RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 PPFIA2O75334 1257 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 VPS4BO75351 444 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 SNRNP70P08621 437 aaKnown RBP4.71□□□□□ -1.66
PTCD3-214ENST00000483925 ALADP13716 330 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 KCNA3P22001 575 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 TLX1P31314 330 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-214ENST00000483925 CD86P42081 329 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 NRIP1P48552 1158 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 GATMP50440 423 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 SLC12A2P55011 1212 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 RAP2BP61225 183 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 PSMC6P62333 389 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 OLR1P78380 273 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 DDR1Q08345 913 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 CLCA4Q14CN2 919 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 TAF7Q15545 349 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-214ENST00000483925 ZIK1Q3SY52 487 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-214ENST00000483925 LRRC24Q50LG9 513 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 ZNF805Q5CZA5 627 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 ARMC4Q5T2S8 1044 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 CERCAMQ5T4B2 595 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 MTFR2Q6P444 385 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 KRT27Q7Z3Y8 459 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 MRGPRGQ86SM5 289 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 GLRX5Q86SX6 157 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 TMPRSS6Q8IU80 811 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 DNAJC10Q8IXB1 793 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 CMTM4Q8IZR5 234 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 PDPRQ8NCN5 879 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 OR6J1Q8NGC5 347 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 LILRB1Q8NHL6 650 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-214ENST00000483925 TBC1D15Q8TC07 691 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 OVCA2Q8WZ82 227 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 ARRDC3Q96B67 414 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 CENPTQ96BT3 561 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 INTS12Q96CB8 462 aaKnown RBP4.71□□□□□ -1.66
PTCD3-214ENST00000483925 KLHL29Q96CT2 875 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 SAT2Q96F10 170 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-214ENST00000483925 TMEM176AQ96HP8 235 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 FAR2Q96K12 515 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 CABS1Q96KC9 395 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 PHACTR3Q96KR7 559 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 MAP7D2Q96T17 732 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 MPHOSPH9Q99550 1183 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 VKORC1Q9BQB6 163 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 TTC12Q9H892 705 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-214ENST00000483925 FBXO28Q9NVF7 368 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 CD207Q9UJ71 328 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 MTMR6Q9Y217 621 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 KLHL20Q9Y2M5 609 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 UBE2J1Q9Y385 318 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-214ENST00000483925 REXO2Q9Y3B8 237 aaKnown RBP4.71□□□□□ -1.66
PTCD3-214ENST00000483925 TRPV2Q9Y5S1 764 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 RAD54BQ9Y620 910 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 IKBKGQ9Y6K9 419 aa4.71□□□□□ -1.66
PTCD3-214ENST00000483925 TBC1D3DA0A087WVF3 549 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 TBC1D3IA0A087WXS9 549 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 TBC1D3EA0A087X179 549 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 TBC1D3KA0A087X1G2 549 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 LOC105369274A0A096LPK9 316 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 LOC102723532A0A0G2JNH3 316 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 GXYLT2A0PJZ3 443 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 CDHR4A6H8M9 788 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 TBC1D3BA6NDS4 549 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 TBC1D3FA6NER0 549 aaPredicted RBP4.7□□□□□ -1.66
PTCD3-214ENST00000483925 TBC1D3LB9A6J9 549 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 H0YAE9 185 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 PSMD14O00487 310 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 MPHOSPH10O00566 681 aaKnown RBP4.7□□□□□ -1.66
PTCD3-214ENST00000483925 CTDSP2O14595 271 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 SYN3O14994 580 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 ZBTB14O43829 449 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 KERAO60938 352 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 HEXIM1O94992 359 aaKnown RBP4.7□□□□□ -1.66
PTCD3-214ENST00000483925 OR2C1O95371 312 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 PEX11BO96011 259 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 LMNAP02545 664 aaKnown RBP4.7□□□□□ -1.66
PTCD3-214ENST00000483925 SLC4A1P02730 911 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 URODP06132 367 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 ABCB1P08183 1280 aaPredicted RBP4.7□□□□□ -1.66
PTCD3-214ENST00000483925 TBC1D3HP0C7X1 549 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 ACP5P13686 325 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 MAPK3P27361 379 aaPredicted RBP4.7□□□□□ -1.66
PTCD3-214ENST00000483925 EPHA3P29320 983 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 THBS4P35443 961 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 CPOXP36551 454 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 HSD17B7P56937 341 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 LILRA4P59901 499 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 IL1RL1Q01638 556 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 SLFN5Q08AF3 891 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 COASYQ13057 564 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 PCLAFQ15004 111 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 TNIP1Q15025 636 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 SMU1Q2TAY7 513 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 DPCR1Q3MIW9 517 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 CRY2Q49AN0 593 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 SLC9B1Q4ZJI4 515 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 RUNDC3AQ59EK9 446 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 ZNF628Q5EBL2 1059 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms