RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 TBC1D3HP0C7X1 549 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 EEF1GP26641 437 aaKnown RBP13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 CDH5P33151 784 aaPredicted RBP13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 GABRB2P47870 512 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 CXCR3P49682 368 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 KLK7P49862 253 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 SULT1E1P49888 294 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 CCT8P50990 548 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 CDH4P55283 916 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 CENPCQ03188 943 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 C5orf22Q49AR2 442 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 C2CD6Q53TS8 623 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 SLC45A4Q5BKX6 768 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 BRMS1LQ5PSV4 323 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 ACBD5Q5T8D3 534 aaPredicted RBP13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 FAM46CQ5VWP2 391 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 TBC1D3GQ6DHY5 549 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 TBC1D3CQ6IPX1 549 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 CXorf57Q6NSI4 855 aaKnown RBP13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 TRNP1Q6NT89 227 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 LRRC31Q6UY01 552 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 CLEC17AQ6ZS10 378 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 TBC1D3Q8IZP1 549 aaPredicted RBP13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 MSANTD4Q8NCY6 345 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 OR8D1Q8WZ84 308 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 NPY6RQ99463 290 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 ORAI3Q9BRQ5 295 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 NAA15Q9BXJ9 866 aaKnown RBP13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 STK33Q9BYT3 514 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 TKTL2Q9H0I9 626 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 ARHGEF38Q9NXL2 777 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 VPS28Q9UK41 221 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 TBC1D30Q9Y2I9 924 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 CHD8Q9HCK8 2581 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 AKAP13Q12802 2813 aa13.83□□□□□ -0.2
CTDSP1-208ENST00000482272 KCNK3O14649 394 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 VILLO15195 856 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 TPM2P07951 284 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 UCHL3P15374 230 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 VAV1P15498 845 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 ZNF18P17022 549 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 CD38P28907 300 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 SCNN1AP37088 669 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 CTSKP43235 329 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 CCR5P51681 352 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 KRT83P78385 493 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 DEUP1Q05D60 604 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 DLG2Q15700 870 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 TCP11X2Q5H9J9 407 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 FAM102AQ5T9C2 384 aaPredicted RBP13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 TAF3Q5VWG9 929 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 LAYNQ6UX15 382 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 C14orf80Q86SX3 495 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 PRPF39Q86UA1 669 aaKnown RBP13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 AADATQ8N5Z0 425 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 PNPLA1Q8N8W4 532 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 FRS2Q8WU20 508 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 NT5C3BQ969T7 300 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 ALG14Q96F25 216 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 PGAP3Q96FM1 320 aaPredicted RBP13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 C1orf74Q96LT6 269 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 MUC3BQ9H195 1237 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 KDM4CQ9H3R0 1056 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 AASDHPPTQ9NRN7 309 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 TMPRSS4Q9NRS4 437 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 PIGVQ9NUD9 493 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 FARP1Q9Y4F1 1045 aaPredicted RBP13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 SNX10Q9Y5X0 201 aa13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 MAP1BP46821 2468 aaKnown RBP13.82□□□□□ -0.2
CTDSP1-208ENST00000482272 USP24Q9UPU5 2620 aa13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 C1QTNF3-AMACRE9PGA6 284 aa13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 H0Y8X5 98 aa13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 MCF2LO15068 1137 aa13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 EPHB6O15197 1021 aa13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 ATP9BO43861 1147 aa13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 PCDHGA12O60330 932 aa13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 ADCY5O95622 1261 aa13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 LSM8O95777 96 aaKnown RBP13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 GRK6P43250 576 aa13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 METAP1P53582 386 aa13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 ADPRHP54922 357 aa13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 INAVAQ3KP66 663 aa13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 SLC25A52Q3SY17 297 aa13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 SETD3Q86TU7 594 aaPredicted RBP13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 NOP9Q86U38 636 aaKnown RBP13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 SLCO6A1Q86UG4 719 aa13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 XYLT1Q86Y38 959 aa13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 BAHD1Q8TBE0 780 aaPredicted RBP13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 ENOX1Q8TC92 643 aaKnown RBP13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 ZCCHC14Q8WYQ9 949 aaKnown RBP13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 SLC6A18Q96N87 628 aa13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 GANQ9H2C0 597 aa13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 EBF2Q9HAK2 575 aa13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 TAB2Q9NYJ8 693 aa13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 CACNA1EQ15878 2313 aa13.81□□□□□ -0.2
CTDSP1-208ENST00000482272 ACACBO00763 2458 aa13.8□□□□□ -0.2
CTDSP1-208ENST00000482272 DRGXA6NNA5 263 aa13.8□□□□□ -0.2
CTDSP1-208ENST00000482272 C10orf142B7Z368 130 aa13.8□□□□□ -0.2
CTDSP1-208ENST00000482272 ALOX15BO15296 676 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms