RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 PRAMEF26H0Y7S4 382 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 J3QKU1 62 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 SLC31A1O15431 190 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 PLRG1O43660 514 aaKnown RBP13.21□□□□□ -0.29
TMEM54-206ENST00000482771 MPOP05164 745 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 DGKAP23743 735 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 PRCPP42785 496 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 FKBP3Q00688 224 aaKnown RBP13.21□□□□□ -0.29
TMEM54-206ENST00000482771 SULT2A1Q06520 285 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 CNTN1Q12860 1018 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 NNTQ13423 1086 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 HS1BP3Q53T59 392 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 ARHGAP40Q5TG30 622 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 FAM46CQ5VWP2 391 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 ANKRD40Q6AI12 368 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 TMC6Q7Z403 805 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 DSG4Q86SJ6 1040 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 TAC4Q86UU9 113 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 CHSY1Q86X52 802 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 ZNF248Q8NDW4 579 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 OR8D1Q8WZ84 308 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 KLK6Q92876 244 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 KAT5Q92993 513 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 ZNF578Q96N58 590 aaPredicted RBP13.21□□□□□ -0.29
TMEM54-206ENST00000482771 OSBPL2Q9H1P3 480 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 CPNE5Q9HCH3 593 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 ST7Q9NRC1 585 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 UCKL1Q9NWZ5 548 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 ARMCX3Q9UH62 379 aaPredicted RBP13.21□□□□□ -0.29
TMEM54-206ENST00000482771 PPM1HQ9ULR3 514 aa13.21□□□□□ -0.29
TMEM54-206ENST00000482771 PIEZO2Q9H5I5 2752 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 ERVH48-1M5A8F1 160 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 SLC16A3O15427 465 aaKnown RBP13.2□□□□□ -0.3
TMEM54-206ENST00000482771 FFAR2O15552 330 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 SLC7A4O43246 635 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 OPA1O60313 960 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 ZNF202O95125 648 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 APOEP02649 317 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 MYF5P13349 255 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 ZNF18P17022 549 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 PLK1P53350 603 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 SLC12A1Q13621 1099 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 STILQ15468 1287 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 DLG2Q15700 870 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 SETMARQ53H47 684 aaPredicted RBP13.2□□□□□ -0.3
TMEM54-206ENST00000482771 BROXQ5VW32 411 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 TRIM69Q86WT6 500 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 CCAR2Q8N163 923 aaKnown RBP13.2□□□□□ -0.3
TMEM54-206ENST00000482771 PPM1KQ8N3J5 372 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 SLC35C1Q96A29 364 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 FAM131CQ96AQ9 280 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 BTN2A3PQ96KV6 586 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 NT5C1BQ96P26 610 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 TSG101Q99816 390 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 MYOCQ99972 504 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 CAAP1Q9H8G2 361 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 KLHL11Q9NVR0 708 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 SLC12A6Q9UHW9 1150 aa13.2□□□□□ -0.3
TMEM54-206ENST00000482771 TDRD6O60522 2096 aaKnown RBP13.19□□□□□ -0.3
TMEM54-206ENST00000482771 KCNU1A8MYU2 1149 aa13.19□□□□□ -0.3
TMEM54-206ENST00000482771 F5H5T6 163 aa13.19□□□□□ -0.3
TMEM54-206ENST00000482771 MCF2LO15068 1137 aa13.19□□□□□ -0.3
TMEM54-206ENST00000482771 BNIP3LO60238 219 aa13.19□□□□□ -0.3
TMEM54-206ENST00000482771 RNGTTO60942 597 aaKnown RBP13.19□□□□□ -0.3
TMEM54-206ENST00000482771 USP12O75317 370 aa13.19□□□□□ -0.3
TMEM54-206ENST00000482771 TRUB2O95900 331 aaKnown RBP13.19□□□□□ -0.3
TMEM54-206ENST00000482771 THEGLP0DJG4 465 aa13.19□□□□□ -0.3
TMEM54-206ENST00000482771 PRLRP16471 622 aa13.19□□□□□ -0.3
TMEM54-206ENST00000482771 GPD2P43304 727 aa13.19□□□□□ -0.3
TMEM54-206ENST00000482771 RPL34P49207 117 aaKnown RBP13.19□□□□□ -0.3
TMEM54-206ENST00000482771 PMS1P54277 932 aaKnown RBP13.19□□□□□ -0.3
TMEM54-206ENST00000482771 PCBP4P57723 403 aaKnown RBP13.19□□□□□ -0.3
TMEM54-206ENST00000482771 RHDQ02161 417 aa13.19□□□□□ -0.3
TMEM54-206ENST00000482771 KCNMA1Q12791 1236 aa13.19□□□□□ -0.3
TMEM54-206ENST00000482771 AGBL4Q5VU57 503 aa13.19□□□□□ -0.3
TMEM54-206ENST00000482771 CDCP2Q5VXM1 449 aa13.19□□□□□ -0.3
TMEM54-206ENST00000482771 RRAGAQ7L523 313 aa13.19□□□□□ -0.3
TMEM54-206ENST00000482771 CIR1Q86X95 450 aaPredicted RBP13.19□□□□□ -0.3
TMEM54-206ENST00000482771 LSMEM2Q8N112 164 aa13.19□□□□□ -0.3
TMEM54-206ENST00000482771 ATP6V0D2Q8N8Y2 350 aa13.19□□□□□ -0.3
TMEM54-206ENST00000482771 OR4C6Q8NH72 309 aa13.19□□□□□ -0.3
TMEM54-206ENST00000482771 WBP1Q96G27 269 aa13.19□□□□□ -0.3
TMEM54-206ENST00000482771 HIC2Q96JB3 615 aa13.19□□□□□ -0.3
TMEM54-206ENST00000482771 PPP1R9BQ96SB3 815 aa13.19□□□□□ -0.3
TMEM54-206ENST00000482771 ABCG4Q9H172 646 aa13.19□□□□□ -0.3
TMEM54-206ENST00000482771 GOLPH3LQ9H4A5 285 aa13.19□□□□□ -0.3
TMEM54-206ENST00000482771 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.19□□□□□ -0.3
TMEM54-206ENST00000482771 TP53BP1Q12888 1972 aaPredicted RBP13.18□□□□□ -0.3
TMEM54-206ENST00000482771 A0A1W2PQU0 124 aa13.18□□□□□ -0.3
TMEM54-206ENST00000482771 C1QTNF3-AMACRE9PGA6 284 aa13.18□□□□□ -0.3
TMEM54-206ENST00000482771 KLK10O43240 276 aa13.18□□□□□ -0.3
TMEM54-206ENST00000482771 SART1O43290 800 aaKnown RBP13.18□□□□□ -0.3
TMEM54-206ENST00000482771 ATP9BO43861 1147 aa13.18□□□□□ -0.3
TMEM54-206ENST00000482771 CKMT1AP12532 417 aa13.18□□□□□ -0.3
TMEM54-206ENST00000482771 LSSP48449 732 aa13.18□□□□□ -0.3
TMEM54-206ENST00000482771 FMO5P49326 533 aa13.18□□□□□ -0.3
TMEM54-206ENST00000482771 OXCT1P55809 520 aa13.18□□□□□ -0.3
TMEM54-206ENST00000482771 TMPRSS3P57727 454 aa13.18□□□□□ -0.3
TMEM54-206ENST00000482771 TAS2R38P59533 333 aa13.18□□□□□ -0.3
TMEM54-206ENST00000482771 GABREP78334 506 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms