RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 ALOX15P16050 662 aaPredicted RBP15.21■□□□□ 0.03
ATG4B-220ENST00000482507 HARS2P49590 506 aaKnown RBP15.21■□□□□ 0.03
ATG4B-220ENST00000482507 LBX1P52954 281 aa15.21■□□□□ 0.03
ATG4B-220ENST00000482507 AP2B1P63010 937 aa15.21■□□□□ 0.03
ATG4B-220ENST00000482507 CDC16Q13042 620 aa15.21■□□□□ 0.03
ATG4B-220ENST00000482507 USP4Q13107 963 aa15.21■□□□□ 0.03
ATG4B-220ENST00000482507 CCNIQ14094 377 aa15.21■□□□□ 0.03
ATG4B-220ENST00000482507 DPYSQ14117 519 aa15.21■□□□□ 0.03
ATG4B-220ENST00000482507 DLG2Q15700 870 aa15.21■□□□□ 0.03
ATG4B-220ENST00000482507 THEMIS2Q5TEJ8 643 aa15.21■□□□□ 0.03
ATG4B-220ENST00000482507 ACVR1CQ8NER5 493 aa15.21■□□□□ 0.03
ATG4B-220ENST00000482507 MOCOSQ96EN8 888 aa15.21■□□□□ 0.03
ATG4B-220ENST00000482507 HSFY1Q96LI6 401 aa15.21■□□□□ 0.03
ATG4B-220ENST00000482507 AGAP3Q96P47 875 aa15.21■□□□□ 0.03
ATG4B-220ENST00000482507 ECSITQ9BQ95 431 aa15.21■□□□□ 0.03
ATG4B-220ENST00000482507 PPP1R12CQ9BZL4 782 aa15.21■□□□□ 0.03
ATG4B-220ENST00000482507 PIGVQ9NUD9 493 aa15.21■□□□□ 0.03
ATG4B-220ENST00000482507 RCOR3Q9P2K3 495 aaPredicted RBP15.21■□□□□ 0.03
ATG4B-220ENST00000482507 SCOCQ9UIL1 159 aa15.21■□□□□ 0.03
ATG4B-220ENST00000482507 SMIM28A0A1B0GU29 152 aa15.21■□□□□ 0.02
ATG4B-220ENST00000482507 GP5P40197 560 aa15.21■□□□□ 0.02
ATG4B-220ENST00000482507 MAGEA12P43365 314 aa15.21■□□□□ 0.02
ATG4B-220ENST00000482507 IRF9Q00978 393 aa15.21■□□□□ 0.02
ATG4B-220ENST00000482507 C6orf163Q5TEZ5 329 aa15.21■□□□□ 0.02
ATG4B-220ENST00000482507 PGM2L1Q6PCE3 622 aa15.21■□□□□ 0.02
ATG4B-220ENST00000482507 NME8Q8N427 588 aa15.21■□□□□ 0.02
ATG4B-220ENST00000482507 ATP2A3Q93084 1043 aa15.21■□□□□ 0.02
ATG4B-220ENST00000482507 NT5C3BQ969T7 300 aa15.21■□□□□ 0.02
ATG4B-220ENST00000482507 STN1Q9H668 368 aaKnown RBP15.21■□□□□ 0.02
ATG4B-220ENST00000482507 CAB39LQ9H9S4 337 aa15.21■□□□□ 0.02
ATG4B-220ENST00000482507 S100A14Q9HCY8 104 aa15.21■□□□□ 0.02
ATG4B-220ENST00000482507 MAN1C1Q9NR34 630 aa15.21■□□□□ 0.02
ATG4B-220ENST00000482507 C17orf102A2RUQ5 167 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 DCLK1O15075 740 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 ZBTB14O43829 449 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 KLHL2O95198 593 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 GRK2P25098 689 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 CRABP2P29373 138 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 ACADSBP45954 432 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 COPAP53621 1224 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 EPHB1P54762 984 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 ADAM17P78536 824 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 NME3Q13232 169 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 INSCQ1MX18 579 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 EFHC1Q5JVL4 640 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 PDPK2PQ6A1A2 396 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 GDF6Q6KF10 455 aaPredicted RBP15.2■□□□□ 0.02
ATG4B-220ENST00000482507 PAQR9Q6ZVX9 377 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 ZNF781Q8N8C0 355 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 SPDYE1Q8NFV5 336 aaPredicted RBP15.2■□□□□ 0.02
ATG4B-220ENST00000482507 MAPK15Q8TD08 544 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 DEFB118Q96PH6 123 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 NPY6RQ99463 290 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 VCXQ9H320 206 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 SNX25Q9H3E2 840 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 CYP4F11Q9HBI6 524 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 ACSS2Q9NR19 701 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 IGSF9Q9P2J2 1179 aa15.2■□□□□ 0.02
ATG4B-220ENST00000482507 LOC100653049A0A140TA62 436 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 RRN3P2A6NIE6 340 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 G3V2L1 256 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 M0QYT0 321 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 XPO1O14980 1071 aaKnown RBP15.19■□□□□ 0.02
ATG4B-220ENST00000482507 CCNT2O60583 730 aaKnown RBP15.19■□□□□ 0.02
ATG4B-220ENST00000482507 DAB1O75553 588 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 KRT34O76011 436 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 POLBP06746 335 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 CPA3P15088 417 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 ACAT1P24752 427 aaKnown RBP15.19■□□□□ 0.02
ATG4B-220ENST00000482507 DSG1Q02413 1049 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 BTKQ06187 659 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 NAB1Q13506 487 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 PAFAH1B3Q15102 231 aaKnown RBP15.19■□□□□ 0.02
ATG4B-220ENST00000482507 PDK1Q15118 436 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 ZRSR2Q15696 482 aaKnown RBP15.19■□□□□ 0.02
ATG4B-220ENST00000482507 FRMD7Q6ZUT3 714 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 PID1Q7Z2X4 250 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 LIMS2Q7Z4I7 341 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 RNF180Q86T96 592 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 CCNJLQ8IV13 435 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 ADAM32Q8TC27 787 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 ISL2Q96A47 359 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 KATNAL1Q9BW62 490 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 DNAJB4Q9UDY4 337 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 MAGED2Q9UNF1 606 aaPredicted RBP15.19■□□□□ 0.02
ATG4B-220ENST00000482507 ZCWPW2A0A1B0GU75 182 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 MAGEA13PA6NCF6 341 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.19■□□□□ 0.02
ATG4B-220ENST00000482507 SMIM24O75264 130 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 STK10O94804 968 aaKnown RBP15.19■□□□□ 0.02
ATG4B-220ENST00000482507 FYNP06241 537 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 LYNP07948 512 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 ZCCHC18P0CG32 403 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 CHRM1P11229 460 aaPredicted RBP15.19■□□□□ 0.02
ATG4B-220ENST00000482507 ITGAXP20702 1163 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 PTPN3P26045 913 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 ACLYP53396 1101 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 PGGT1BP53609 377 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 PRMT2P55345 433 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 IRX1P78414 480 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms