RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 GKAP1Q5VSY0 366 aaPredicted RBP3.59□□□□□ -1.83
FXN-204ENST00000484259 CST9LP1Q5W188 147 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 PTRHD1Q6GMV3 140 aaKnown RBP3.59□□□□□ -1.83
FXN-204ENST00000484259 GALNT18Q6P9A2 607 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 KCNT2Q6UVM3 1135 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 SUSD1Q6UWL2 747 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 KDM7AQ6ZMT4 941 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 TRIM72Q6ZMU5 477 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 STXBP4Q6ZWJ1 553 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 TRMT10CQ7L0Y3 403 aaKnown RBP3.59□□□□□ -1.83
FXN-204ENST00000484259 RRAGAQ7L523 313 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 VASH1Q7L8A9 365 aaPredicted RBP3.59□□□□□ -1.83
FXN-204ENST00000484259 FAM83AQ86UY5 434 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 FAM124AQ86V42 546 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 TPRA1Q86W33 373 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 ZZZ3Q8IYH5 903 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 ELMOD2Q8IZ81 293 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 PYROXD2Q8N2H3 581 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 KDM8Q8N371 416 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 ARHGEF39Q8N4T4 335 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 OXR1Q8N573 874 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 WDTC1Q8N5D0 677 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 FRMD1Q8N878 549 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 BANPQ8N9N5 519 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 POC5Q8NA72 575 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 KDF1Q8NAX2 398 aaPredicted RBP3.59□□□□□ -1.83
FXN-204ENST00000484259 ATAD1Q8NBU5 361 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 GLB1L3Q8NCI6 653 aaPredicted RBP3.59□□□□□ -1.83
FXN-204ENST00000484259 CCDC150Q8NCX0 1101 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 RCBTB1Q8NDN9 531 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 BHLHE23Q8NDY6 225 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 B4GALNT2Q8NHY0 566 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.59□□□□□ -1.83
FXN-204ENST00000484259 ENKURQ8TC29 256 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 ZNF384Q8TF68 577 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 PDCD6IPQ8WUM4 868 aaKnown RBP3.59□□□□□ -1.83
FXN-204ENST00000484259 TCP11Q8WWU5 503 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 RAPGEF4Q8WZA2 1011 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 LPIN2Q92539 896 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 NCSTNQ92542 709 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 FBXO32Q969P5 355 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 SLC35B4Q969S0 331 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 NXPE3Q969Y0 559 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 RGMAQ96B86 450 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 SLC22A18Q96BI1 424 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 MRPL38Q96DV4 380 aaKnown RBP3.59□□□□□ -1.83
FXN-204ENST00000484259 PGM2Q96G03 612 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 RAX2Q96IS3 184 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 CFAP57Q96MR6 1250 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 GDAP1L1Q96MZ0 367 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 SLC6A18Q96N87 628 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 TRAPPC9Q96Q05 1148 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 TRNT1Q96Q11 434 aaKnown RBP3.59□□□□□ -1.83
FXN-204ENST00000484259 SSX3Q99909 188 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 LBHD1Q9BQE6 289 aaPredicted RBP3.59□□□□□ -1.83
FXN-204ENST00000484259 FERMT1Q9BQL6 677 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 WDR18Q9BV38 432 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 MOV10L1Q9BXT6 1211 aaKnown RBP3.59□□□□□ -1.83
FXN-204ENST00000484259 GPR62Q9BZJ7 368 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 GPR61Q9BZJ8 451 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 SHCBP1LQ9BZQ2 653 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 TRIM31Q9BZY9 425 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 USP44Q9H0E7 712 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 QRSL1Q9H0R6 528 aaKnown RBP3.59□□□□□ -1.83
FXN-204ENST00000484259 SH2D4AQ9H788 454 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 TMEM206Q9H813 350 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 SCPEP1Q9HB40 452 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 IL26Q9NPH9 171 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.59□□□□□ -1.83
FXN-204ENST00000484259 PRDM8Q9NQV8 689 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 RAB6BQ9NRW1 208 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 TBC1D13Q9NVG8 400 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 FAM86C1Q9NVL1 165 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 KLHL28Q9NXS3 571 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 VPS54Q9P1Q0 977 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 CPNE7Q9UBL6 633 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 SPASTQ9UBP0 616 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 AFF4Q9UHB7 1163 aaKnown RBP3.59□□□□□ -1.83
FXN-204ENST00000484259 RSPH14Q9UHP6 348 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 CNOT7Q9UIV1 285 aaKnown RBP3.59□□□□□ -1.83
FXN-204ENST00000484259 INTS6Q9UL03 887 aaKnown RBP3.59□□□□□ -1.83
FXN-204ENST00000484259 CDH7Q9ULB5 785 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 NSFL1CQ9UNZ2 370 aaKnown RBP3.59□□□□□ -1.83
FXN-204ENST00000484259 PHF24Q9UPV7 400 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 TDRKHQ9Y2W6 561 aaKnown RBP3.59□□□□□ -1.83
FXN-204ENST00000484259 MRPS2Q9Y399 296 aaKnown RBP3.59□□□□□ -1.83
FXN-204ENST00000484259 HRH3Q9Y5N1 445 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 CORINQ9Y5Q5 1042 aa3.59□□□□□ -1.83
FXN-204ENST00000484259 CFAP20Q9Y6A4 193 aaKnown RBP3.59□□□□□ -1.83
FXN-204ENST00000484259 NCOA3Q9Y6Q9 1424 aa3.59□□□□□ -1.84
FXN-204ENST00000484259 GOLGA3Q08378 1498 aa3.59□□□□□ -1.84
FXN-204ENST00000484259 COL17A1Q9UMD9 1497 aaPredicted RBP3.59□□□□□ -1.84
FXN-204ENST00000484259 C1orf232A0A0U1RR37 186 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 GOLGA6L10A6NI86 522 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 FAM170BA6NMN3 283 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 GOLGA8MH3BSY2 632 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 H3BUI4 141 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 GPR25O00155 361 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 HIP1O00291 1037 aa3.58□□□□□ -1.84
FXN-204ENST00000484259 FCHO1O14526 889 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms