQ5JXC2 388 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 NAPEPLDQ6IQ20 393 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 LRSAM1Q6UWE0 723 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.78□□□□□ -0.52
SCFD1-206ENST00000484733 C14orf80Q86SX3 495 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 PRPF39Q86UA1 669 aaKnown RBP11.78□□□□□ -0.52
SCFD1-206ENST00000484733 SLC47A2Q86VL8 602 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 IQCHQ86VS3 1027 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 TRIM69Q86WT6 500 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 ZNF683Q8IZ20 524 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 SH2D3CQ8N5H7 860 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 MFSD2AQ8NA29 543 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 OR52K2Q8NGK3 314 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 C1orf74Q96LT6 269 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 CLSTN2Q9H4D0 955 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 AASDHPPTQ9NRN7 309 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.78□□□□□ -0.52
SCFD1-206ENST00000484733 FTSJ1Q9UET6 329 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 VANGL2Q9ULK5 521 aa11.78□□□□□ -0.52
SCFD1-206ENST00000484733 SYNJ2BP-COX16A0A087WUM0 186 aa11.77□□□□□ -0.52
SCFD1-206ENST00000484733 C1QTNF3-AMACRE9PGA6 284 aa11.77□□□□□ -0.52
SCFD1-206ENST00000484733 C1SP09871 688 aa11.77□□□□□ -0.52
SCFD1-206ENST00000484733 VAV1P15498 845 aa11.77□□□□□ -0.52
SCFD1-206ENST00000484733 NXPH1P58417 271 aa11.77□□□□□ -0.52
SCFD1-206ENST00000484733 KRT83P78385 493 aa11.77□□□□□ -0.52
SCFD1-206ENST00000484733 CENPCQ03188 943 aa11.77□□□□□ -0.52
SCFD1-206ENST00000484733 OVGP1Q12889 678 aa11.77□□□□□ -0.52
SCFD1-206ENST00000484733 NME3Q13232 169 aa11.77□□□□□ -0.52
SCFD1-206ENST00000484733 DLG2Q15700 870 aa11.77□□□□□ -0.52
SCFD1-206ENST00000484733 TMEM35BQ8NCS4 154 aa11.77□□□□□ -0.52
SCFD1-206ENST00000484733 SAP25Q8TEE9 199 aa11.77□□□□□ -0.52
SCFD1-206ENST00000484733 WDCPQ9H6R7 721 aa11.77□□□□□ -0.52
SCFD1-206ENST00000484733 GDF3Q9NR23 364 aa11.77□□□□□ -0.52
SCFD1-206ENST00000484733 COX16Q9P0S2 106 aa11.77□□□□□ -0.52
SCFD1-206ENST00000484733 ARHGAP20Q9P2F6 1191 aa11.77□□□□□ -0.52
SCFD1-206ENST00000484733 STAP1Q9ULZ2 295 aa11.77□□□□□ -0.52
SCFD1-206ENST00000484733 HS3ST2Q9Y278 367 aa11.77□□□□□ -0.52
SCFD1-206ENST00000484733 PAXBP1Q9Y5B6 917 aa11.77□□□□□ -0.52
SCFD1-206ENST00000484733 TBC1D3DA0A087WVF3 549 aa11.77□□□□□ -0.53
SCFD1-206ENST00000484733 TBC1D3IA0A087WXS9 549 aa11.77□□□□□ -0.53
SCFD1-206ENST00000484733 TBC1D3EA0A087X179 549 aa11.77□□□□□ -0.53
SCFD1-206ENST00000484733 TBC1D3KA0A087X1G2 549 aa11.77□□□□□ -0.53
SCFD1-206ENST00000484733 TBC1D3FA6NER0 549 aaPredicted RBP11.77□□□□□ -0.53
SCFD1-206ENST00000484733 TBC1D3LB9A6J9 549 aa11.77□□□□□ -0.53
SCFD1-206ENST00000484733 TLR4O00206 839 aa11.77□□□□□ -0.53
SCFD1-206ENST00000484733 WNT9AO14904 365 aa11.77□□□□□ -0.53
SCFD1-206ENST00000484733 MAGEC1O60732 1142 aa11.77□□□□□ -0.53
SCFD1-206ENST00000484733 TBC1D3HP0C7X1 549 aa11.77□□□□□ -0.53
SCFD1-206ENST00000484733 IRAK1P51617 712 aa11.77□□□□□ -0.53
SCFD1-206ENST00000484733 TBC1D3GQ6DHY5 549 aa11.77□□□□□ -0.53
SCFD1-206ENST00000484733 TBC1D3CQ6IPX1 549 aa11.77□□□□□ -0.53
SCFD1-206ENST00000484733 SETD3Q86TU7 594 aaPredicted RBP11.77□□□□□ -0.53
SCFD1-206ENST00000484733 TBC1D3Q8IZP1 549 aaPredicted RBP11.77□□□□□ -0.53
SCFD1-206ENST00000484733 SERAC1Q96JX3 654 aa11.77□□□□□ -0.53
SCFD1-206ENST00000484733 PSMB7Q99436 277 aa11.77□□□□□ -0.53
SCFD1-206ENST00000484733 NAA15Q9BXJ9 866 aaKnown RBP11.77□□□□□ -0.53
SCFD1-206ENST00000484733 SYNCQ9H7C4 482 aa11.77□□□□□ -0.53
SCFD1-206ENST00000484733 PIGVQ9NUD9 493 aa11.77□□□□□ -0.53
SCFD1-206ENST00000484733 DACH1Q9UI36 760 aa11.77□□□□□ -0.53
SCFD1-206ENST00000484733 VPS28Q9UK41 221 aa11.77□□□□□ -0.53
SCFD1-206ENST00000484733 SARDHQ9UL12 918 aa11.77□□□□□ -0.53
SCFD1-206ENST00000484733 FRYQ5TBA9 3013 aa11.77□□□□□ -0.53
SCFD1-206ENST00000484733 RNGTTO60942 597 aaKnown RBP11.76□□□□□ -0.53
SCFD1-206ENST00000484733 ADCY5O95622 1261 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 PPP2CBP62714 309 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms